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The map label for this gene is ctpA-1 [H]

Identifier: 39996072

GI number: 39996072

Start: 1043393

End: 1044745

Strand: Direct

Name: ctpA-1 [H]

Synonym: GSU0969

Alternate gene names: 39996072

Gene position: 1043393-1044745 (Clockwise)

Preceding gene: 39996071

Following gene: 39996073

Centisome position: 27.36

GC content: 62.75

Gene sequence:

>1353_bases
ATGCAAACGAGAACGAGGATAACCCTCGGCCTGGTGGTTGCCATACTCTGCCTCACCATCGGCGTGGCCGCCGGATGGCG
CTACTATAACCCTGCTGCCGACCAGGTCGGTGCCGAGCACCTGAGACTGTTCCGCGAGGTCGTCTCGATCGTGCGGAGCA
GTTACGTGGAAGAGGTGAGCGGGAAAAAGCTGCTGGAAGGGGCCATCAACGGCATGCTCGCCTCGCTGGACCCCCACAGC
TCGTATCTTCCGCCGGAACCCTTCACCGAAATGAAGACGGAGATATCGGGGTCCTTCGGCGGCCTCGGCATCGAGATCTC
CATGCGTGACGGCAAACTGACCGTAGTTGCCCCCATCGAGGATACTCCCGCCTGGCGGGCCGGAATCCAGTCGGGCGACC
ACATCTGGAAGATCGACGATACTCCCACCCGCGGTCTCACCATCACCCAGGCGGTCAAGCAGATGAGGGGCGAGAAGGGG
ACCCAGGTCTCCCTCTCGATTCTGCGGAACGGGAACGGAAAACCTCTCGTGTTCCCCCTGGTGCGGGACATCATCAAGAC
CAGGAGCCTCAAATCCCGGACTCTGGAGCCGGGTTACGGCTATGTCAGGATAAGCCAGTTCCAAGAGCGGACAGGGGATG
ACTTTGCCGCTGCTCTTGCCAAGCTTCGGTCAGATAACGGCGGGTCCCTCAAGGGGCTCGTGCTCGATCTGCGGAATAAT
CCCGGCGGCCTTCTGGATGCCGCAGTGGCGGTGGCGGGGCGCTTCGTGGGTGAACGCCTCGACAACGGCCTCATCGTCTA
TACCGAAGGGCGCGAGCACTTTGCCAAGCGAAGCTACAGCGCCACCATCGGCGAGAAAGAGCCGCGCTACCCCCTTGTCG
TCCTTATCAACGGCGGCAGCGCCAGCGCCTCGGAGATCGTGGCCGGTGCCCTCCAGGACCACGGCCGCGCCGTCATCATG
GGAACCACCAGCTTCGGCAAGGGATCGGTTCAGACGGTGGTCCCCCTCAAGGATGGCGCCGGTCTCAAGCTGACCACGGC
CCGTTACTACACCCCCAAGGGACGTTCGATCCAGGCACGGGGCATCGAGCCCGACATCGTCGTAGAACGGGCCGGGTTCA
AGGAACTGCCGGACAAGGGCAGGGCCGGATTCCTCGAAAAGGATTTGGACAACCATCTGTCCGGGGCGGAATCGGGCGAG
GGGGAAAAGACCCCCGAGCAGGACGTGAAAAAGCTCCCGGCGGCGCCGGCGACTCCCGAACACGAGGTTGACAAGGATTA
TCAGCTTCTTCGGGCCCTTGAACTGCTCAAGGGCTGGGATGCCATGCGCAAGGTGGCCACCGCGAAGCACTAG

Upstream 100 bases:

>100_bases
TTTCCTCTCGCCCCTTTGCCGCGAACATTGACAAACACGCTCCGCGACAACTAAAGTATCCGGAGACGCTCCCTTTGACG
GAGCCCCGGAGGTTGTTCCC

Downstream 100 bases:

>100_bases
GCCGTTGGCCGAAATGGAGATGGTGTTGCCGAAACGGGACGTACTCAGCTGAGTACGTCCCGTTTTTTGTTGCCGGACCC
GTAGGTGCAATCCCCTCCCC

Product: carboxy-terminal processing protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MQTRTRITLGLVVAILCLTIGVAAGWRYYNPAADQVGAEHLRLFREVVSIVRSSYVEEVSGKKLLEGAINGMLASLDPHS
SYLPPEPFTEMKTEISGSFGGLGIEISMRDGKLTVVAPIEDTPAWRAGIQSGDHIWKIDDTPTRGLTITQAVKQMRGEKG
TQVSLSILRNGNGKPLVFPLVRDIIKTRSLKSRTLEPGYGYVRISQFQERTGDDFAAALAKLRSDNGGSLKGLVLDLRNN
PGGLLDAAVAVAGRFVGERLDNGLIVYTEGREHFAKRSYSATIGEKEPRYPLVVLINGGSASASEIVAGALQDHGRAVIM
GTTSFGKGSVQTVVPLKDGAGLKLTTARYYTPKGRSIQARGIEPDIVVERAGFKELPDKGRAGFLEKDLDNHLSGAESGE
GEKTPEQDVKKLPAAPATPEHEVDKDYQLLRALELLKGWDAMRKVATAKH

Sequences:

>Translated_450_residues
MQTRTRITLGLVVAILCLTIGVAAGWRYYNPAADQVGAEHLRLFREVVSIVRSSYVEEVSGKKLLEGAINGMLASLDPHS
SYLPPEPFTEMKTEISGSFGGLGIEISMRDGKLTVVAPIEDTPAWRAGIQSGDHIWKIDDTPTRGLTITQAVKQMRGEKG
TQVSLSILRNGNGKPLVFPLVRDIIKTRSLKSRTLEPGYGYVRISQFQERTGDDFAAALAKLRSDNGGSLKGLVLDLRNN
PGGLLDAAVAVAGRFVGERLDNGLIVYTEGREHFAKRSYSATIGEKEPRYPLVVLINGGSASASEIVAGALQDHGRAVIM
GTTSFGKGSVQTVVPLKDGAGLKLTTARYYTPKGRSIQARGIEPDIVVERAGFKELPDKGRAGFLEKDLDNHLSGAESGE
GEKTPEQDVKKLPAAPATPEHEVDKDYQLLRALELLKGWDAMRKVATAKH
>Mature_450_residues
MQTRTRITLGLVVAILCLTIGVAAGWRYYNPAADQVGAEHLRLFREVVSIVRSSYVEEVSGKKLLEGAINGMLASLDPHS
SYLPPEPFTEMKTEISGSFGGLGIEISMRDGKLTVVAPIEDTPAWRAGIQSGDHIWKIDDTPTRGLTITQAVKQMRGEKG
TQVSLSILRNGNGKPLVFPLVRDIIKTRSLKSRTLEPGYGYVRISQFQERTGDDFAAALAKLRSDNGGSLKGLVLDLRNN
PGGLLDAAVAVAGRFVGERLDNGLIVYTEGREHFAKRSYSATIGEKEPRYPLVVLINGGSASASEIVAGALQDHGRAVIM
GTTSFGKGSVQTVVPLKDGAGLKLTTARYYTPKGRSIQARGIEPDIVVERAGFKELPDKGRAGFLEKDLDNHLSGAESGE
GEKTPEQDVKKLPAAPATPEHEVDKDYQLLRALELLKGWDAMRKVATAKH

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=346, Percent_Identity=30.9248554913295, Blast_Score=124, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 48638; Mature: 48638

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTRTRITLGLVVAILCLTIGVAAGWRYYNPAADQVGAEHLRLFREVVSIVRSSYVEEVS
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKKLLEGAINGMLASLDPHSSYLPPEPFTEMKTEISGSFGGLGIEISMRDGKLTVVAPIE
HHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCEEEEEEECC
DTPAWRAGIQSGDHIWKIDDTPTRGLTITQAVKQMRGEKGTQVSLSILRNGNGKPLVFPL
CCCHHHHHCCCCCEEEEECCCCCCCEEHHHHHHHHHCCCCCEEEEEEEECCCCCEEEHHH
VRDIIKTRSLKSRTLEPGYGYVRISQFQERTGDDFAAALAKLRSDNGGSLKGLVLDLRNN
HHHHHHHCCHHHCCCCCCCCEEEEEHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECCC
PGGLLDAAVAVAGRFVGERLDNGLIVYTEGREHFAKRSYSATIGEKEPRYPLVVLINGGS
CCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCEEEEECCCC
ASASEIVAGALQDHGRAVIMGTTSFGKGSVQTVVPLKDGAGLKLTTARYYTPKGRSIQAR
CCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCEEEEC
GIEPDIVVERAGFKELPDKGRAGFLEKDLDNHLSGAESGEGEKTPEQDVKKLPAAPATPE
CCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCC
HEVDKDYQLLRALELLKGWDAMRKVATAKH
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQTRTRITLGLVVAILCLTIGVAAGWRYYNPAADQVGAEHLRLFREVVSIVRSSYVEEVS
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKKLLEGAINGMLASLDPHSSYLPPEPFTEMKTEISGSFGGLGIEISMRDGKLTVVAPIE
HHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCEEEEEEECC
DTPAWRAGIQSGDHIWKIDDTPTRGLTITQAVKQMRGEKGTQVSLSILRNGNGKPLVFPL
CCCHHHHHCCCCCEEEEECCCCCCCEEHHHHHHHHHCCCCCEEEEEEEECCCCCEEEHHH
VRDIIKTRSLKSRTLEPGYGYVRISQFQERTGDDFAAALAKLRSDNGGSLKGLVLDLRNN
HHHHHHHCCHHHCCCCCCCCEEEEEHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECCC
PGGLLDAAVAVAGRFVGERLDNGLIVYTEGREHFAKRSYSATIGEKEPRYPLVVLINGGS
CCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCEEEEECCCC
ASASEIVAGALQDHGRAVIMGTTSFGKGSVQTVVPLKDGAGLKLTTARYYTPKGRSIQAR
CCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCEEEEC
GIEPDIVVERAGFKELPDKGRAGFLEKDLDNHLSGAESGEGEKTPEQDVKKLPAAPATPE
CCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCC
HEVDKDYQLLRALELLKGWDAMRKVATAKH
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]