Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

Click here to switch to the map view.

The map label for this gene is yfiP [C]

Identifier: 39998511

GI number: 39998511

Start: 3766924

End: 3767532

Strand: Reverse

Name: yfiP [C]

Synonym: GSU3422

Alternate gene names: 39998511

Gene position: 3767532-3766924 (Counterclockwise)

Preceding gene: 39998512

Following gene: 39998510

Centisome position: 98.78

GC content: 68.64

Gene sequence:

>609_bases
GTGGGTACCAGATCGAAACGGAGCGAGCGCTGTGCGCGGTGCCGCTTGCATATCCACCGGTGCGTCTGCCCGGCTATGCC
GCGGTATTCCCTTGCGACCCGGGTGGTCCTGGTCATGCATCACCGGGAATACCCGAAAACCACGGCTACGGGCCCCCTGG
CCCTGGAGATACTCCCCAACAGCGAACTGCGCATCCACGGGGAGCCGGGCCGTTCCCTGAATCTGAGCGATCTGGACACC
CCGGCGCGGCGCATCCTTCTGCTCTATCCCGGCGACGACGTCCCCGTCTTGGACCGGGAACTGCTGGAACGGGACGGACG
GCCCGTCACACTGGTGGTGCCCGACGGCACCTGGCGCCAGGCGTCCCGCATGGGCCGGCGGTTGCCCGGTCTTGCCCGCG
CCGAGATGGTCCGGCTCCCGCCGGGCCCTCCCACCGAGTGGGGCGTTCGGCGAGAGAATCATCCCCAGGGGCTGGCCACT
TTCGAGGCAATCGCCCGGGCCCTGGGCATCATCGAATCACCCGACGTCCAGTCGGGCATGGAGCACCTGTTCCGCCTCAT
GGTGAGACAGACCCTCGGTGCCCGGGGATGCGCGGTCGACCGGGACTGA

Upstream 100 bases:

>100_bases
CGGCGCTTCGGCCCCGGAAAAGGTACTGGCCGAGCAGTACGGTTTCACCCCTGAGCTGGTTGCCCGGCGTGTGGCCGAGT
TCGTGGAGCGCTGAGACACC

Downstream 100 bases:

>100_bases
AAGGACTTTTCATGGACATCAGGGACATCCTCAGGAAATCGCTTCTCTTTTCCGGCCTGGACGAGAACCACCTGGCCGAA
GTGGCGGCCATTGCCGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: DTW Domain Protein; DTW Domain Containing Protein

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MGTRSKRSERCARCRLHIHRCVCPAMPRYSLATRVVLVMHHREYPKTTATGPLALEILPNSELRIHGEPGRSLNLSDLDT
PARRILLLYPGDDVPVLDRELLERDGRPVTLVVPDGTWRQASRMGRRLPGLARAEMVRLPPGPPTEWGVRRENHPQGLAT
FEAIARALGIIESPDVQSGMEHLFRLMVRQTLGARGCAVDRD

Sequences:

>Translated_202_residues
MGTRSKRSERCARCRLHIHRCVCPAMPRYSLATRVVLVMHHREYPKTTATGPLALEILPNSELRIHGEPGRSLNLSDLDT
PARRILLLYPGDDVPVLDRELLERDGRPVTLVVPDGTWRQASRMGRRLPGLARAEMVRLPPGPPTEWGVRRENHPQGLAT
FEAIARALGIIESPDVQSGMEHLFRLMVRQTLGARGCAVDRD
>Mature_201_residues
GTRSKRSERCARCRLHIHRCVCPAMPRYSLATRVVLVMHHREYPKTTATGPLALEILPNSELRIHGEPGRSLNLSDLDTP
ARRILLLYPGDDVPVLDRELLERDGRPVTLVVPDGTWRQASRMGRRLPGLARAEMVRLPPGPPTEWGVRRENHPQGLATF
EAIARALGIIESPDVQSGMEHLFRLMVRQTLGARGCAVDRD

Specific function: Unknown

COG id: COG3148

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI27734779, Length=175, Percent_Identity=28, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21358337, Length=186, Percent_Identity=28.494623655914, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22671; Mature: 22540

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTRSKRSERCARCRLHIHRCVCPAMPRYSLATRVVLVMHHREYPKTTATGPLALEILPN
CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC
SELRIHGEPGRSLNLSDLDTPARRILLLYPGDDVPVLDRELLERDGRPVTLVVPDGTWRQ
CCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCHHH
ASRMGRRLPGLARAEMVRLPPGPPTEWGVRRENHPQGLATFEAIARALGIIESPDVQSGM
HHHHHHCCCCCCHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH
EHLFRLMVRQTLGARGCAVDRD
HHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GTRSKRSERCARCRLHIHRCVCPAMPRYSLATRVVLVMHHREYPKTTATGPLALEILPN
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC
SELRIHGEPGRSLNLSDLDTPARRILLLYPGDDVPVLDRELLERDGRPVTLVVPDGTWRQ
CCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCHHH
ASRMGRRLPGLARAEMVRLPPGPPTEWGVRRENHPQGLATFEAIARALGIIESPDVQSGM
HHHHHHCCCCCCHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH
EHLFRLMVRQTLGARGCAVDRD
HHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA