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The map label for this gene is spsC [H]

Identifier: 39998112

GI number: 39998112

Start: 3315770

End: 3316954

Strand: Direct

Name: spsC [H]

Synonym: GSU3021

Alternate gene names: 39998112

Gene position: 3315770-3316954 (Clockwise)

Preceding gene: 39998111

Following gene: 39998113

Centisome position: 86.93

GC content: 54.77

Gene sequence:

>1185_bases
ATGAACCCTAATGCAAGTTTCGACAATATGACTGAATCCAGCGCCCCCCCTTCATTCAAGGAAAAACTCCACGTTGGGCG
CCCCAATGTCGGCAATCGGGAAGCACTTCTTGCCCGCATCAACGACATGCTCGACCGCCGTTGGCTCACCAATAACGGTC
CTTTTGTCCAAGAGCTCGAGCAAAAAATGAGTGAGTTTCTCGGCGTTCGAAACTGCATCGCCATGTGCAATGCAACCATC
GCCCTCGAGATCACCACCCGGGCACTCGGCATGAGCGGCGAGGTGATAGTGCCTCCGTTCACTTTCGTGGCGACCGCTCA
CGCTTTGCAATGGCAGGAGATAACCCCCGTATTCTGCGACATCGACCCGACGACCCACCATATCGATCCCAAGAAGATCG
AATCAATGATCACGCCCCGCACAACCGGCATCGTCGGAGTTCATCTCTGGGGACGCCCTTGTGCAGTCAACACCCTTACG
GAGATAGCAGCAAAACATAAGTTAAAACTTATCTTCGACGCGGCTCACGCTTTCGGCTGCTCGCACGGCGGCCGAATGAT
AGGCGGCTTCGGCGACGCAGAGGTGTTCAGCTTCCATGCCACCAAGTTCTTCAATACCTTCGAGGGGGGACTCGTCGCAA
CCGACAATGACGAGTTGGCCCAGAAGATCAGGCTCATGAAGAACTTCGGCTTCGAGGGTTACGACAACGTCATCTATATT
GGCACCAACGGCAAAATGACGGAGATCTGCGCGGCCATGGGGCTCACGAACCTTGAAAGCCTCGACGAGTTCATCCAGAC
CAACCACACCAACTATTACCGTTATCGTCAGGGGCTCTCCGGGCTGCCGGGCGTGTCGGTGATTGAGTACAACGAGGCCG
AACGGAACAATTATCAATACGTGGTACTGGAGATCGACGAGAAGATGGCGGGAGTATCCAGAGATCGTTTGGTAGAGGCA
CTCCATGCGAAAAACGTCATCGCCCGGAGGTATTTCTACCCAGGCTGCCACCGGATGGAACCGTATCGCTCGTACTTTCC
ACACTCACGGCTGCTCCTGCCGAAGACAGAAAGATTGGCGAGACGGGTCATGCTGCTGCCGACGGGCACGGCAGTCGAAC
TGGAGCATATTGATGCAATCTGCGTTCTCATAAAACGAATCATCAACGGCTCCATACTCTCCTAG

Upstream 100 bases:

>100_bases
AATAGGAAGCAACGTAGTTATAGCCAACGGCGCCAACGTGTTTCACGATGTGCCGGACAACACCGTCGTCAAGATTTGAC
GTAATGGTTGCCAAATGAAT

Downstream 100 bases:

>100_bases
ACATGAAACAGGAATAGCCACGTTATGATCTGTCACATTGCTTTCGAAAGCGACTACTCTTTCGCGCTACACAACCTGCT
CTTGAAACACTTCGATATCA

Product: DegT/DnrJ/EryC1/StrS family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MNPNASFDNMTESSAPPSFKEKLHVGRPNVGNREALLARINDMLDRRWLTNNGPFVQELEQKMSEFLGVRNCIAMCNATI
ALEITTRALGMSGEVIVPPFTFVATAHALQWQEITPVFCDIDPTTHHIDPKKIESMITPRTTGIVGVHLWGRPCAVNTLT
EIAAKHKLKLIFDAAHAFGCSHGGRMIGGFGDAEVFSFHATKFFNTFEGGLVATDNDELAQKIRLMKNFGFEGYDNVIYI
GTNGKMTEICAAMGLTNLESLDEFIQTNHTNYYRYRQGLSGLPGVSVIEYNEAERNNYQYVVLEIDEKMAGVSRDRLVEA
LHAKNVIARRYFYPGCHRMEPYRSYFPHSRLLLPKTERLARRVMLLPTGTAVELEHIDAICVLIKRIINGSILS

Sequences:

>Translated_394_residues
MNPNASFDNMTESSAPPSFKEKLHVGRPNVGNREALLARINDMLDRRWLTNNGPFVQELEQKMSEFLGVRNCIAMCNATI
ALEITTRALGMSGEVIVPPFTFVATAHALQWQEITPVFCDIDPTTHHIDPKKIESMITPRTTGIVGVHLWGRPCAVNTLT
EIAAKHKLKLIFDAAHAFGCSHGGRMIGGFGDAEVFSFHATKFFNTFEGGLVATDNDELAQKIRLMKNFGFEGYDNVIYI
GTNGKMTEICAAMGLTNLESLDEFIQTNHTNYYRYRQGLSGLPGVSVIEYNEAERNNYQYVVLEIDEKMAGVSRDRLVEA
LHAKNVIARRYFYPGCHRMEPYRSYFPHSRLLLPKTERLARRVMLLPTGTAVELEHIDAICVLIKRIINGSILS
>Mature_394_residues
MNPNASFDNMTESSAPPSFKEKLHVGRPNVGNREALLARINDMLDRRWLTNNGPFVQELEQKMSEFLGVRNCIAMCNATI
ALEITTRALGMSGEVIVPPFTFVATAHALQWQEITPVFCDIDPTTHHIDPKKIESMITPRTTGIVGVHLWGRPCAVNTLT
EIAAKHKLKLIFDAAHAFGCSHGGRMIGGFGDAEVFSFHATKFFNTFEGGLVATDNDELAQKIRLMKNFGFEGYDNVIYI
GTNGKMTEICAAMGLTNLESLDEFIQTNHTNYYRYRQGLSGLPGVSVIEYNEAERNNYQYVVLEIDEKMAGVSRDRLVEA
LHAKNVIARRYFYPGCHRMEPYRSYFPHSRLLLPKTERLARRVMLLPTGTAVELEHIDAICVLIKRIINGSILS

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=382, Percent_Identity=33.5078534031414, Blast_Score=181, Evalue=5e-47,
Organism=Escherichia coli, GI2367285, Length=333, Percent_Identity=28.5285285285285, Blast_Score=115, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 44231; Mature: 44231

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPNASFDNMTESSAPPSFKEKLHVGRPNVGNREALLARINDMLDRRWLTNNGPFVQELE
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH
QKMSEFLGVRNCIAMCNATIALEITTRALGMSGEVIVPPFTFVATAHALQWQEITPVFCD
HHHHHHHHHHHHHHHHCCEEEEEEEEHHHCCCCCEEECCHHHHHHHHHHCCCCCCCEEEE
IDPTTHHIDPKKIESMITPRTTGIVGVHLWGRPCAVNTLTEIAAKHKLKLIFDAAHAFGC
CCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHEEEEHHHHHCC
SHGGRMIGGFGDAEVFSFHATKFFNTFEGGLVATDNDELAQKIRLMKNFGFEGYDNVIYI
CCCCCEECCCCCCHHEEHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCCCEEEE
GTNGKMTEICAAMGLTNLESLDEFIQTNHTNYYRYRQGLSGLPGVSVIEYNEAERNNYQY
CCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCEEE
VVLEIDEKMAGVSRDRLVEALHAKNVIARRYFYPGCHRMEPYRSYFPHSRLLLPKTERLA
EEEEECCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEECCCHHHHH
RRVMLLPTGTAVELEHIDAICVLIKRIINGSILS
CEEEEECCCCEEEHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNPNASFDNMTESSAPPSFKEKLHVGRPNVGNREALLARINDMLDRRWLTNNGPFVQELE
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH
QKMSEFLGVRNCIAMCNATIALEITTRALGMSGEVIVPPFTFVATAHALQWQEITPVFCD
HHHHHHHHHHHHHHHHCCEEEEEEEEHHHCCCCCEEECCHHHHHHHHHHCCCCCCCEEEE
IDPTTHHIDPKKIESMITPRTTGIVGVHLWGRPCAVNTLTEIAAKHKLKLIFDAAHAFGC
CCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHEEEEHHHHHCC
SHGGRMIGGFGDAEVFSFHATKFFNTFEGGLVATDNDELAQKIRLMKNFGFEGYDNVIYI
CCCCCEECCCCCCHHEEHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCCCEEEE
GTNGKMTEICAAMGLTNLESLDEFIQTNHTNYYRYRQGLSGLPGVSVIEYNEAERNNYQY
CCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCEEE
VVLEIDEKMAGVSRDRLVEALHAKNVIARRYFYPGCHRMEPYRSYFPHSRLLLPKTERLA
EEEEECCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEECCCHHHHH
RRVMLLPTGTAVELEHIDAICVLIKRIINGSILS
CEEEEECCCCEEEHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]