Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

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The map label for this gene is 39996071

Identifier: 39996071

GI number: 39996071

Start: 1041859

End: 1043229

Strand: Direct

Name: 39996071

Synonym: GSU0968

Alternate gene names: NA

Gene position: 1041859-1043229 (Clockwise)

Preceding gene: 39996070

Following gene: 39996072

Centisome position: 27.32

GC content: 65.21

Gene sequence:

>1371_bases
ATGAACGGCTGGGAGGTTTTCAAGGTATTGTTGTCGGTGGCGATGGTGATGGCAGTGGCGCTGCCGGAACCCGCGCGGGC
CGTTCCAGCCGCTGTCGCCGCCTCTGTGGACAGCACGGCGACCATTCTGTCAGCCGGCTTTGAGTCTCTGGTCCAGGATC
CGCCTGCCGGCTGGAGCCTGGTGGACAATGCCGGCACCGGAGCCCTGTGGCGCTTCGACGATCCGGCAAAGAGGGGCAAC
AACACCGGGGGGACCGGCGGTTTTGCCATTGCAGATAGCGACTATGCCGGCGCCGTCAACATGGATACGGAGCTTCGGAC
CCCGCTCCTGGATCTGAGCGGATATGAAACGGTCACGCTGAGGTTCGAGACCTTGTTCGAACATGAAGCCGGCGAGACTG
CTGCCGTGGAGTTGAGCACGAACGGCGGCGCCGGACCCTGGCAGCCTCTCTGGAGCAGGAGCGGAGGCAACTATGGTCCC
GCCACGGAAGAACTGGACCTCACCTCCCTTGCGGCCGGCAAGCCAAACATCATGATCCGCTTTCACTACTACGGTGCCAA
CTACGCCTGGTACTGGAAAGTGGATGATGTGGCACTGACCGGCATCCCCCGCGCACAGCATCAGCTCGCCGTGACCGTCA
ACGGCAGTGGTACGGTAGCAAGCTCTCCTGCGGGGATTTCCTGCCCGGCGACCACCTGCAGCGCGTTGTTCTATGACGGC
CTCCCGGTGACGCTGACGGCAACGCCCGCTGCGGATTACGTTTTTTCCAGCTGGTCGGGAGCCTGCACCGGCACCGGCCC
CTGCGTGGTCACCCTGGGGGGCGCTGCGGCCGTGACGGCTACCTTTGTGCCGAGCACCCGCAATCTGAACGTGACGGTTT
CCGGCGCCGGACAGGGGACCGTCACCAGTGTTCCGGCCGGAATCGCCTGCTCGGCCGGCAGCTGCAACGGAGCCTTCGAT
ACGGGAAGCCAGGTGGAGCTCATTGCCACGCCGTCCACGGGTTCGGTCTTCGCGGGCTGGTCGGGCGACTGCACCGGCAC
CGGCGCCTGTACTCCGACCATGACCGCCGACCGGAACGTCGGCGCCGCGTTCGACCCCGCACTAACGGTAGAACTCACCA
TCGGCACCGCCACGACGCTCCACACGACCCTGACGGCAGCCATGGCAGCCATTGCCAATGGCTCTGCTGCCGCCATCAAG
GCCAGGGCCATGGAGTTCCCGGAGAGCCTGGCCATCTCCGGCGGAAAATCCATCGTATTCTACGGCGGATACGCCGAAGG
CTTCGGCAGCGTTGCCGGGTACTCGGTCCTGAGGGGGACGGTGACCGTCGGGGTCGGGACGCTCACGGCCAGCAATCTGG
CGGTTCGCTAA

Upstream 100 bases:

>100_bases
CCTTTTTTTATGGCGTCCACTCTAGACCTGATGCCGATAAGCCGATATAACTACATTAGTAGGCTCCATGTTCGCTGCAG
GTACGAAAAGGGAGAAAATC

Downstream 100 bases:

>100_bases
CCTTTGCCCTCTTCCGGCTTTCCGCGGGGGAGGGCAAAGCGGTTCTTCGGATGTTCCGGGATGTTTCCTCTCGCCCCTTT
GCCGCGAACATTGACAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: Kelch Repeat-Containing Protein; Peptidase; LamG Domain-Containing Protein; PKD Domain-Containing Protein; Spore Coat Protein CotH; Peptidase S8/S53 Subtilisin Kexin Sedolisin; Cell Wall/Surface Repeat Protein; IPT/TIG Domain-Containing Protein; Cell Wall/Surface Repeat-Containing Protein; M6 Family Metalloprotease Domain Protein

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MNGWEVFKVLLSVAMVMAVALPEPARAVPAAVAASVDSTATILSAGFESLVQDPPAGWSLVDNAGTGALWRFDDPAKRGN
NTGGTGGFAIADSDYAGAVNMDTELRTPLLDLSGYETVTLRFETLFEHEAGETAAVELSTNGGAGPWQPLWSRSGGNYGP
ATEELDLTSLAAGKPNIMIRFHYYGANYAWYWKVDDVALTGIPRAQHQLAVTVNGSGTVASSPAGISCPATTCSALFYDG
LPVTLTATPAADYVFSSWSGACTGTGPCVVTLGGAAAVTATFVPSTRNLNVTVSGAGQGTVTSVPAGIACSAGSCNGAFD
TGSQVELIATPSTGSVFAGWSGDCTGTGACTPTMTADRNVGAAFDPALTVELTIGTATTLHTTLTAAMAAIANGSAAAIK
ARAMEFPESLAISGGKSIVFYGGYAEGFGSVAGYSVLRGTVTVGVGTLTASNLAVR

Sequences:

>Translated_456_residues
MNGWEVFKVLLSVAMVMAVALPEPARAVPAAVAASVDSTATILSAGFESLVQDPPAGWSLVDNAGTGALWRFDDPAKRGN
NTGGTGGFAIADSDYAGAVNMDTELRTPLLDLSGYETVTLRFETLFEHEAGETAAVELSTNGGAGPWQPLWSRSGGNYGP
ATEELDLTSLAAGKPNIMIRFHYYGANYAWYWKVDDVALTGIPRAQHQLAVTVNGSGTVASSPAGISCPATTCSALFYDG
LPVTLTATPAADYVFSSWSGACTGTGPCVVTLGGAAAVTATFVPSTRNLNVTVSGAGQGTVTSVPAGIACSAGSCNGAFD
TGSQVELIATPSTGSVFAGWSGDCTGTGACTPTMTADRNVGAAFDPALTVELTIGTATTLHTTLTAAMAAIANGSAAAIK
ARAMEFPESLAISGGKSIVFYGGYAEGFGSVAGYSVLRGTVTVGVGTLTASNLAVR
>Mature_456_residues
MNGWEVFKVLLSVAMVMAVALPEPARAVPAAVAASVDSTATILSAGFESLVQDPPAGWSLVDNAGTGALWRFDDPAKRGN
NTGGTGGFAIADSDYAGAVNMDTELRTPLLDLSGYETVTLRFETLFEHEAGETAAVELSTNGGAGPWQPLWSRSGGNYGP
ATEELDLTSLAAGKPNIMIRFHYYGANYAWYWKVDDVALTGIPRAQHQLAVTVNGSGTVASSPAGISCPATTCSALFYDG
LPVTLTATPAADYVFSSWSGACTGTGPCVVTLGGAAAVTATFVPSTRNLNVTVSGAGQGTVTSVPAGIACSAGSCNGAFD
TGSQVELIATPSTGSVFAGWSGDCTGTGACTPTMTADRNVGAAFDPALTVELTIGTATTLHTTLTAAMAAIANGSAAAIK
ARAMEFPESLAISGGKSIVFYGGYAEGFGSVAGYSVLRGTVTVGVGTLTASNLAVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46042; Mature: 46042

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGWEVFKVLLSVAMVMAVALPEPARAVPAAVAASVDSTATILSAGFESLVQDPPAGWSL
CCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEE
VDNAGTGALWRFDDPAKRGNNTGGTGGFAIADSDYAGAVNMDTELRTPLLDLSGYETVTL
EECCCCCEEEECCCHHHCCCCCCCCCCEEEECCCCCCEEECCCHHCCCEECCCCCEEEEE
RFETLFEHEAGETAAVELSTNGGAGPWQPLWSRSGGNYGPATEELDLTSLAAGKPNIMIR
EEEEEHHCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEE
FHYYGANYAWYWKVDDVALTGIPRAQHQLAVTVNGSGTVASSPAGISCPATTCSALFYDG
EEEECCCEEEEEEECCEEEECCCCCCEEEEEEECCCCCEECCCCCCCCCHHHHHHHHCCC
LPVTLTATPAADYVFSSWSGACTGTGPCVVTLGGAAAVTATFVPSTRNLNVTVSGAGQGT
CCEEEEECCCCCHHCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEECCCCCC
VTSVPAGIACSAGSCNGAFDTGSQVELIATPSTGSVFAGWSGDCTGTGACTPTMTADRNV
EEECCCCEEECCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCC
GAAFDPALTVELTIGTATTLHTTLTAAMAAIANGSAAAIKARAMEFPESLAISGGKSIVF
CCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHEEEEHHHHCCHHHEECCCCEEEE
YGGYAEGFGSVAGYSVLRGTVTVGVGTLTASNLAVR
ECCCHHCCCCHHHHHHEEEEEEEEEEEEEECCEECC
>Mature Secondary Structure
MNGWEVFKVLLSVAMVMAVALPEPARAVPAAVAASVDSTATILSAGFESLVQDPPAGWSL
CCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEE
VDNAGTGALWRFDDPAKRGNNTGGTGGFAIADSDYAGAVNMDTELRTPLLDLSGYETVTL
EECCCCCEEEECCCHHHCCCCCCCCCCEEEECCCCCCEEECCCHHCCCEECCCCCEEEEE
RFETLFEHEAGETAAVELSTNGGAGPWQPLWSRSGGNYGPATEELDLTSLAAGKPNIMIR
EEEEEHHCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEE
FHYYGANYAWYWKVDDVALTGIPRAQHQLAVTVNGSGTVASSPAGISCPATTCSALFYDG
EEEECCCEEEEEEECCEEEECCCCCCEEEEEEECCCCCEECCCCCCCCCHHHHHHHHCCC
LPVTLTATPAADYVFSSWSGACTGTGPCVVTLGGAAAVTATFVPSTRNLNVTVSGAGQGT
CCEEEEECCCCCHHCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEECCCCCC
VTSVPAGIACSAGSCNGAFDTGSQVELIATPSTGSVFAGWSGDCTGTGACTPTMTADRNV
EEECCCCEEECCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCC
GAAFDPALTVELTIGTATTLHTTLTAAMAAIANGSAAAIKARAMEFPESLAISGGKSIVF
CCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHEEEEHHHHCCHHHEECCCCEEEE
YGGYAEGFGSVAGYSVLRGTVTVGVGTLTASNLAVR
ECCCHHCCCCHHHHHHEEEEEEEEEEEEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA