| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is iorB [H]
Identifier: 39997150
GI number: 39997150
Start: 2253583
End: 2254131
Strand: Reverse
Name: iorB [H]
Synonym: GSU2052
Alternate gene names: 39997150
Gene position: 2254131-2253583 (Counterclockwise)
Preceding gene: 308513312
Following gene: 39997149
Centisome position: 59.1
GC content: 67.4
Gene sequence:
>549_bases ATGACCGGGGGAGAGCAACTGATCATCAGCGGGGTGGGGGGGCAGGGAATCCTGTTCGTCACCCGCATTCTGGCCGAGAC CGCCATCCGCAACGGCATGCCGGTCATGACCTCCGAAACCCACGGCATGGCCCAGCGGGGCGGGGTGGTCATCTCCCACC TGAAGGCGGGCGAATTCTCAAGTCCCCTCGTGCGCCCCGGCAGGGCCGACGGCCTGCTGGCCATGAAGGAGGAGAACATT GCGCTCCACCGGCACTTCCTCCGCCCCGGCGGGTGGATCGTGGCCAATGCCTCCCGTGTCCCGGCCGGACTTGAGGGGCA CCTGGTCCATGTAATCGACGCTGACGCCCTTGCCCTGGAGATCGGCTCCCCCCAGGCGGTGAACCTGATCCTCCTCGGCT TTGCCCTAGCCCGGCTGACCGATGCCGGCCTCTTCTGCTCCACTCACCAGGTGATTGCAACCATCGAGCGGCGGCTGGGT GAAAAGGGGGCGCTCCGGGCCGCATCTCTCAAGGCCCTGCGTCTCGGCATGGAGCGGGCGGAGGCTTGA
Upstream 100 bases:
>100_bases ACGAAGAAACGAAGCGGGTGGTTGTCGATACCCTCGTCTGTTCCAAGTGCGGCGTCTGCGTCGATGTCTGTCCGCGGCTG GCCATCGAGGAGGTGGGAAA
Downstream 100 bases:
>100_bases TTTTCCGGTAATCCTTTCCGATGGAGGTTGCATCCCCCTATGCTGACCCGCTTTCCCGCCCACTACTCATCTCCCGCGGA GCTTGAACGGCTCCAGCTCG
Product: indolepyruvate oxidoreductase subunit B
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit beta [H]
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MTGGEQLIISGVGGQGILFVTRILAETAIRNGMPVMTSETHGMAQRGGVVISHLKAGEFSSPLVRPGRADGLLAMKEENI ALHRHFLRPGGWIVANASRVPAGLEGHLVHVIDADALALEIGSPQAVNLILLGFALARLTDAGLFCSTHQVIATIERRLG EKGALRAASLKALRLGMERAEA
Sequences:
>Translated_182_residues MTGGEQLIISGVGGQGILFVTRILAETAIRNGMPVMTSETHGMAQRGGVVISHLKAGEFSSPLVRPGRADGLLAMKEENI ALHRHFLRPGGWIVANASRVPAGLEGHLVHVIDADALALEIGSPQAVNLILLGFALARLTDAGLFCSTHQVIATIERRLG EKGALRAASLKALRLGMERAEA >Mature_181_residues TGGEQLIISGVGGQGILFVTRILAETAIRNGMPVMTSETHGMAQRGGVVISHLKAGEFSSPLVRPGRADGLLAMKEENIA LHRHFLRPGGWIVANASRVPAGLEGHLVHVIDADALALEIGSPQAVNLILLGFALARLTDAGLFCSTHQVIATIERRLGE KGALRAASLKALRLGMERAEA
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG1014
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017719 - InterPro: IPR019752 - InterPro: IPR002869 [H]
Pfam domain/function: PF01558 POR [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 19167; Mature: 19036
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGGEQLIISGVGGQGILFVTRILAETAIRNGMPVMTSETHGMAQRGGVVISHLKAGEFS CCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHCCEEEEEECCCCCC SPLVRPGRADGLLAMKEENIALHRHFLRPGGWIVANASRVPAGLEGHLVHVIDADALALE CCCCCCCCCCCEEEEECCCHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEE IGSPQAVNLILLGFALARLTDAGLFCSTHQVIATIERRLGEKGALRAASLKALRLGMERA CCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH EA CC >Mature Secondary Structure TGGEQLIISGVGGQGILFVTRILAETAIRNGMPVMTSETHGMAQRGGVVISHLKAGEFS CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHCCEEEEEECCCCCC SPLVRPGRADGLLAMKEENIALHRHFLRPGGWIVANASRVPAGLEGHLVHVIDADALALE CCCCCCCCCCCEEEEECCCHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEE IGSPQAVNLILLGFALARLTDAGLFCSTHQVIATIERRLGEKGALRAASLKALRLGMERA CCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH EA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]