| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is yfiP [C]
Identifier: 39998511
GI number: 39998511
Start: 3766924
End: 3767532
Strand: Reverse
Name: yfiP [C]
Synonym: GSU3422
Alternate gene names: 39998511
Gene position: 3767532-3766924 (Counterclockwise)
Preceding gene: 39998512
Following gene: 39998510
Centisome position: 98.78
GC content: 68.64
Gene sequence:
>609_bases GTGGGTACCAGATCGAAACGGAGCGAGCGCTGTGCGCGGTGCCGCTTGCATATCCACCGGTGCGTCTGCCCGGCTATGCC GCGGTATTCCCTTGCGACCCGGGTGGTCCTGGTCATGCATCACCGGGAATACCCGAAAACCACGGCTACGGGCCCCCTGG CCCTGGAGATACTCCCCAACAGCGAACTGCGCATCCACGGGGAGCCGGGCCGTTCCCTGAATCTGAGCGATCTGGACACC CCGGCGCGGCGCATCCTTCTGCTCTATCCCGGCGACGACGTCCCCGTCTTGGACCGGGAACTGCTGGAACGGGACGGACG GCCCGTCACACTGGTGGTGCCCGACGGCACCTGGCGCCAGGCGTCCCGCATGGGCCGGCGGTTGCCCGGTCTTGCCCGCG CCGAGATGGTCCGGCTCCCGCCGGGCCCTCCCACCGAGTGGGGCGTTCGGCGAGAGAATCATCCCCAGGGGCTGGCCACT TTCGAGGCAATCGCCCGGGCCCTGGGCATCATCGAATCACCCGACGTCCAGTCGGGCATGGAGCACCTGTTCCGCCTCAT GGTGAGACAGACCCTCGGTGCCCGGGGATGCGCGGTCGACCGGGACTGA
Upstream 100 bases:
>100_bases CGGCGCTTCGGCCCCGGAAAAGGTACTGGCCGAGCAGTACGGTTTCACCCCTGAGCTGGTTGCCCGGCGTGTGGCCGAGT TCGTGGAGCGCTGAGACACC
Downstream 100 bases:
>100_bases AAGGACTTTTCATGGACATCAGGGACATCCTCAGGAAATCGCTTCTCTTTTCCGGCCTGGACGAGAACCACCTGGCCGAA GTGGCGGCCATTGCCGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: DTW Domain Protein; DTW Domain Containing Protein
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MGTRSKRSERCARCRLHIHRCVCPAMPRYSLATRVVLVMHHREYPKTTATGPLALEILPNSELRIHGEPGRSLNLSDLDT PARRILLLYPGDDVPVLDRELLERDGRPVTLVVPDGTWRQASRMGRRLPGLARAEMVRLPPGPPTEWGVRRENHPQGLAT FEAIARALGIIESPDVQSGMEHLFRLMVRQTLGARGCAVDRD
Sequences:
>Translated_202_residues MGTRSKRSERCARCRLHIHRCVCPAMPRYSLATRVVLVMHHREYPKTTATGPLALEILPNSELRIHGEPGRSLNLSDLDT PARRILLLYPGDDVPVLDRELLERDGRPVTLVVPDGTWRQASRMGRRLPGLARAEMVRLPPGPPTEWGVRRENHPQGLAT FEAIARALGIIESPDVQSGMEHLFRLMVRQTLGARGCAVDRD >Mature_201_residues GTRSKRSERCARCRLHIHRCVCPAMPRYSLATRVVLVMHHREYPKTTATGPLALEILPNSELRIHGEPGRSLNLSDLDTP ARRILLLYPGDDVPVLDRELLERDGRPVTLVVPDGTWRQASRMGRRLPGLARAEMVRLPPGPPTEWGVRRENHPQGLATF EAIARALGIIESPDVQSGMEHLFRLMVRQTLGARGCAVDRD
Specific function: Unknown
COG id: COG3148
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27734779, Length=175, Percent_Identity=28, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI21358337, Length=186, Percent_Identity=28.494623655914, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22671; Mature: 22540
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTRSKRSERCARCRLHIHRCVCPAMPRYSLATRVVLVMHHREYPKTTATGPLALEILPN CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC SELRIHGEPGRSLNLSDLDTPARRILLLYPGDDVPVLDRELLERDGRPVTLVVPDGTWRQ CCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCHHH ASRMGRRLPGLARAEMVRLPPGPPTEWGVRRENHPQGLATFEAIARALGIIESPDVQSGM HHHHHHCCCCCCHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH EHLFRLMVRQTLGARGCAVDRD HHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GTRSKRSERCARCRLHIHRCVCPAMPRYSLATRVVLVMHHREYPKTTATGPLALEILPN CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC SELRIHGEPGRSLNLSDLDTPARRILLLYPGDDVPVLDRELLERDGRPVTLVVPDGTWRQ CCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCHHH ASRMGRRLPGLARAEMVRLPPGPPTEWGVRRENHPQGLATFEAIARALGIIESPDVQSGM HHHHHHCCCCCCHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH EHLFRLMVRQTLGARGCAVDRD HHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA