Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

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The map label for this gene is 39998378

Identifier: 39998378

GI number: 39998378

Start: 3608359

End: 3608856

Strand: Direct

Name: 39998378

Synonym: GSU3289

Alternate gene names: NA

Gene position: 3608359-3608856 (Clockwise)

Preceding gene: 39998377

Following gene: 39998381

Centisome position: 94.6

GC content: 54.42

Gene sequence:

>498_bases
ATGGGTAAGGAATATTCGGTACAGGAAGCTCTTAAGCTGGCAATCAAGGGTGAAAAGGACAGCATGGACTTCTACCGCAA
GGCAGCGACCGTTACCAAGAATGAGCGGGCCAGGAAAGTCTTCGACCTGCTCGCCAATGAAGAAGTCGGCCACCTCAAGG
CATTCTTCGACCACTACAAGGGGGGCGATTTCGGCGACATCACCGTCTACATGGCCCAGCCGGTCGACACCAAGAATCCG
ACCTACATGGCGCTCGTGAAGGCCATCGACGAAGAAACCCACGAGCAGAAAGCGCTCGAAATCGCCCTGAAAGAGGAAAA
GGCCTGCATCGACCAGTACACCGTCCTTGCCAAGGACATTATCGATCCCTTGGTCAAGGGAATCTTCCAACAGGTCATCA
AGGAGACGGAAAAGCATCTGGCGCTGATCGAGGAGGAGTATCGGCACGTCATGACCATGGTCCACGAATCGGACCAGGAC
ACGTACGTGCGGGAATAA

Upstream 100 bases:

>100_bases
GAGCCCCGTTGAAAATTGCGTTGACCGGTTGAACGGCGCACAAGTGCCGCTATACTGTGTTTACACAATCGATATGATGG
GATGAAAGGAGGAATACTTC

Downstream 100 bases:

>100_bases
TCGAAGAGAACACCGGCGTTCTTTACCATCATGAAAAGAGCGGCCCCGCATCGAGGGGTCGCTCTTTTCGCGTCATGAAT
TCGTGCGGGCCAAGCTCACG

Product: hypothetical protein

Products: NA

Alternate protein names: Ferritin-Like Domain-Containing Protein

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MGKEYSVQEALKLAIKGEKDSMDFYRKAATVTKNERARKVFDLLANEEVGHLKAFFDHYKGGDFGDITVYMAQPVDTKNP
TYMALVKAIDEETHEQKALEIALKEEKACIDQYTVLAKDIIDPLVKGIFQQVIKETEKHLALIEEEYRHVMTMVHESDQD
TYVRE

Sequences:

>Translated_165_residues
MGKEYSVQEALKLAIKGEKDSMDFYRKAATVTKNERARKVFDLLANEEVGHLKAFFDHYKGGDFGDITVYMAQPVDTKNP
TYMALVKAIDEETHEQKALEIALKEEKACIDQYTVLAKDIIDPLVKGIFQQVIKETEKHLALIEEEYRHVMTMVHESDQD
TYVRE
>Mature_164_residues
GKEYSVQEALKLAIKGEKDSMDFYRKAATVTKNERARKVFDLLANEEVGHLKAFFDHYKGGDFGDITVYMAQPVDTKNPT
YMALVKAIDEETHEQKALEIALKEEKACIDQYTVLAKDIIDPLVKGIFQQVIKETEKHLALIEEEYRHVMTMVHESDQDT
YVRE

Specific function: Unknown

COG id: COG1633

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19004; Mature: 18873

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKEYSVQEALKLAIKGEKDSMDFYRKAATVTKNERARKVFDLLANEEVGHLKAFFDHYK
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
GGDFGDITVYMAQPVDTKNPTYMALVKAIDEETHEQKALEIALKEEKACIDQYTVLAKDI
CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDPLVKGIFQQVIKETEKHLALIEEEYRHVMTMVHESDQDTYVRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GKEYSVQEALKLAIKGEKDSMDFYRKAATVTKNERARKVFDLLANEEVGHLKAFFDHYK
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
GGDFGDITVYMAQPVDTKNPTYMALVKAIDEETHEQKALEIALKEEKACIDQYTVLAKDI
CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDPLVKGIFQQVIKETEKHLALIEEEYRHVMTMVHESDQDTYVRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA