| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is iorA [H]
Identifier: 308513312
GI number: 308513312
Start: 2254128
End: 2255945
Strand: Reverse
Name: iorA [H]
Synonym: NA
Alternate gene names: 308513312
Gene position: 2255945-2254128 (Counterclockwise)
Preceding gene: 39997156
Following gene: 39997150
Centisome position: 59.15
GC content: 66.83
Gene sequence:
>1818_bases GTGAGTGAACGGAAGCTGTTGCTCGGCAATGATGCCATGGCCCACGGCCTTGTGGAGAGCGGATGCAGTGTCGTCGCCTC GTATCCCGGCACGCCCGCCTCGGAGATCCTCTCCGGCGTGGCTCTCTGGCGGGAGCGTTACGGCGTACCCATGCATGTGG AGTGGGCCGTTAATGAGAAAGTTGCCTTCGAGATTGCCTACGCCGCCGCCCAGTCCGGTTTGCGGGCGGCCACGGCCATG AAGCAAGTGGGGCTCAATGTTGCCTCCGATCCGTTCATGAGTGCCGCCTACCTGGGAGTCACCGGCGGTTTCGTGGTCAT CTCCGCCGACGACCCGGGGCCCCACTCGTCCCAGACCGAGCAGGACAGCCGCCTGACGGCCATGTCCGCCAAGGTGCCCG TTCTCGACCCCGATTCCCCCAACCAGGCCCGGGAGCTCATTGCCGCCGGCTTCGAACTGTCCGAGGCCTTCCGGGTGCCG GTCATGCTCCGGCCCACTACCCGCGTCTGCCACGCCAACCAGGACATCCTCCCCGGCCCGGTTGCTCCGTCCGAACGGAC GGCCGCGTTTGTCAAGGATCCGACCCGTTGGGCCGCTACCCCGGTTTTTCGTCACAAGCTTCACTTGGAGTTGGAGGAGA AGCTGGCCGGCATTGCCGCCTGGGAGCCGACCGCCCCGCGGCTGCTCAATCCGGGGGTCTCTTCCGGTAAGGCATTGGTT GCCTCCGGCGTGGCAGCGGCCCACGCCCGCGAGGTGCTCGAGGACTTGGGACTCCGGGACGTTATTCCTCTCTGGCAGGT GGTACAGCCCTACCCCCTCCACACGGCGTTCGTGGAGCGGCTTCTGGCCGATTACGACGAGATCCTGGTACTGGAGGAGA CCACCGGGGTCATGGAACTGCAACTGGCCGACCGTCACCGGGTGAAGGGAAAACGGTCGGGCTTCGTTCCCGAGGTGGGG GAGCTGTCCCCGGAACTGGTGGAGCGTCTGGTGGCCGCTTTTGCCGGCATTCCCGCCGCACCCTCCGTTGCGCCCCCCAC GGGCGGCGGCCGCCGGCCGACCCTCTGTCCGGGCTGCCCCCACCGGGCCAGCTTCCATGCCATCAAACGGGCTGCTCCCA AGGGAATCTATCCTTCCGACATCGGCTGCTACACCCTCGGCCTCAACCTGGGAGGGGTCGACACGGTCCTCTGCATGGGG GCGGCGGTCTCCCAGGCGGCCGGCTTCTACCACGCCTACAAACTTTCCGGCCAGGTGCCCGACATCGTCGCCACCATCGG CGACTCCACCTTCTTCCACGCGGGAATCCCGCCGCTCATCGACGCAGTGGTGCAGGATGCGCGGTTCGTGCTCGTGATTC TGGACAATGCCACTACCGCCATGACCGGCAACCAGCCGACCCCGGCACTGGGGTGGGGCGCCGGAGGGGTCCCCACGGCG ACGGTGGATATGGAGGGGCTGGTCAAGGCATGCGGCGTGCGCTTCTGCCGGTCGGGCGAGCCGGGCAACCTTCCCGCTTT TACCGCCCTGATGAAAGAAGCGGTGGCCTTTGCCCGGACCGACGGGCTTGCCGTGGTCATTGCCCGCCAGCCCTGCGTGG TTGACCGGACCTACACCGGCGAACGGCCGCCGAAGCGGGCGGTGCGGGTAAGCGATGCCTGCAACGGCTGCCGCTTCTGC ACCACCCAGTTCGAGTGCCCGGCCCTGGTCTACGACGAAGAAACGAAGCGGGTGGTTGTCGATACCCTCGTCTGTTCCAA GTGCGGCGTCTGCGTCGATGTCTGTCCGCGGCTGGCCATCGAGGAGGTGGGAAAATGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: indolepyruvate ferredoxin oxidoreductase subunit alpha
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 605; Mature: 604
Protein sequence:
NA
Sequences:
>Translated_605_residues MSERKLLLGNDAMAHGLVESGCSVVASYPGTPASEILSGVALWRERYGVPMHVEWAVNEKVAFEIAYAAAQSGLRAATAM KQVGLNVASDPFMSAAYLGVTGGFVVISADDPGPHSSQTEQDSRLTAMSAKVPVLDPDSPNQARELIAAGFELSEAFRVP VMLRPTTRVCHANQDILPGPVAPSERTAAFVKDPTRWAATPVFRHKLHLELEEKLAGIAAWEPTAPRLLNPGVSSGKALV ASGVAAAHAREVLEDLGLRDVIPLWQVVQPYPLHTAFVERLLADYDEILVLEETTGVMELQLADRHRVKGKRSGFVPEVG ELSPELVERLVAAFAGIPAAPSVAPPTGGGRRPTLCPGCPHRASFHAIKRAAPKGIYPSDIGCYTLGLNLGGVDTVLCMG AAVSQAAGFYHAYKLSGQVPDIVATIGDSTFFHAGIPPLIDAVVQDARFVLVILDNATTAMTGNQPTPALGWGAGGVPTA TVDMEGLVKACGVRFCRSGEPGNLPAFTALMKEAVAFARTDGLAVVIARQPCVVDRTYTGERPPKRAVRVSDACNGCRFC TTQFECPALVYDEETKRVVVDTLVCSKCGVCVDVCPRLAIEEVGK >Mature_604_residues SERKLLLGNDAMAHGLVESGCSVVASYPGTPASEILSGVALWRERYGVPMHVEWAVNEKVAFEIAYAAAQSGLRAATAMK QVGLNVASDPFMSAAYLGVTGGFVVISADDPGPHSSQTEQDSRLTAMSAKVPVLDPDSPNQARELIAAGFELSEAFRVPV MLRPTTRVCHANQDILPGPVAPSERTAAFVKDPTRWAATPVFRHKLHLELEEKLAGIAAWEPTAPRLLNPGVSSGKALVA SGVAAAHAREVLEDLGLRDVIPLWQVVQPYPLHTAFVERLLADYDEILVLEETTGVMELQLADRHRVKGKRSGFVPEVGE LSPELVERLVAAFAGIPAAPSVAPPTGGGRRPTLCPGCPHRASFHAIKRAAPKGIYPSDIGCYTLGLNLGGVDTVLCMGA AVSQAAGFYHAYKLSGQVPDIVATIGDSTFFHAGIPPLIDAVVQDARFVLVILDNATTAMTGNQPTPALGWGAGGVPTAT VDMEGLVKACGVRFCRSGEPGNLPAFTALMKEAVAFARTDGLAVVIARQPCVVDRTYTGERPPKRAVRVSDACNGCRFCT TQFECPALVYDEETKRVVVDTLVCSKCGVCVDVCPRLAIEEVGK
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR017721 - InterPro: IPR002880 - InterPro: IPR011766 [H]
Pfam domain/function: PF01855 POR_N; PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 64130; Mature: 63999
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERKLLLGNDAMAHGLVESGCSVVASYPGTPASEILSGVALWRERYGVPMHVEWAVNEK CCCCCEEECCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCE VAFEIAYAAAQSGLRAATAMKQVGLNVASDPFMSAAYLGVTGGFVVISADDPGPHSSQTE EEEEHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHEEECCCEEEEECCCCCCCCCCCC QDSRLTAMSAKVPVLDPDSPNQARELIAAGFELSEAFRVPVMLRPTTRVCHANQDILPGP HHHHEEEEECCCCEECCCCCHHHHHHHHHCCCHHHHHCCCEEECCCHHHHCCCCCCCCCC VAPSERTAAFVKDPTRWAATPVFRHKLHLELEEKLAGIAAWEPTAPRLLNPGVSSGKALV CCCCCCCEEECCCCHHHHCCHHHHHHHEEEHHHHHCCEECCCCCCCCCCCCCCCCCCHHH ASGVAAAHAREVLEDLGLRDVIPLWQVVQPYPLHTAFVERLLADYDEILVLEETTGVMEL HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEE QLADRHRVKGKRSGFVPEVGELSPELVERLVAAFAGIPAAPSVAPPTGGGRRPTLCPGCP EECHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC HRASFHAIKRAAPKGIYPSDIGCYTLGLNLGGVDTVLCMGAAVSQAAGFYHAYKLSGQVP CCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCC DIVATIGDSTFFHAGIPPLIDAVVQDARFVLVILDNATTAMTGNQPTPALGWGAGGVPTA HHHHCCCCCCEEECCCHHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCCCCCCCCEE TVDMEGLVKACGVRFCRSGEPGNLPAFTALMKEAVAFARTDGLAVVIARQPCVVDRTYTG EECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCC ERPPKRAVRVSDACNGCRFCTTQFECPALVYDEETKRVVVDTLVCSKCGVCVDVCPRLAI CCCHHHHEEHHHCCCCCEEECCCCCCCEEEECCCCCEEHHHHHHHHHCCCHHHHHHHHHH EEVGK HHHCC >Mature Secondary Structure SERKLLLGNDAMAHGLVESGCSVVASYPGTPASEILSGVALWRERYGVPMHVEWAVNEK CCCCEEECCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCE VAFEIAYAAAQSGLRAATAMKQVGLNVASDPFMSAAYLGVTGGFVVISADDPGPHSSQTE EEEEHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHEEECCCEEEEECCCCCCCCCCCC QDSRLTAMSAKVPVLDPDSPNQARELIAAGFELSEAFRVPVMLRPTTRVCHANQDILPGP HHHHEEEEECCCCEECCCCCHHHHHHHHHCCCHHHHHCCCEEECCCHHHHCCCCCCCCCC VAPSERTAAFVKDPTRWAATPVFRHKLHLELEEKLAGIAAWEPTAPRLLNPGVSSGKALV CCCCCCCEEECCCCHHHHCCHHHHHHHEEEHHHHHCCEECCCCCCCCCCCCCCCCCCHHH ASGVAAAHAREVLEDLGLRDVIPLWQVVQPYPLHTAFVERLLADYDEILVLEETTGVMEL HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEE QLADRHRVKGKRSGFVPEVGELSPELVERLVAAFAGIPAAPSVAPPTGGGRRPTLCPGCP EECHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC HRASFHAIKRAAPKGIYPSDIGCYTLGLNLGGVDTVLCMGAAVSQAAGFYHAYKLSGQVP CCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCC DIVATIGDSTFFHAGIPPLIDAVVQDARFVLVILDNATTAMTGNQPTPALGWGAGGVPTA HHHHCCCCCCEEECCCHHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCCCCCCCCEE TVDMEGLVKACGVRFCRSGEPGNLPAFTALMKEAVAFARTDGLAVVIARQPCVVDRTYTG EECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCC ERPPKRAVRVSDACNGCRFCTTQFECPALVYDEETKRVVVDTLVCSKCGVCVDVCPRLAI CCCHHHHEEHHHCCCCCEEECCCCCCCEEEECCCCCEEHHHHHHHHHCCCHHHHHHHHHH EEVGK HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9108258 [H]