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The map label for this gene is 39998475

Identifier: 39998475

GI number: 39998475

Start: 3723671

End: 3724768

Strand: Reverse

Name: 39998475

Synonym: GSU3386

Alternate gene names: NA

Gene position: 3724768-3723671 (Counterclockwise)

Preceding gene: 39998476

Following gene: 39998473

Centisome position: 97.66

GC content: 59.38

Gene sequence:

>1098_bases
GTGAAATTTCTCAATTCGTTCGTACCGTCCCGCGTTTTCCCTCCCCAGGTGTGTTTTGTCGTTGTTGCCGTTCTTCTTGG
ACTCTCAGGCTGTGCTGATACCGACAAGCCGGTGCCCCAGGCGTCTTCTCCGAAGGACGCAGCCGTAAAGACCGAGACTT
ACAGCAGCGCCGTCCTTCCAGCCCCGGCCCCGGCGTTCACGCCGGCAAGCAGTGCCCGGGCTGCGACACCCGCCGTCAAG
TACACAGCTGGCGAAGATCCCGACTTCGCCCGTCAGTGCGGGTGGCCGGTGAAGTGCCCGCCGACCCTGCCCGGTGCCAT
TCTTCCATCGAAAAGGATAGTTGCCTACTATGGCAACCCACTCTCCAAGCGGATGGGAGCCCTGGGGGCCTATCCGAAGG
ATGAGATGCTTCAGCGTCTCAAGTCCGAGGTGGCGGCGTGGCAGAAAGCGGACCCGTCGCTGCCGGTGCAGCCGGCACTC
CACCTGATCGCCGTCGTGGCGCAGGGGGAGCCGGGCAAGGACGGCAAATACCGGATGGTCATGCCGGATGCGATAGTTAA
CCAGGTGTACGGTTGGGCCCGGGAAGCCAATGCCATTCTGTTCATCGACATCCAGACCGGCCATGATGACATCCGGACGG
TGCTGCCGCGTTTCGAGTGGATTTTGAAGAACCCGGACGTTCACCTGGGAATCGATCCGGAATTCAATCTGATCTCCAGC
AAGGCCAAACCCGGCAAGAAGATCGGAACCTATGACGCGGCTGATATCAACTATGCGTCCGGCTATCTCAAAGATCTGGT
GACCAAGTACAATCTGCCCCCTAAGGTCCTGACGGTCCATCGGTTCACGCGCAACGGGGTTACCAATTCCAAGAAGATCG
TCCTGCGCCCCGAGGTGCAGATCGTGATGCACATGGACGGTTGGGGTGCGCCCTGGCTCAAGCGCGATTCCTACAAAGAT
TACATTGTTTCCGAGCCGGTCCAGTACACTGGCTTCAAGCTGTTCTATCACAACGACACCAAGAAGGGGCATCCCCTGCT
CACCCCCCGGGAGGTGCTCAGGCTGCACCCCCAGCCGATTTATATCCAGTACCAGTAA

Upstream 100 bases:

>100_bases
CATTCCCAATCAGTCATCAATAATGGTATAAGGTACGTAGTTTGTGAGCCACAGAAGTCACCTTCTGTGGCTTTTATTTG
CTACGTCGATGGAGCATTGC

Downstream 100 bases:

>100_bases
CACGCCCCTTTGGCGGACAGGGCAGCCGTCGTTGCTGGTCGCCTGTGAGGCTGAAAGACGAAAAAAGGAGGAGCCGGATG
ATCCCGGCTCCTCCTTTTTC

Product: lipoprotein

Products: NA

Alternate protein names: SH3 Type 3 Domain Protein; LigA Protein

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MKFLNSFVPSRVFPPQVCFVVVAVLLGLSGCADTDKPVPQASSPKDAAVKTETYSSAVLPAPAPAFTPASSARAATPAVK
YTAGEDPDFARQCGWPVKCPPTLPGAILPSKRIVAYYGNPLSKRMGALGAYPKDEMLQRLKSEVAAWQKADPSLPVQPAL
HLIAVVAQGEPGKDGKYRMVMPDAIVNQVYGWAREANAILFIDIQTGHDDIRTVLPRFEWILKNPDVHLGIDPEFNLISS
KAKPGKKIGTYDAADINYASGYLKDLVTKYNLPPKVLTVHRFTRNGVTNSKKIVLRPEVQIVMHMDGWGAPWLKRDSYKD
YIVSEPVQYTGFKLFYHNDTKKGHPLLTPREVLRLHPQPIYIQYQ

Sequences:

>Translated_365_residues
MKFLNSFVPSRVFPPQVCFVVVAVLLGLSGCADTDKPVPQASSPKDAAVKTETYSSAVLPAPAPAFTPASSARAATPAVK
YTAGEDPDFARQCGWPVKCPPTLPGAILPSKRIVAYYGNPLSKRMGALGAYPKDEMLQRLKSEVAAWQKADPSLPVQPAL
HLIAVVAQGEPGKDGKYRMVMPDAIVNQVYGWAREANAILFIDIQTGHDDIRTVLPRFEWILKNPDVHLGIDPEFNLISS
KAKPGKKIGTYDAADINYASGYLKDLVTKYNLPPKVLTVHRFTRNGVTNSKKIVLRPEVQIVMHMDGWGAPWLKRDSYKD
YIVSEPVQYTGFKLFYHNDTKKGHPLLTPREVLRLHPQPIYIQYQ
>Mature_365_residues
MKFLNSFVPSRVFPPQVCFVVVAVLLGLSGCADTDKPVPQASSPKDAAVKTETYSSAVLPAPAPAFTPASSARAATPAVK
YTAGEDPDFARQCGWPVKCPPTLPGAILPSKRIVAYYGNPLSKRMGALGAYPKDEMLQRLKSEVAAWQKADPSLPVQPAL
HLIAVVAQGEPGKDGKYRMVMPDAIVNQVYGWAREANAILFIDIQTGHDDIRTVLPRFEWILKNPDVHLGIDPEFNLISS
KAKPGKKIGTYDAADINYASGYLKDLVTKYNLPPKVLTVHRFTRNGVTNSKKIVLRPEVQIVMHMDGWGAPWLKRDSYKD
YIVSEPVQYTGFKLFYHNDTKKGHPLLTPREVLRLHPQPIYIQYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40391; Mature: 40391

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLNSFVPSRVFPPQVCFVVVAVLLGLSGCADTDKPVPQASSPKDAAVKTETYSSAVLP
CCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
APAPAFTPASSARAATPAVKYTAGEDPDFARQCGWPVKCPPTLPGAILPSKRIVAYYGNP
CCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCC
LSKRMGALGAYPKDEMLQRLKSEVAAWQKADPSLPVQPALHLIAVVAQGEPGKDGKYRMV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEEEEECCCCCCCCCEEEE
MPDAIVNQVYGWAREANAILFIDIQTGHDDIRTVLPRFEWILKNPDVHLGIDPEFNLISS
CCHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHCCC
KAKPGKKIGTYDAADINYASGYLKDLVTKYNLPPKVLTVHRFTRNGVTNSKKIVLRPEVQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCEEEECCCEE
IVMHMDGWGAPWLKRDSYKDYIVSEPVQYTGFKLFYHNDTKKGHPLLTPREVLRLHPQPI
EEEEECCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCE
YIQYQ
EEEEC
>Mature Secondary Structure
MKFLNSFVPSRVFPPQVCFVVVAVLLGLSGCADTDKPVPQASSPKDAAVKTETYSSAVLP
CCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
APAPAFTPASSARAATPAVKYTAGEDPDFARQCGWPVKCPPTLPGAILPSKRIVAYYGNP
CCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCC
LSKRMGALGAYPKDEMLQRLKSEVAAWQKADPSLPVQPALHLIAVVAQGEPGKDGKYRMV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEEEEECCCCCCCCCEEEE
MPDAIVNQVYGWAREANAILFIDIQTGHDDIRTVLPRFEWILKNPDVHLGIDPEFNLISS
CCHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHCCC
KAKPGKKIGTYDAADINYASGYLKDLVTKYNLPPKVLTVHRFTRNGVTNSKKIVLRPEVQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCEEEECCCEE
IVMHMDGWGAPWLKRDSYKDYIVSEPVQYTGFKLFYHNDTKKGHPLLTPREVLRLHPQPI
EEEEECCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCE
YIQYQ
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA