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The map label for this gene is atoS [C]

Identifier: 39998508

GI number: 39998508

Start: 3762534

End: 3764858

Strand: Reverse

Name: atoS [C]

Synonym: GSU3419

Alternate gene names: 39998508

Gene position: 3764858-3762534 (Counterclockwise)

Preceding gene: 39998510

Following gene: 39998507

Centisome position: 98.71

GC content: 61.89

Gene sequence:

>2325_bases
ATGTTTCGATTGGTGGGATTGCGCTGTTTCGTTTGTGTATTGTCGCGCCTGTGGCCGGTCATTATGCTCGTTGGGGTGTA
TTCCGTTCCGGCAAGCGCCGACTACGAGGCGCGGGCGGCCAACCACATCCTGGTGCTCCATTCCTATCACCCCGGGTATC
CGTGGACCGACCAGGTCATGGCGGGAATCCAGGATGTGCTGTCGAATTCCTTCGAACGGATTCACATGGACGTGGAATAT
CTCGATGTGAAGCGCCACCGGCAGTCCGCCCAGGTTTCCCGCATGTTCGACGCGGTGTTGCACCACAAGCTGCGGCAACG
GTCATTCAATCTGGTGATCGCATCCGGTAACGAGGCGCTCGACTACGCTCTCGCCAATCGTCGTGACCTGTTCCGCGGTG
CACCTATCGTATCCTGCGCAACCGTCGGCCCCGATCCGCTCCCCACCGCCTCGGCCTGGCATACGGGCGTCAGGGCCGAT
CCCGATTTTACGGGAGTCATCAGGCAGGCTCTGGCGCTTCATCCCGGCACGACCAGAATGATCGTCATCGGCGGCACCCG
TGAGCTGACGGATCGCCTTAATACCCAGCGACTCATGGCGGCAAGCCAGGCATTCGCGGGGCGGGTAACGTTCGATTACT
GGAATGACCTGTCGGCCGAGGAGATCATCGCACGACTCCAGTCCCCTGTCCGCGGGGCCGTAATCCTCATCAACGGGTCG
ATTCGCGACCGTTCGGGGAATCTTCTCTCGTTCCACGAGCAGACAGGCCTGCTGCGGCAGGGGGGGCTTCCCCTCTACAG
CTTCTGGAACGTTTTTCTCGGCGAGGGGATCGTGGGGGGGCCGTTCGTGGATGTGCACGAGCAGGGGCGAATTGCCGCGC
GGACGGCACTGCGAGTGCTTCATGGGGAGCCGGTGGCCGATATTCCGGTGGAGCAATCGGTCATCACCGTACCGACCTTT
GACTACGAGGAACTGCAGCGACTCGGGATATCTCCCCGGCACCTGCCGCCAAAGCACATTCTGGTCAACGGACCCAAGCC
GTTCTACAACCTGAGCAAGTCCCAGTTTCTCTGGTCTGTCGCGATTCTGCTCGGCTCCCTGAGCATCACCCTGCTGCTCA
CCTGGAGCATCCTGCTCCGCCGCCGGGCCGAGCTCAGACTGCGCCAGAGCGAGCAGAACTACCGGCAGCTTTCCCGGCAG
TTCGGGATCATTCTGGACGGCATCCCCGACAGTCTCACCCTCATTTCCCACGACATGAAGGTGGTCTGGTCCAACAAGGT
GGCCGGTGATCCCTTTGGGGCGCCGTTGCGGACCGTGCCCGGCGAATACTGTTGCGAGATGCTCTACAACCGCACCACTC
TCTGTGATAACTGTCCGGCGGTGAGGGCTTTCGAGTCGGGCGAGAACGAGGAATCCACCATTACCACGCCCGACGGCAGG
ACCCTTGAGGTGAAGGCATTCCCGGTCAGGGAGGGGTCGGAGACGGTGAGCCACGTCATCATGCTGGCCAGCGACATCTC
CGACAAAGTCCGTCTTCTGGAGGAAACGGTCAGGACGAGCCGGCTCGCATCGCTGGGTGAGCTGGCAGCCGGCGTGGCTC
ACGAGATCAACAACCCCAATGCGGTGATCCTGCTTAACGTGGACCTGGTCAAAAAGGTGTGCCGGGAAGCAATCCCCCTG
CTGCTGGATCGCGTTGACCGGCAGAGCGAGTTGGCGATCGGGGGGATCCCCTGGTCGGAAATGAGCGAGGAGCTGCCACT
CCTGCTGACGGAGATGGAAGAGGGCGCCGGCCGCATCAAGCGGATCGTGGATGACCTCAAGGACTTCGCCCGCGGCGACG
GCGCCGACCAGTGCGAGCCTGTGGACCTGAACGAGGCGGTCCGGGCCTCGGTCCGCTTGGTGGGCAATGCCATTAAAAAT
GCCACCGACCATTTCGCGCTGGAGCTGGCCCCTGGCCTCCCTTCCTTCGAGGGAAGCATCCAACGGATCGAGCAGGTAGT
GGTCAACCTGATCATGAACGCCTGCCAGTCCCTCCAGGACAAAACGAAAGGGATCACCGTCAGCACCGGCTACGACCTTA
TCCATGGGGTCTACACGATTCAGGTGCGCGACGAGGGGCAGGGGATTCCCCCGGAGGTCCTTCCCCGCATCACCGATCCG
TTCTTCACCACAAAGCGCGAAACCGGCGGCACGGGTCTCGGTCTGTCGATCTGCATGCGCATCGTCAGAAGTTATGGCGG
CACACTCGAATTCCAGTCCGTCCCGGGAGCCGGGACAACGGCTACCCTGTCCCTGCCGGCCGAAAAGGAGGTTATTGCCG
CATGA

Upstream 100 bases:

>100_bases
GAAGAGGCCGAACGCTCTGTGGAATAAAAAGTGCTAATAAAGTCTTCTGATTAGATTGTATACATTGATTTAGCGATATT
GTTGCTACTGAGAGAGCTCT

Downstream 100 bases:

>100_bases
GCCCGGAAAAGTACCCCCCCAAGCCCATCCTGCTGGTTGACGATGAGGCTGCGTGGTTGCGCAGCCTGTCGCTCACGCTA
CGGGAAGCCACCGGCATTGA

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 774; Mature: 774

Protein sequence:

>774_residues
MFRLVGLRCFVCVLSRLWPVIMLVGVYSVPASADYEARAANHILVLHSYHPGYPWTDQVMAGIQDVLSNSFERIHMDVEY
LDVKRHRQSAQVSRMFDAVLHHKLRQRSFNLVIASGNEALDYALANRRDLFRGAPIVSCATVGPDPLPTASAWHTGVRAD
PDFTGVIRQALALHPGTTRMIVIGGTRELTDRLNTQRLMAASQAFAGRVTFDYWNDLSAEEIIARLQSPVRGAVILINGS
IRDRSGNLLSFHEQTGLLRQGGLPLYSFWNVFLGEGIVGGPFVDVHEQGRIAARTALRVLHGEPVADIPVEQSVITVPTF
DYEELQRLGISPRHLPPKHILVNGPKPFYNLSKSQFLWSVAILLGSLSITLLLTWSILLRRRAELRLRQSEQNYRQLSRQ
FGIILDGIPDSLTLISHDMKVVWSNKVAGDPFGAPLRTVPGEYCCEMLYNRTTLCDNCPAVRAFESGENEESTITTPDGR
TLEVKAFPVREGSETVSHVIMLASDISDKVRLLEETVRTSRLASLGELAAGVAHEINNPNAVILLNVDLVKKVCREAIPL
LLDRVDRQSELAIGGIPWSEMSEELPLLLTEMEEGAGRIKRIVDDLKDFARGDGADQCEPVDLNEAVRASVRLVGNAIKN
ATDHFALELAPGLPSFEGSIQRIEQVVVNLIMNACQSLQDKTKGITVSTGYDLIHGVYTIQVRDEGQGIPPEVLPRITDP
FFTTKRETGGTGLGLSICMRIVRSYGGTLEFQSVPGAGTTATLSLPAEKEVIAA

Sequences:

>Translated_774_residues
MFRLVGLRCFVCVLSRLWPVIMLVGVYSVPASADYEARAANHILVLHSYHPGYPWTDQVMAGIQDVLSNSFERIHMDVEY
LDVKRHRQSAQVSRMFDAVLHHKLRQRSFNLVIASGNEALDYALANRRDLFRGAPIVSCATVGPDPLPTASAWHTGVRAD
PDFTGVIRQALALHPGTTRMIVIGGTRELTDRLNTQRLMAASQAFAGRVTFDYWNDLSAEEIIARLQSPVRGAVILINGS
IRDRSGNLLSFHEQTGLLRQGGLPLYSFWNVFLGEGIVGGPFVDVHEQGRIAARTALRVLHGEPVADIPVEQSVITVPTF
DYEELQRLGISPRHLPPKHILVNGPKPFYNLSKSQFLWSVAILLGSLSITLLLTWSILLRRRAELRLRQSEQNYRQLSRQ
FGIILDGIPDSLTLISHDMKVVWSNKVAGDPFGAPLRTVPGEYCCEMLYNRTTLCDNCPAVRAFESGENEESTITTPDGR
TLEVKAFPVREGSETVSHVIMLASDISDKVRLLEETVRTSRLASLGELAAGVAHEINNPNAVILLNVDLVKKVCREAIPL
LLDRVDRQSELAIGGIPWSEMSEELPLLLTEMEEGAGRIKRIVDDLKDFARGDGADQCEPVDLNEAVRASVRLVGNAIKN
ATDHFALELAPGLPSFEGSIQRIEQVVVNLIMNACQSLQDKTKGITVSTGYDLIHGVYTIQVRDEGQGIPPEVLPRITDP
FFTTKRETGGTGLGLSICMRIVRSYGGTLEFQSVPGAGTTATLSLPAEKEVIAA
>Mature_774_residues
MFRLVGLRCFVCVLSRLWPVIMLVGVYSVPASADYEARAANHILVLHSYHPGYPWTDQVMAGIQDVLSNSFERIHMDVEY
LDVKRHRQSAQVSRMFDAVLHHKLRQRSFNLVIASGNEALDYALANRRDLFRGAPIVSCATVGPDPLPTASAWHTGVRAD
PDFTGVIRQALALHPGTTRMIVIGGTRELTDRLNTQRLMAASQAFAGRVTFDYWNDLSAEEIIARLQSPVRGAVILINGS
IRDRSGNLLSFHEQTGLLRQGGLPLYSFWNVFLGEGIVGGPFVDVHEQGRIAARTALRVLHGEPVADIPVEQSVITVPTF
DYEELQRLGISPRHLPPKHILVNGPKPFYNLSKSQFLWSVAILLGSLSITLLLTWSILLRRRAELRLRQSEQNYRQLSRQ
FGIILDGIPDSLTLISHDMKVVWSNKVAGDPFGAPLRTVPGEYCCEMLYNRTTLCDNCPAVRAFESGENEESTITTPDGR
TLEVKAFPVREGSETVSHVIMLASDISDKVRLLEETVRTSRLASLGELAAGVAHEINNPNAVILLNVDLVKKVCREAIPL
LLDRVDRQSELAIGGIPWSEMSEELPLLLTEMEEGAGRIKRIVDDLKDFARGDGADQCEPVDLNEAVRASVRLVGNAIKN
ATDHFALELAPGLPSFEGSIQRIEQVVVNLIMNACQSLQDKTKGITVSTGYDLIHGVYTIQVRDEGQGIPPEVLPRITDP
FFTTKRETGGTGLGLSICMRIVRSYGGTLEFQSVPGAGTTATLSLPAEKEVIAA

Specific function: Member Of The Two-Component Regulatory System Atos/Atoc; May Activate Atoc By Phosphorylation. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=390, Percent_Identity=27.6923076923077, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1790436, Length=255, Percent_Identity=33.3333333333333, Blast_Score=105, Evalue=8e-24,
Organism=Escherichia coli, GI145693157, Length=481, Percent_Identity=24.5322245322245, Blast_Score=90, Evalue=5e-19,
Organism=Escherichia coli, GI1790300, Length=385, Percent_Identity=24.9350649350649, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1786600, Length=407, Percent_Identity=23.3415233415233, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI87081816, Length=176, Percent_Identity=27.8409090909091, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1788713, Length=325, Percent_Identity=24.3076923076923, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1789149, Length=181, Percent_Identity=26.5193370165746, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1788393, Length=280, Percent_Identity=23.9285714285714, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001638
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00497 SBP_bac_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 85291; Mature: 85291

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRLVGLRCFVCVLSRLWPVIMLVGVYSVPASADYEARAANHILVLHSYHPGYPWTDQVM
CCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHH
AGIQDVLSNSFERIHMDVEYLDVKRHRQSAQVSRMFDAVLHHKLRQRSFNLVIASGNEAL
HHHHHHHHCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHH
DYALANRRDLFRGAPIVSCATVGPDPLPTASAWHTGVRADPDFTGVIRQALALHPGTTRM
HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEE
IVIGGTRELTDRLNTQRLMAASQAFAGRVTFDYWNDLSAEEIIARLQSPVRGAVILINGS
EEECCCHHHHHHHHHHHHHHHHHHHCCCEEEHHCCCCCHHHHHHHHHCCCCCEEEEEECC
IRDRSGNLLSFHEQTGLLRQGGLPLYSFWNVFLGEGIVGGPFVDVHEQGRIAARTALRVL
CCCCCCCEEEEHHHCCHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHH
HGEPVADIPVEQSVITVPTFDYEELQRLGISPRHLPPKHILVNGPKPFYNLSKSQFLWSV
CCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHH
AILLGSLSITLLLTWSILLRRRAELRLRQSEQNYRQLSRQFGIILDGIPDSLTLISHDMK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHCCEE
VVWSNKVAGDPFGAPLRTVPGEYCCEMLYNRTTLCDNCPAVRAFESGENEESTITTPDGR
EEECCCCCCCCCCCCHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
TLEVKAFPVREGSETVSHVIMLASDISDKVRLLEETVRTSRLASLGELAAGVAHEINNPN
EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AVILLNVDLVKKVCREAIPLLLDRVDRQSELAIGGIPWSEMSEELPLLLTEMEEGAGRIK
EEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHCCHHHHHHHHHHHHHH
RIVDDLKDFARGDGADQCEPVDLNEAVRASVRLVGNAIKNATDHFALELAPGLPSFEGSI
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH
QRIEQVVVNLIMNACQSLQDKTKGITVSTGYDLIHGVYTIQVRDEGQGIPPEVLPRITDP
HHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHCCEEEEEEECCCCCCCHHHHHCCCCC
FFTTKRETGGTGLGLSICMRIVRSYGGTLEFQSVPGAGTTATLSLPAEKEVIAA
CCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEECCCCCHHHCC
>Mature Secondary Structure
MFRLVGLRCFVCVLSRLWPVIMLVGVYSVPASADYEARAANHILVLHSYHPGYPWTDQVM
CCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHH
AGIQDVLSNSFERIHMDVEYLDVKRHRQSAQVSRMFDAVLHHKLRQRSFNLVIASGNEAL
HHHHHHHHCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHH
DYALANRRDLFRGAPIVSCATVGPDPLPTASAWHTGVRADPDFTGVIRQALALHPGTTRM
HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEE
IVIGGTRELTDRLNTQRLMAASQAFAGRVTFDYWNDLSAEEIIARLQSPVRGAVILINGS
EEECCCHHHHHHHHHHHHHHHHHHHCCCEEEHHCCCCCHHHHHHHHHCCCCCEEEEEECC
IRDRSGNLLSFHEQTGLLRQGGLPLYSFWNVFLGEGIVGGPFVDVHEQGRIAARTALRVL
CCCCCCCEEEEHHHCCHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHH
HGEPVADIPVEQSVITVPTFDYEELQRLGISPRHLPPKHILVNGPKPFYNLSKSQFLWSV
CCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHH
AILLGSLSITLLLTWSILLRRRAELRLRQSEQNYRQLSRQFGIILDGIPDSLTLISHDMK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHCCEE
VVWSNKVAGDPFGAPLRTVPGEYCCEMLYNRTTLCDNCPAVRAFESGENEESTITTPDGR
EEECCCCCCCCCCCCHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
TLEVKAFPVREGSETVSHVIMLASDISDKVRLLEETVRTSRLASLGELAAGVAHEINNPN
EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AVILLNVDLVKKVCREAIPLLLDRVDRQSELAIGGIPWSEMSEELPLLLTEMEEGAGRIK
EEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHCCHHHHHHHHHHHHHH
RIVDDLKDFARGDGADQCEPVDLNEAVRASVRLVGNAIKNATDHFALELAPGLPSFEGSI
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH
QRIEQVVVNLIMNACQSLQDKTKGITVSTGYDLIHGVYTIQVRDEGQGIPPEVLPRITDP
HHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHCCEEEEEEECCCCCCCHHHHHCCCCC
FFTTKRETGGTGLGLSICMRIVRSYGGTLEFQSVPGAGTTATLSLPAEKEVIAA
CCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEECCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1333793 [H]