| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is pyk [H]
Identifier: 39998420
GI number: 39998420
Start: 3660079
End: 3661521
Strand: Reverse
Name: pyk [H]
Synonym: GSU3331
Alternate gene names: 39998420
Gene position: 3661521-3660079 (Counterclockwise)
Preceding gene: 39998421
Following gene: 39998419
Centisome position: 96.0
GC content: 64.38
Gene sequence:
>1443_bases ATGGATACACTGTCACGCAAAACCAAGATCATCGCCACTCTGGGGCCCGTCAGCTCCTCGCCCGACATGATCCGGCAGCT GATGGACGCAGGAGTCGATGTCTTCCGGCTCAACTTTTCCCACGGCTCCAACGACCAGCGGCGGGAGGTAATCGCCGCCA TCCGGCGTCTTTCCGCCGAACGGGGCAAGGAGATAGGCATTCTGGCCGATCTCCAGGGGCCCAAGATCAGGACCGGCAGG ATGGAGAACGGTGCCATTCCGCTGGTGCGGGGCGACTCGCTCGACATTACCACCGATGAGGTCCTGGGGCGCCCCGGTCT CATTTCCACCATCTACCAGTCTCTCCCCCACGACGTGAAGCCCGGCTCACGCATCCTGCTGGACGACGGCCTTATCGAGT TGCGGGTCCAGTCCGTGTCCGGCGCCACGGTCCGTTGCACCGTGGTCCAGGGGGGCATGCTCAAGGATCTGAAAGGGATC AACCTCCCCGGCGTCAAGGTTTCTGCGCCGTCGCTGTCGGAGAAGGACCTCCGCGATCTGGATTTCTGCCTGGAGGTGGG GGTCGACTACATTGCCCTGTCCTTTGTCCGCACTGCCGCCGACGTGGAGGGGCTGAAGCGGATCCTCTTCGAACGGGACG TCCAGGTGCCGGTGGTGGCCAAGATCGAGAAGCCCGAGGCCCTGCGCAACTTCAAAAGCATCCTCAAGGTTGCCGATGCG GTCATGGTGGCCCGGGGCGATCTGGGGGTGGAAATCAGCCCGGAAAAGGTCCCCCTGTTCCAGAAAAAGATCATCCGGGC CTGCAACGAGGCCGGCAAACCGGTGATCACCGCCACCCAGATGCTTGAATCCATGATTAGCCATCCGCGCCCCACCCGGG CCGAGACCTCGGACGTGGCCAACGCCATCCTCGACGGAACCGATGCGGTCATGCTCTCGGGTGAGACCGCCTCGGGGCAG TTTCCCCTGGAAGCGGTGCGTACCATGGACAAGGTGGCCCTCGACGTTGAGCGCTTCGCTCAGGTGGAGGACGGCTCGGG GCCACGCCGCCACAGCGTCAGCATCGCCGAGGCGGTGGCCGAGGCCGCCTGCCACGCTGCCGTCATTCTGAAGGCGAAGG CCGTGGCCTGCATGACCCAGTCGGGGAGCACGGCTGCCCGCATCTCACGCTACCGGCCTCCGCTGCCGATCCTCGCCTTC ACCGGTTCGGTGGACACCATGCGACGGCTGTCGCTCTACTGGGGAGTCAAGGCATACCCCATCGGCACCATGGCCGGCAC CGACGAGCAGATAGTGGCCGTGGAGTCGACGCTCCTGTCCGGTGGCTACCGCAAGGGCGACGTGGTGGTCATCACCATGG GTGTGCCGGTGGAGGCCCGGGGGTCCACCAACCTCATGAAGGTCCACAAGCTGGGAACCGGCCAGTTCTTCGAGATATTT TGA
Upstream 100 bases:
>100_bases AGGTGGACGAACTTCCCTGCTTCGAGTGCCACAAGTCTCCGAGTCCGGCCCATAAGGGACGGGTCGGCAAATTCCACCAC TGACGCCTATGCCGAAGCCC
Downstream 100 bases:
>100_bases GCCCGTCCCTGCGATTTGCCGCCGGTTGAAGGAGGAACGCTGATGCGCAAGGTGTTCGACGAGACCAAGATCAACCACAT GGTGCTTGCCAACCGCCTCG
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MDTLSRKTKIIATLGPVSSSPDMIRQLMDAGVDVFRLNFSHGSNDQRREVIAAIRRLSAERGKEIGILADLQGPKIRTGR MENGAIPLVRGDSLDITTDEVLGRPGLISTIYQSLPHDVKPGSRILLDDGLIELRVQSVSGATVRCTVVQGGMLKDLKGI NLPGVKVSAPSLSEKDLRDLDFCLEVGVDYIALSFVRTAADVEGLKRILFERDVQVPVVAKIEKPEALRNFKSILKVADA VMVARGDLGVEISPEKVPLFQKKIIRACNEAGKPVITATQMLESMISHPRPTRAETSDVANAILDGTDAVMLSGETASGQ FPLEAVRTMDKVALDVERFAQVEDGSGPRRHSVSIAEAVAEAACHAAVILKAKAVACMTQSGSTAARISRYRPPLPILAF TGSVDTMRRLSLYWGVKAYPIGTMAGTDEQIVAVESTLLSGGYRKGDVVVITMGVPVEARGSTNLMKVHKLGTGQFFEIF
Sequences:
>Translated_480_residues MDTLSRKTKIIATLGPVSSSPDMIRQLMDAGVDVFRLNFSHGSNDQRREVIAAIRRLSAERGKEIGILADLQGPKIRTGR MENGAIPLVRGDSLDITTDEVLGRPGLISTIYQSLPHDVKPGSRILLDDGLIELRVQSVSGATVRCTVVQGGMLKDLKGI NLPGVKVSAPSLSEKDLRDLDFCLEVGVDYIALSFVRTAADVEGLKRILFERDVQVPVVAKIEKPEALRNFKSILKVADA VMVARGDLGVEISPEKVPLFQKKIIRACNEAGKPVITATQMLESMISHPRPTRAETSDVANAILDGTDAVMLSGETASGQ FPLEAVRTMDKVALDVERFAQVEDGSGPRRHSVSIAEAVAEAACHAAVILKAKAVACMTQSGSTAARISRYRPPLPILAF TGSVDTMRRLSLYWGVKAYPIGTMAGTDEQIVAVESTLLSGGYRKGDVVVITMGVPVEARGSTNLMKVHKLGTGQFFEIF >Mature_480_residues MDTLSRKTKIIATLGPVSSSPDMIRQLMDAGVDVFRLNFSHGSNDQRREVIAAIRRLSAERGKEIGILADLQGPKIRTGR MENGAIPLVRGDSLDITTDEVLGRPGLISTIYQSLPHDVKPGSRILLDDGLIELRVQSVSGATVRCTVVQGGMLKDLKGI NLPGVKVSAPSLSEKDLRDLDFCLEVGVDYIALSFVRTAADVEGLKRILFERDVQVPVVAKIEKPEALRNFKSILKVADA VMVARGDLGVEISPEKVPLFQKKIIRACNEAGKPVITATQMLESMISHPRPTRAETSDVANAILDGTDAVMLSGETASGQ FPLEAVRTMDKVALDVERFAQVEDGSGPRRHSVSIAEAVAEAACHAAVILKAKAVACMTQSGSTAARISRYRPPLPILAF TGSVDTMRRLSLYWGVKAYPIGTMAGTDEQIVAVESTLLSGGYRKGDVVVITMGVPVEARGSTNLMKVHKLGTGQFFEIF
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PEP- utilizing enzyme family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=490, Percent_Identity=39.5918367346939, Blast_Score=328, Evalue=1e-89, Organism=Homo sapiens, GI33286420, Length=490, Percent_Identity=39.5918367346939, Blast_Score=328, Evalue=1e-89, Organism=Homo sapiens, GI10835121, Length=487, Percent_Identity=41.2731006160164, Blast_Score=327, Evalue=2e-89, Organism=Homo sapiens, GI32967597, Length=487, Percent_Identity=41.2731006160164, Blast_Score=326, Evalue=2e-89, Organism=Homo sapiens, GI33286418, Length=487, Percent_Identity=39.4250513347023, Blast_Score=318, Evalue=5e-87, Organism=Homo sapiens, GI310128732, Length=288, Percent_Identity=38.8888888888889, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI310128730, Length=288, Percent_Identity=38.8888888888889, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI310128736, Length=237, Percent_Identity=34.1772151898734, Blast_Score=146, Evalue=3e-35, Organism=Homo sapiens, GI310128734, Length=237, Percent_Identity=34.1772151898734, Blast_Score=146, Evalue=3e-35, Organism=Homo sapiens, GI310128738, Length=215, Percent_Identity=33.4883720930233, Blast_Score=127, Evalue=2e-29, Organism=Escherichia coli, GI1787965, Length=472, Percent_Identity=42.7966101694915, Blast_Score=347, Evalue=1e-96, Organism=Escherichia coli, GI1788160, Length=477, Percent_Identity=40.041928721174, Blast_Score=305, Evalue=4e-84, Organism=Caenorhabditis elegans, GI17544584, Length=483, Percent_Identity=40.5797101449275, Blast_Score=336, Evalue=2e-92, Organism=Caenorhabditis elegans, GI17506829, Length=487, Percent_Identity=41.0677618069815, Blast_Score=309, Evalue=2e-84, Organism=Caenorhabditis elegans, GI71984413, Length=487, Percent_Identity=41.0677618069815, Blast_Score=309, Evalue=2e-84, Organism=Caenorhabditis elegans, GI71984406, Length=487, Percent_Identity=41.0677618069815, Blast_Score=309, Evalue=3e-84, Organism=Caenorhabditis elegans, GI17506831, Length=487, Percent_Identity=41.0677618069815, Blast_Score=308, Evalue=4e-84, Organism=Saccharomyces cerevisiae, GI6319279, Length=481, Percent_Identity=39.0852390852391, Blast_Score=291, Evalue=1e-79, Organism=Saccharomyces cerevisiae, GI6324923, Length=424, Percent_Identity=40.5660377358491, Blast_Score=279, Evalue=6e-76, Organism=Drosophila melanogaster, GI24648964, Length=430, Percent_Identity=43.2558139534884, Blast_Score=324, Evalue=7e-89, Organism=Drosophila melanogaster, GI28571814, Length=430, Percent_Identity=43.2558139534884, Blast_Score=324, Evalue=9e-89, Organism=Drosophila melanogaster, GI24648966, Length=406, Percent_Identity=42.3645320197044, Blast_Score=292, Evalue=4e-79, Organism=Drosophila melanogaster, GI24581235, Length=424, Percent_Identity=36.3207547169811, Blast_Score=264, Evalue=1e-70, Organism=Drosophila melanogaster, GI24646914, Length=275, Percent_Identity=39.2727272727273, Blast_Score=182, Evalue=6e-46,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51684; Mature: 51684
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTLSRKTKIIATLGPVSSSPDMIRQLMDAGVDVFRLNFSHGSNDQRREVIAAIRRLSAE CCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH RGKEIGILADLQGPKIRTGRMENGAIPLVRGDSLDITTDEVLGRPGLISTIYQSLPHDVK CCCCEEEEEECCCCCEECCCCCCCCEEEEECCCCCCCHHHHCCCCCHHHHHHHHCCCCCC PGSRILLDDGLIELRVQSVSGATVRCTVVQGGMLKDLKGINLPGVKVSAPSLSEKDLRDL CCCEEEEECCEEEEEEEECCCCEEEEEEECCCCHHHHCCCCCCCCEEECCCCCHHHHHHH DFCLEVGVDYIALSFVRTAADVEGLKRILFERDVQVPVVAKIEKPEALRNFKSILKVADA HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHH VMVARGDLGVEISPEKVPLFQKKIIRACNEAGKPVITATQMLESMISHPRPTRAETSDVA HHEECCCCCCEECCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCHHHHH NAILDGTDAVMLSGETASGQFPLEAVRTMDKVALDVERFAQVEDGSGPRRHSVSIAEAVA HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH EAACHAAVILKAKAVACMTQSGSTAARISRYRPPLPILAFTGSVDTMRRLSLYWGVKAYP HHHHHHHHHHHHHHHEEEECCCCHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCEEEE IGTMAGTDEQIVAVESTLLSGGYRKGDVVVITMGVPVEARGSTNLMKVHKLGTGQFFEIF CCCCCCCCCEEEEEHHHHHCCCCCCCCEEEEEECCCEECCCCCCEEEEEECCCCCEEEEC >Mature Secondary Structure MDTLSRKTKIIATLGPVSSSPDMIRQLMDAGVDVFRLNFSHGSNDQRREVIAAIRRLSAE CCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH RGKEIGILADLQGPKIRTGRMENGAIPLVRGDSLDITTDEVLGRPGLISTIYQSLPHDVK CCCCEEEEEECCCCCEECCCCCCCCEEEEECCCCCCCHHHHCCCCCHHHHHHHHCCCCCC PGSRILLDDGLIELRVQSVSGATVRCTVVQGGMLKDLKGINLPGVKVSAPSLSEKDLRDL CCCEEEEECCEEEEEEEECCCCEEEEEEECCCCHHHHCCCCCCCCEEECCCCCHHHHHHH DFCLEVGVDYIALSFVRTAADVEGLKRILFERDVQVPVVAKIEKPEALRNFKSILKVADA HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHH VMVARGDLGVEISPEKVPLFQKKIIRACNEAGKPVITATQMLESMISHPRPTRAETSDVA HHEECCCCCCEECCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCHHHHH NAILDGTDAVMLSGETASGQFPLEAVRTMDKVALDVERFAQVEDGSGPRRHSVSIAEAVA HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH EAACHAAVILKAKAVACMTQSGSTAARISRYRPPLPILAFTGSVDTMRRLSLYWGVKAYP HHHHHHHHHHHHHHHEEEECCCCHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCEEEE IGTMAGTDEQIVAVESTLLSGGYRKGDVVVITMGVPVEARGSTNLMKVHKLGTGQFFEIF CCCCCCCCCEEEEEHHHHHCCCCCCCCEEEEEECCCEECCCCCCEEEEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8436141; 1447787 [H]