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The map label for this gene is 39998089

Identifier: 39998089

GI number: 39998089

Start: 3292111

End: 3292653

Strand: Reverse

Name: 39998089

Synonym: GSU2998

Alternate gene names: NA

Gene position: 3292653-3292111 (Counterclockwise)

Preceding gene: 39998090

Following gene: 39998088

Centisome position: 86.33

GC content: 64.09

Gene sequence:

>543_bases
ATGCGCAAAGCCAACAAGCGAATCACCGATTTCGACATCATCCGCCGGATGCTCGACACCTGTCACGTGGGGCGGCTCGG
CACCCTGGGAGCCGACGGCTGGCCCCGGATCAAGCCCCTCAACTTCGCTTGGCACGAGGGGCGGATCTATTTCCACTGTG
CCCTGGAAGGGGAGAAGCTCGACGATATCCGCCACGAGGACCGGGTCTGCTTTGAGGTGGACCTGCCCATCGCCTATGTG
CGGGGAACGACGGAAACCCCCTGCCGGGCCGAGTACCTCTACCGCAGCGTGATCATGCGGGGCAGGGCGCGATTGGTTGA
GGAGGCGGCCGAGAAGGTGCTTGCCCTCGACTGTCTCATGCGCAAATACCAGCCCGACGGTACCTGGGGTTCCTTCCCGG
AGGAAAAACTGGCCATCACCGGCATCGTGCGGATCGACGTGGAGGAAGTGGTGGGCAAGGAAGAGCTGGGCAAGGACGAA
CTGCGGGAGCAGGCCCTGGCCATGCTTGCGTCGGGTGTTCCCCTCCCGGCGATCCTGGGGTAG

Upstream 100 bases:

>100_bases
TCCCGGAAGTCCCCTTCATCACCAACCGGGGACGCAAGGGGGGGTCCAACGTGGCGGCGGCGGTGGTGAACGCCCTGCTC
ATCATGGCTATGGAGGGGTA

Downstream 100 bases:

>100_bases
GGTGCGGTGTCTGGCCGGGAGCTTCGCCACGGCTACACCACTGGTGCCTGCGCCGCGGCCGCGGCTGCCGGAGCGGCCCG
GATGCTCCGGCGCCAGGAGC

Product: nitroimidazole resistance protein

Products: NA

Alternate protein names: Nitroimidazole Resistance Protein; Pyridoxamine 5\-Phosphate-Related Protein; Pyridoxamine 5-Phosphate Oxidase; Antibiotic Resistance Protein

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRKANKRITDFDIIRRMLDTCHVGRLGTLGADGWPRIKPLNFAWHEGRIYFHCALEGEKLDDIRHEDRVCFEVDLPIAYV
RGTTETPCRAEYLYRSVIMRGRARLVEEAAEKVLALDCLMRKYQPDGTWGSFPEEKLAITGIVRIDVEEVVGKEELGKDE
LREQALAMLASGVPLPAILG

Sequences:

>Translated_180_residues
MRKANKRITDFDIIRRMLDTCHVGRLGTLGADGWPRIKPLNFAWHEGRIYFHCALEGEKLDDIRHEDRVCFEVDLPIAYV
RGTTETPCRAEYLYRSVIMRGRARLVEEAAEKVLALDCLMRKYQPDGTWGSFPEEKLAITGIVRIDVEEVVGKEELGKDE
LREQALAMLASGVPLPAILG
>Mature_180_residues
MRKANKRITDFDIIRRMLDTCHVGRLGTLGADGWPRIKPLNFAWHEGRIYFHCALEGEKLDDIRHEDRVCFEVDLPIAYV
RGTTETPCRAEYLYRSVIMRGRARLVEEAAEKVLALDCLMRKYQPDGTWGSFPEEKLAITGIVRIDVEEVVGKEELGKDE
LREQALAMLASGVPLPAILG

Specific function: Unknown

COG id: COG3467

COG function: function code R; Predicted flavin-nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20470; Mature: 20470

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKANKRITDFDIIRRMLDTCHVGRLGTLGADGWPRIKPLNFAWHEGRIYFHCALEGEKL
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCHH
DDIRHEDRVCFEVDLPIAYVRGTTETPCRAEYLYRSVIMRGRARLVEEAAEKVLALDCLM
HHHHCCCCEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKYQPDGTWGSFPEEKLAITGIVRIDVEEVVGKEELGKDELREQALAMLASGVPLPAILG
HHCCCCCCCCCCCCCCEEEEEEEEECHHHHHCHHHCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRKANKRITDFDIIRRMLDTCHVGRLGTLGADGWPRIKPLNFAWHEGRIYFHCALEGEKL
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCHH
DDIRHEDRVCFEVDLPIAYVRGTTETPCRAEYLYRSVIMRGRARLVEEAAEKVLALDCLM
HHHHCCCCEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKYQPDGTWGSFPEEKLAITGIVRIDVEEVVGKEELGKDELREQALAMLASGVPLPAILG
HHCCCCCCCCCCCCCCEEEEEEEEECHHHHHCHHHCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA