| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997470
Identifier: 39997470
GI number: 39997470
Start: 2601774
End: 2602388
Strand: Reverse
Name: 39997470
Synonym: GSU2374
Alternate gene names: NA
Gene position: 2602388-2601774 (Counterclockwise)
Preceding gene: 308513320
Following gene: 39997469
Centisome position: 68.23
GC content: 64.55
Gene sequence:
>615_bases ATGCTTTTCAGCGTCTCCTGCAACCAGAGCGGACTTCGCAAGGAAGCCGGTCCGACGGCACAGTTCGACGCCGCGACCGA TCTGGAGGTCCGCAGGCTCATGCAGCAGGGCGTCGAGTACGATGAACGACAGCGCCAGGCCCGAGCCATCGCCGTCGTCT TCGCCAAGAGGACGACCCCTGAGCGCGCCCACAAGCTCGCAGCCCTCTGCTACCTGAAAACCCTCGGCACCGACCTCATG CCGCTCGACCTGGCGGAAATAGCCCTCTCGGAAACCGGTTCCCTCGGATTCAATGCCAAGGCAGTCTCGCCCAAAGGGGC GCTCGGCGTGTGGCAGTTGATGCCGTACCGCGCCGCCAGCCACGGTTACCGGCCCGAGGAGATGCAGGACGACGAGAAGT GCGCCGAAGCCGCCGTGCGGGAGCTCTACAGCAAGCTCGACATGGCAAACGGCGACCTTGTCCGTGCCAAGAAACTTTAC TGTGGCGTCGGCCCCGAAGCCGATGCCTACGAGATCAAGCGGCGCCGCTACCGGAGAGAGATCCTCCGTGAACTGGAGCC GTCGCTTCCGGTGCGGGCCCAGGAGCTCCGCATCGAAGTGGAGCAGGCTTCGTAA
Upstream 100 bases:
>100_bases TCCCATTGATCACCGTCCGTACTTCGGACCGTCCGGCAAAGCTGCGTACCCCGACCAAAAAACCACTATGAAAAAGATGA TACTAGTATTGGCAGGAACG
Downstream 100 bases:
>100_bases CCAGGAATCATTCTCCCGTGAAACAGGTATTATTCGCCGCATTCATACTGCTCTTTCTTTCGGGCTGCTCTCTGTTCCTC TCCGAACCACGGGTCGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MLFSVSCNQSGLRKEAGPTAQFDAATDLEVRRLMQQGVEYDERQRQARAIAVVFAKRTTPERAHKLAALCYLKTLGTDLM PLDLAEIALSETGSLGFNAKAVSPKGALGVWQLMPYRAASHGYRPEEMQDDEKCAEAAVRELYSKLDMANGDLVRAKKLY CGVGPEADAYEIKRRRYRREILRELEPSLPVRAQELRIEVEQAS
Sequences:
>Translated_204_residues MLFSVSCNQSGLRKEAGPTAQFDAATDLEVRRLMQQGVEYDERQRQARAIAVVFAKRTTPERAHKLAALCYLKTLGTDLM PLDLAEIALSETGSLGFNAKAVSPKGALGVWQLMPYRAASHGYRPEEMQDDEKCAEAAVRELYSKLDMANGDLVRAKKLY CGVGPEADAYEIKRRRYRREILRELEPSLPVRAQELRIEVEQAS >Mature_204_residues MLFSVSCNQSGLRKEAGPTAQFDAATDLEVRRLMQQGVEYDERQRQARAIAVVFAKRTTPERAHKLAALCYLKTLGTDLM PLDLAEIALSETGSLGFNAKAVSPKGALGVWQLMPYRAASHGYRPEEMQDDEKCAEAAVRELYSKLDMANGDLVRAKKLY CGVGPEADAYEIKRRRYRREILRELEPSLPVRAQELRIEVEQAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22877; Mature: 22877
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFSVSCNQSGLRKEAGPTAQFDAATDLEVRRLMQQGVEYDERQRQARAIAVVFAKRTTP CEEECCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCH ERAHKLAALCYLKTLGTDLMPLDLAEIALSETGSLGFNAKAVSPKGALGVWQLMPYRAAS HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHC HGYRPEEMQDDEKCAEAAVRELYSKLDMANGDLVRAKKLYCGVGPEADAYEIKRRRYRRE CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH ILRELEPSLPVRAQELRIEVEQAS HHHHCCCCCCCCHHHHEEEEECCC >Mature Secondary Structure MLFSVSCNQSGLRKEAGPTAQFDAATDLEVRRLMQQGVEYDERQRQARAIAVVFAKRTTP CEEECCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCH ERAHKLAALCYLKTLGTDLMPLDLAEIALSETGSLGFNAKAVSPKGALGVWQLMPYRAAS HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHC HGYRPEEMQDDEKCAEAAVRELYSKLDMANGDLVRAKKLYCGVGPEADAYEIKRRRYRRE CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH ILRELEPSLPVRAQELRIEVEQAS HHHHCCCCCCCCHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA