| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is cbiG [H]
Identifier: 39998084
GI number: 39998084
Start: 3287136
End: 3288191
Strand: Reverse
Name: cbiG [H]
Synonym: GSU2993
Alternate gene names: 39998084
Gene position: 3288191-3287136 (Counterclockwise)
Preceding gene: 39998085
Following gene: 308513333
Centisome position: 86.21
GC content: 66.76
Gene sequence:
>1056_bases ATGCGCATCGCCATCATCGCCATAACCCGCAACGGGGCCCGGCTCGGCTCCCAGCTGCGGGAGGGACTGGGCACCGCTGA CCTCCACGTCCTCCAGAAGTTCGCGGGCCAGGCCGGGAAGGTGGCCGTGCCGTTTGCGGGGGATCTGAAGGGGCTTGTGG CGCGCCTCTGGCCGGACGTGAAGGGCTTTGTCTTCATCATGGCGGCCGGCATCGTGGTGCGGATGATCGCGCCATTGCTG GAGTCAAAGGACAAGGACCCGGCAGTGGTGGTCATGGACGAAGGGGGGCGGTTCGCCGTGTCGCTCCTCTCCGGCCACCT GGGCGGGGCCAATGAACTGGCTTGCCGTTGCGCCCACGTCACCGGGGCCCGTGAGGTGATCACTACCGCCACCGATGCCA ACGATCTTCCCTCCTTCGATCTGCTCGCCAAGGAGGCCGGCTGGGCCATCGAGGACCTTTCCCGCATCAAGACGCTGAAC GCCCTGCTGCTGGAGGGGGAAGAAATTGCCGTGGTGGACCCGACGGACCGGGTCAGGGCCTATTTCAACGGCAAGGCACG GCTCACGTTTCACGATACCTTTGTGCAGGCCCTCCAGAGCGGCGCCAAGGGGTTCGTCTTCGCCACCAATCGCCGGCTGC CGCCCCAATCGCAGTCCGACGCCCTGTTGATCCTGCGCCCGCGGAACCTGGCCCTGGGGATCGGCTGTAACAGCGGGACC CCGGCCGAGGAGATCGAAGAGGTCGTCACGGTCCAGCTCAAGCGCCTCTTCCTCGCCCTCAAGAGCGTGGCGGTCATCGG CTCGGCCATGGCCAAGCGCGGCGAGGAGGGGTTGCTCCGGTTTGCCGAGCGCCACTGCATTGAGCTCCGGTTCTACGAGA GCGAGGAGTTGAACGGCGTTGCCGTGCCGTCGCCGCCGTCGGCCCACGCCCTGGAGGCCATCGGCGCCGTTGGTGTGGCC GAGCCGTCGGCGGTGCTCGCGTCCAACGGGGGGAGCCTTCTGCTCAAGAAGGTCAAGAGCGGCAACGTGACCCTGGCCAT AGCTGAAATCGTCTGA
Upstream 100 bases:
>100_bases GCTGAAGGCCCGGTCGCTCCTGTACGACGGCGGATTCTCGCACGAGTTCCGCACGGGGATTATCACGTAGCATTTCCCGC GGCAAAGGAGGTTAGGCGTC
Downstream 100 bases:
>100_bases TACGAGGTTTGTGATGTCCATACTCTACGTCGTCGGGATCGGTCCCGGCGACCTCGACCATATGACGTTCCACGCCACCG AAGCCATCGAGCGGGCCCAG
Product: cobalamin biosynthesis protein CbiG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MRIAIIAITRNGARLGSQLREGLGTADLHVLQKFAGQAGKVAVPFAGDLKGLVARLWPDVKGFVFIMAAGIVVRMIAPLL ESKDKDPAVVVMDEGGRFAVSLLSGHLGGANELACRCAHVTGAREVITTATDANDLPSFDLLAKEAGWAIEDLSRIKTLN ALLLEGEEIAVVDPTDRVRAYFNGKARLTFHDTFVQALQSGAKGFVFATNRRLPPQSQSDALLILRPRNLALGIGCNSGT PAEEIEEVVTVQLKRLFLALKSVAVIGSAMAKRGEEGLLRFAERHCIELRFYESEELNGVAVPSPPSAHALEAIGAVGVA EPSAVLASNGGSLLLKKVKSGNVTLAIAEIV
Sequences:
>Translated_351_residues MRIAIIAITRNGARLGSQLREGLGTADLHVLQKFAGQAGKVAVPFAGDLKGLVARLWPDVKGFVFIMAAGIVVRMIAPLL ESKDKDPAVVVMDEGGRFAVSLLSGHLGGANELACRCAHVTGAREVITTATDANDLPSFDLLAKEAGWAIEDLSRIKTLN ALLLEGEEIAVVDPTDRVRAYFNGKARLTFHDTFVQALQSGAKGFVFATNRRLPPQSQSDALLILRPRNLALGIGCNSGT PAEEIEEVVTVQLKRLFLALKSVAVIGSAMAKRGEEGLLRFAERHCIELRFYESEELNGVAVPSPPSAHALEAIGAVGVA EPSAVLASNGGSLLLKKVKSGNVTLAIAEIV >Mature_351_residues MRIAIIAITRNGARLGSQLREGLGTADLHVLQKFAGQAGKVAVPFAGDLKGLVARLWPDVKGFVFIMAAGIVVRMIAPLL ESKDKDPAVVVMDEGGRFAVSLLSGHLGGANELACRCAHVTGAREVITTATDANDLPSFDLLAKEAGWAIEDLSRIKTLN ALLLEGEEIAVVDPTDRVRAYFNGKARLTFHDTFVQALQSGAKGFVFATNRRLPPQSQSDALLILRPRNLALGIGCNSGT PAEEIEEVVTVQLKRLFLALKSVAVIGSAMAKRGEEGLLRFAERHCIELRFYESEELNGVAVPSPPSAHALEAIGAVGVA EPSAVLASNGGSLLLKKVKSGNVTLAIAEIV
Specific function: Unknown
COG id: COG2073
COG function: function code H; Cobalamin biosynthesis protein CbiG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021745 - InterPro: IPR021744 - InterPro: IPR002750 [H]
Pfam domain/function: PF01890 CbiG; PF11761 CbiG_mid; PF11760 CbiG_N [H]
EC number: NA
Molecular weight: Translated: 37172; Mature: 37172
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAIIAITRNGARLGSQLREGLGTADLHVLQKFAGQAGKVAVPFAGDLKGLVARLWPDV CEEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHCCCH KGFVFIMAAGIVVRMIAPLLESKDKDPAVVVMDEGGRFAVSLLSGHLGGANELACRCAHV HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEHHCCCCCCHHHHHEEHHC TGAREVITTATDANDLPSFDLLAKEAGWAIEDLSRIKTLNALLLEGEEIAVVDPTDRVRA CCCHHHEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHEECCCEEEEECCHHHHHE YFNGKARLTFHDTFVQALQSGAKGFVFATNRRLPPQSQSDALLILRPRNLALGIGCNSGT EECCCEEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCEEEEECCCCCC PAEEIEEVVTVQLKRLFLALKSVAVIGSAMAKRGEEGLLRFAERHCIELRFYESEELNGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEEECCCCCCEE AVPSPPSAHALEAIGAVGVAEPSAVLASNGGSLLLKKVKSGNVTLAIAEIV ECCCCCCHHHHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEEECC >Mature Secondary Structure MRIAIIAITRNGARLGSQLREGLGTADLHVLQKFAGQAGKVAVPFAGDLKGLVARLWPDV CEEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHCCCH KGFVFIMAAGIVVRMIAPLLESKDKDPAVVVMDEGGRFAVSLLSGHLGGANELACRCAHV HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEHHCCCCCCHHHHHEEHHC TGAREVITTATDANDLPSFDLLAKEAGWAIEDLSRIKTLNALLLEGEEIAVVDPTDRVRA CCCHHHEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHEECCCEEEEECCHHHHHE YFNGKARLTFHDTFVQALQSGAKGFVFATNRRLPPQSQSDALLILRPRNLALGIGCNSGT EECCCEEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCEEEEECCCCCC PAEEIEEVVTVQLKRLFLALKSVAVIGSAMAKRGEEGLLRFAERHCIELRFYESEELNGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEEECCCCCCEE AVPSPPSAHALEAIGAVGVAEPSAVLASNGGSLLLKKVKSGNVTLAIAEIV ECCCCCCHHHHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501034; 11677609 [H]