| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is epsM [H]
Identifier: 39998111
GI number: 39998111
Start: 3314633
End: 3315748
Strand: Direct
Name: epsM [H]
Synonym: GSU3020
Alternate gene names: 39998111
Gene position: 3314633-3315748 (Clockwise)
Preceding gene: 39998110
Following gene: 39998112
Centisome position: 86.9
GC content: 49.37
Gene sequence:
>1116_bases ATGATGAAAACAATGGACATAATCATTCCCAGAGAATTTGTCAGCGACGACCAGTACCTGCTCCAGAAACTCTGTGTCGT GAACAATGACTTTGTAAAAGAAGGAGAGATACTTGCCCTGATCGAATCATCAAAATCTGTCATTGACGTTACGAGTCCGG CTGATGGCTATGTCTATTTTTTCTCTGACGAAGGAGACATTGTGAGTGTCGGCGAGAGGTTGGCCTTGCTCGCATCAACC AAGGAGGCATTACAGGTTGAAATAGAGAATTCCAACAAGAACTCTCAGCGTCGCAAGGAGAGTGAGACAAAGAGCGAGGA CGTTTCATTGTCTGGCGTGAGGTGCTCCAAGAAGGCATTGCTTCTGATGAAACAGCACAATATCGATGTAGGAGCATTTG ATGGTCTCGGGATGGTTACGGCGCAGGACGTAGAGCACTATCTCTCCAGCAGGGAAAAAGCCGTTAAAGCGACAGTAGCT CCATCTTCCGTAAATAGGCAGAAAATCATCATCCTTGGTGGCGGAGGACATTCAAAAGTATGCATAGACATACTGCGCCA GGCACAATCTTTCACAATCGCAGGAATTCTCGACTCTATCCAGGACATTGGCGCAGAAGTGCTGGGAATCCCGGTCATTG GAAGAGACACAATGCCGGAACTACTCAAGACCAGAGAGAGTGGCATCTCCCTTGCGGTTAACGGGATTGGACTCATTCCG GATCACCGGAACAGATGCAAGCTTTTTGAGAGGCTATTGGAGGCCGGCTTTCATCTCCCTAACCTCATACACCCCAAGGC ATCAATCGAACCTTCGGCAAAACTCGGCGAAGGGAACCAGATCATGGCAGGAGCCATTATCGGGAGCGATGTCACAGTAG GAAACTACTGTCTCATAAACTCGGGAGTCGTCGTCTCGCACGACTGTATCATCGACGACCACGTCCACCTGGCCCCCGGT GCGCTGCTTGCAGGAGCAGTCAGAGTTGGAAGAAACTCTTTGATCGGCATGGGCGTTACAATCTACGCAAAAGTAACAAT AGGAAGCAACGTAGTTATAGCCAACGGCGCCAACGTGTTTCACGATGTGCCGGACAACACCGTCGTCAAGATTTGA
Upstream 100 bases:
>100_bases GTATCGGTTACGACTCTACCATTCCATCATCAGCCAGCCGTGAATCCAGATTGATAACAAATGCCGAATCAATCTTTGAA CGTATTGTGGAGATTTTCAA
Downstream 100 bases:
>100_bases CGTAATGGTTGCCAAATGAATATGAACCCTAATGCAAGTTTCGACAATATGACTGAATCCAGCGCCCCCCCTTCATTCAA GGAAAAACTCCACGTTGGGC
Product: hexapeptide transferase
Products: CoA; acetylmaltose [C]
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MMKTMDIIIPREFVSDDQYLLQKLCVVNNDFVKEGEILALIESSKSVIDVTSPADGYVYFFSDEGDIVSVGERLALLAST KEALQVEIENSNKNSQRRKESETKSEDVSLSGVRCSKKALLLMKQHNIDVGAFDGLGMVTAQDVEHYLSSREKAVKATVA PSSVNRQKIIILGGGGHSKVCIDILRQAQSFTIAGILDSIQDIGAEVLGIPVIGRDTMPELLKTRESGISLAVNGIGLIP DHRNRCKLFERLLEAGFHLPNLIHPKASIEPSAKLGEGNQIMAGAIIGSDVTVGNYCLINSGVVVSHDCIIDDHVHLAPG ALLAGAVRVGRNSLIGMGVTIYAKVTIGSNVVIANGANVFHDVPDNTVVKI
Sequences:
>Translated_371_residues MMKTMDIIIPREFVSDDQYLLQKLCVVNNDFVKEGEILALIESSKSVIDVTSPADGYVYFFSDEGDIVSVGERLALLAST KEALQVEIENSNKNSQRRKESETKSEDVSLSGVRCSKKALLLMKQHNIDVGAFDGLGMVTAQDVEHYLSSREKAVKATVA PSSVNRQKIIILGGGGHSKVCIDILRQAQSFTIAGILDSIQDIGAEVLGIPVIGRDTMPELLKTRESGISLAVNGIGLIP DHRNRCKLFERLLEAGFHLPNLIHPKASIEPSAKLGEGNQIMAGAIIGSDVTVGNYCLINSGVVVSHDCIIDDHVHLAPG ALLAGAVRVGRNSLIGMGVTIYAKVTIGSNVVIANGANVFHDVPDNTVVKI >Mature_371_residues MMKTMDIIIPREFVSDDQYLLQKLCVVNNDFVKEGEILALIESSKSVIDVTSPADGYVYFFSDEGDIVSVGERLALLAST KEALQVEIENSNKNSQRRKESETKSEDVSLSGVRCSKKALLLMKQHNIDVGAFDGLGMVTAQDVEHYLSSREKAVKATVA PSSVNRQKIIILGGGGHSKVCIDILRQAQSFTIAGILDSIQDIGAEVLGIPVIGRDTMPELLKTRESGISLAVNGIGLIP DHRNRCKLFERLLEAGFHLPNLIHPKASIEPSAKLGEGNQIMAGAIIGSDVTVGNYCLINSGVVVSHDCIIDDHVHLAPG ALLAGAVRVGRNSLIGMGVTIYAKVTIGSNVVIANGANVFHDVPDNTVVKI
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018357 - InterPro: IPR013817 - InterPro: IPR020019 - InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: 2.3.1.79 [C]
Molecular weight: Translated: 39790; Mature: 39790
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: PS00101 HEXAPEP_TRANSFERASES ; PS50968 BIOTINYL_LIPOYL ; PS00189 LIPOYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKTMDIIIPREFVSDDQYLLQKLCVVNNDFVKEGEILALIESSKSVIDVTSPADGYVYF CCCCEEEEECHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEE FSDEGDIVSVGERLALLASTKEALQVEIENSNKNSQRRKESETKSEDVSLSGVRCSKKAL ECCCCCEEEHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHCCCCCCEEECCEECCCEE LLMKQHNIDVGAFDGLGMVTAQDVEHYLSSREKAVKATVAPSSVNRQKIIILGGGGHSKV EEEEECCCCEECCCCCCCEEHHHHHHHHHCHHHHEEEEECCCCCCCEEEEEEECCCCCHH CIDILRQAQSFTIAGILDSIQDIGAEVLGIPVIGRDTMPELLKTRESGISLAVNGIGLIP HHHHHHHHHCEEHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEECEEECC DHRNRCKLFERLLEAGFHLPNLIHPKASIEPSAKLGEGNQIMAGAIIGSDVTVGNYCLIN CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEECCEEEEE SGVVVSHDCIIDDHVHLAPGALLAGAVRVGRNSLIGMGVTIYAKVTIGSNVVIANGANVF CCEEEEECEEEECCCEECCCHHHHHHHHHCCCCEEECCEEEEEEEEECCEEEEECCCCEE HDVPDNTVVKI ECCCCCCEEEC >Mature Secondary Structure MMKTMDIIIPREFVSDDQYLLQKLCVVNNDFVKEGEILALIESSKSVIDVTSPADGYVYF CCCCEEEEECHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEE FSDEGDIVSVGERLALLASTKEALQVEIENSNKNSQRRKESETKSEDVSLSGVRCSKKAL ECCCCCEEEHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHCCCCCCEEECCEECCCEE LLMKQHNIDVGAFDGLGMVTAQDVEHYLSSREKAVKATVAPSSVNRQKIIILGGGGHSKV EEEEECCCCEECCCCCCCEEHHHHHHHHHCHHHHEEEEECCCCCCCEEEEEEECCCCCHH CIDILRQAQSFTIAGILDSIQDIGAEVLGIPVIGRDTMPELLKTRESGISLAVNGIGLIP HHHHHHHHHCEEHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEECEEECC DHRNRCKLFERLLEAGFHLPNLIHPKASIEPSAKLGEGNQIMAGAIIGSDVTVGNYCLIN CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEECCEEEEE SGVVVSHDCIIDDHVHLAPGALLAGAVRVGRNSLIGMGVTIYAKVTIGSNVVIANGANVF CCEEEEECEEEECCCEECCCHHHHHHHHHCCCCEEECCEEEEEEEEECCEEEEECCCCEE HDVPDNTVVKI ECCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: 0.20 {glucose} 0.11 {maltose}
Km value (mM): 90 {maltose}} 62 {glucose}} 0.018 {acetyl-CoA}} 40 {triethanolamine}} [C]
Substrates: Acetyl-CoA; maltose [C]
Specific reaction: Acetyl-CoA + maltose = CoA + acetylmaltose [C]
General reaction: Acyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]