| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39998292
Identifier: 39998292
GI number: 39998292
Start: 3509017
End: 3509829
Strand: Direct
Name: 39998292
Synonym: GSU3202
Alternate gene names: NA
Gene position: 3509017-3509829 (Clockwise)
Preceding gene: 39998291
Following gene: 39998293
Centisome position: 92.0
GC content: 62.48
Gene sequence:
>813_bases ATGAAGGGGCTCAGACTCCTGGCGGCGATCATGGCGGTCGCCCTGCTTCCATTGACGGTCATGGCCGCGCCAGGCCCGGT GAATGTCGGGCTTCAGGACGTGATCGACACCGTGGAAAAAACATTCAGGCCAAACCGGACTTCGGGAATGCCCCCCCTCG TTTCGGTGACGGCCGACTTTTTCCAGCGCTCGACCCTGGCGGCCCAGAACCGCGAGATGCGGGCCGACGGCCAGATGTTC TTCAGGCCCGCCACGAGCCGGGAACCGCTCATGTTCCGGTTCGATTACTTCCGCCCCCTGAGACACGAGATCGTCAGCAA CGGCCGGACCCTCTGGACCTACCTCCCCGAAAACCGCCAGGTAATCGTGAGCGATGTTTCGCCGGTCTTCAACCCCTACA CCTTCGACCCTGAGCGCAACCAGGCGTCCAACTTCCTCCAGGGGCTCGGCCGGATATCCAAAGATTTTCTCGTCGTCTTC TCACCCCAGGGGAGGGACATCGGGGGCAATTACGTGTTGGAACTGACGCCGCGCCGGGCAACGGCAACCATCGCCAGGCT CTACATGGCGGTCAACGGCGAGGCGGTGGCAAACTATGTCCGCAGCGGCAGGAGGATTGCCGACAGCATTGCATCCCTCG GCCGCCAGGAGTGGACGTTTCCCATCCTTTCCACCACCGTGGTGGACCACCAGGGAAACACCACGATCATCGAATTCAGC AACGCCCGGACGAACATCCTCTTGAGCGAGTCGCTCTTCACCTTCGCCATCCCGCCGGGAGTTCAGGTGGTTCAACCGCC CCAGCGGCGCTGA
Upstream 100 bases:
>100_bases CAATACGGTAACAGGAGTCATCACGGTGCGGGCGCTGCAGCGTCCCATCAAGCGCATGTGATCGCACGGTCCGGACGCCG GCGGGCAACGGAGAGGTGAT
Downstream 100 bases:
>100_bases CCCCGAATCTGGCTCAGGCGAGGGCGGCGTGACATATGCCGCCTCGCCCTTTTCAATCGCGTCATCCTTTGAACAGAACG AGGACCGGAACATGACTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Lipoprotein-Sorting Protein; Outer Membrane Lipoprotein Carrier Protein; Outer Membrane Lipoprotein Carrier/Sorting Protein LolA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MKGLRLLAAIMAVALLPLTVMAAPGPVNVGLQDVIDTVEKTFRPNRTSGMPPLVSVTADFFQRSTLAAQNREMRADGQMF FRPATSREPLMFRFDYFRPLRHEIVSNGRTLWTYLPENRQVIVSDVSPVFNPYTFDPERNQASNFLQGLGRISKDFLVVF SPQGRDIGGNYVLELTPRRATATIARLYMAVNGEAVANYVRSGRRIADSIASLGRQEWTFPILSTTVVDHQGNTTIIEFS NARTNILLSESLFTFAIPPGVQVVQPPQRR
Sequences:
>Translated_270_residues MKGLRLLAAIMAVALLPLTVMAAPGPVNVGLQDVIDTVEKTFRPNRTSGMPPLVSVTADFFQRSTLAAQNREMRADGQMF FRPATSREPLMFRFDYFRPLRHEIVSNGRTLWTYLPENRQVIVSDVSPVFNPYTFDPERNQASNFLQGLGRISKDFLVVF SPQGRDIGGNYVLELTPRRATATIARLYMAVNGEAVANYVRSGRRIADSIASLGRQEWTFPILSTTVVDHQGNTTIIEFS NARTNILLSESLFTFAIPPGVQVVQPPQRR >Mature_270_residues MKGLRLLAAIMAVALLPLTVMAAPGPVNVGLQDVIDTVEKTFRPNRTSGMPPLVSVTADFFQRSTLAAQNREMRADGQMF FRPATSREPLMFRFDYFRPLRHEIVSNGRTLWTYLPENRQVIVSDVSPVFNPYTFDPERNQASNFLQGLGRISKDFLVVF SPQGRDIGGNYVLELTPRRATATIARLYMAVNGEAVANYVRSGRRIADSIASLGRQEWTFPILSTTVVDHQGNTTIIEFS NARTNILLSESLFTFAIPPGVQVVQPPQRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30191; Mature: 30191
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGLRLLAAIMAVALLPLTVMAAPGPVNVGLQDVIDTVEKTFRPNRTSGMPPLVSVTADF CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH FQRSTLAAQNREMRADGQMFFRPATSREPLMFRFDYFRPLRHEIVSNGRTLWTYLPENRQ HHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCEEEEECCCCCE VIVSDVSPVFNPYTFDPERNQASNFLQGLGRISKDFLVVFSPQGRDIGGNYVLELTPRRA EEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCHH TATIARLYMAVNGEAVANYVRSGRRIADSIASLGRQEWTFPILSTTVVDHQGNTTIIEFS HHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEEEEC NARTNILLSESLFTFAIPPGVQVVQPPQRR CCCEEEEEECCEEEEECCCCCEECCCCCCC >Mature Secondary Structure MKGLRLLAAIMAVALLPLTVMAAPGPVNVGLQDVIDTVEKTFRPNRTSGMPPLVSVTADF CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH FQRSTLAAQNREMRADGQMFFRPATSREPLMFRFDYFRPLRHEIVSNGRTLWTYLPENRQ HHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCEEEEECCCCCE VIVSDVSPVFNPYTFDPERNQASNFLQGLGRISKDFLVVFSPQGRDIGGNYVLELTPRRA EEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCHH TATIARLYMAVNGEAVANYVRSGRRIADSIASLGRQEWTFPILSTTVVDHQGNTTIIEFS HHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEEEEC NARTNILLSESLFTFAIPPGVQVVQPPQRR CCCEEEEEECCEEEEECCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA