| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996071
Identifier: 39996071
GI number: 39996071
Start: 1041859
End: 1043229
Strand: Direct
Name: 39996071
Synonym: GSU0968
Alternate gene names: NA
Gene position: 1041859-1043229 (Clockwise)
Preceding gene: 39996070
Following gene: 39996072
Centisome position: 27.32
GC content: 65.21
Gene sequence:
>1371_bases ATGAACGGCTGGGAGGTTTTCAAGGTATTGTTGTCGGTGGCGATGGTGATGGCAGTGGCGCTGCCGGAACCCGCGCGGGC CGTTCCAGCCGCTGTCGCCGCCTCTGTGGACAGCACGGCGACCATTCTGTCAGCCGGCTTTGAGTCTCTGGTCCAGGATC CGCCTGCCGGCTGGAGCCTGGTGGACAATGCCGGCACCGGAGCCCTGTGGCGCTTCGACGATCCGGCAAAGAGGGGCAAC AACACCGGGGGGACCGGCGGTTTTGCCATTGCAGATAGCGACTATGCCGGCGCCGTCAACATGGATACGGAGCTTCGGAC CCCGCTCCTGGATCTGAGCGGATATGAAACGGTCACGCTGAGGTTCGAGACCTTGTTCGAACATGAAGCCGGCGAGACTG CTGCCGTGGAGTTGAGCACGAACGGCGGCGCCGGACCCTGGCAGCCTCTCTGGAGCAGGAGCGGAGGCAACTATGGTCCC GCCACGGAAGAACTGGACCTCACCTCCCTTGCGGCCGGCAAGCCAAACATCATGATCCGCTTTCACTACTACGGTGCCAA CTACGCCTGGTACTGGAAAGTGGATGATGTGGCACTGACCGGCATCCCCCGCGCACAGCATCAGCTCGCCGTGACCGTCA ACGGCAGTGGTACGGTAGCAAGCTCTCCTGCGGGGATTTCCTGCCCGGCGACCACCTGCAGCGCGTTGTTCTATGACGGC CTCCCGGTGACGCTGACGGCAACGCCCGCTGCGGATTACGTTTTTTCCAGCTGGTCGGGAGCCTGCACCGGCACCGGCCC CTGCGTGGTCACCCTGGGGGGCGCTGCGGCCGTGACGGCTACCTTTGTGCCGAGCACCCGCAATCTGAACGTGACGGTTT CCGGCGCCGGACAGGGGACCGTCACCAGTGTTCCGGCCGGAATCGCCTGCTCGGCCGGCAGCTGCAACGGAGCCTTCGAT ACGGGAAGCCAGGTGGAGCTCATTGCCACGCCGTCCACGGGTTCGGTCTTCGCGGGCTGGTCGGGCGACTGCACCGGCAC CGGCGCCTGTACTCCGACCATGACCGCCGACCGGAACGTCGGCGCCGCGTTCGACCCCGCACTAACGGTAGAACTCACCA TCGGCACCGCCACGACGCTCCACACGACCCTGACGGCAGCCATGGCAGCCATTGCCAATGGCTCTGCTGCCGCCATCAAG GCCAGGGCCATGGAGTTCCCGGAGAGCCTGGCCATCTCCGGCGGAAAATCCATCGTATTCTACGGCGGATACGCCGAAGG CTTCGGCAGCGTTGCCGGGTACTCGGTCCTGAGGGGGACGGTGACCGTCGGGGTCGGGACGCTCACGGCCAGCAATCTGG CGGTTCGCTAA
Upstream 100 bases:
>100_bases CCTTTTTTTATGGCGTCCACTCTAGACCTGATGCCGATAAGCCGATATAACTACATTAGTAGGCTCCATGTTCGCTGCAG GTACGAAAAGGGAGAAAATC
Downstream 100 bases:
>100_bases CCTTTGCCCTCTTCCGGCTTTCCGCGGGGGAGGGCAAAGCGGTTCTTCGGATGTTCCGGGATGTTTCCTCTCGCCCCTTT GCCGCGAACATTGACAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: Kelch Repeat-Containing Protein; Peptidase; LamG Domain-Containing Protein; PKD Domain-Containing Protein; Spore Coat Protein CotH; Peptidase S8/S53 Subtilisin Kexin Sedolisin; Cell Wall/Surface Repeat Protein; IPT/TIG Domain-Containing Protein; Cell Wall/Surface Repeat-Containing Protein; M6 Family Metalloprotease Domain Protein
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MNGWEVFKVLLSVAMVMAVALPEPARAVPAAVAASVDSTATILSAGFESLVQDPPAGWSLVDNAGTGALWRFDDPAKRGN NTGGTGGFAIADSDYAGAVNMDTELRTPLLDLSGYETVTLRFETLFEHEAGETAAVELSTNGGAGPWQPLWSRSGGNYGP ATEELDLTSLAAGKPNIMIRFHYYGANYAWYWKVDDVALTGIPRAQHQLAVTVNGSGTVASSPAGISCPATTCSALFYDG LPVTLTATPAADYVFSSWSGACTGTGPCVVTLGGAAAVTATFVPSTRNLNVTVSGAGQGTVTSVPAGIACSAGSCNGAFD TGSQVELIATPSTGSVFAGWSGDCTGTGACTPTMTADRNVGAAFDPALTVELTIGTATTLHTTLTAAMAAIANGSAAAIK ARAMEFPESLAISGGKSIVFYGGYAEGFGSVAGYSVLRGTVTVGVGTLTASNLAVR
Sequences:
>Translated_456_residues MNGWEVFKVLLSVAMVMAVALPEPARAVPAAVAASVDSTATILSAGFESLVQDPPAGWSLVDNAGTGALWRFDDPAKRGN NTGGTGGFAIADSDYAGAVNMDTELRTPLLDLSGYETVTLRFETLFEHEAGETAAVELSTNGGAGPWQPLWSRSGGNYGP ATEELDLTSLAAGKPNIMIRFHYYGANYAWYWKVDDVALTGIPRAQHQLAVTVNGSGTVASSPAGISCPATTCSALFYDG LPVTLTATPAADYVFSSWSGACTGTGPCVVTLGGAAAVTATFVPSTRNLNVTVSGAGQGTVTSVPAGIACSAGSCNGAFD TGSQVELIATPSTGSVFAGWSGDCTGTGACTPTMTADRNVGAAFDPALTVELTIGTATTLHTTLTAAMAAIANGSAAAIK ARAMEFPESLAISGGKSIVFYGGYAEGFGSVAGYSVLRGTVTVGVGTLTASNLAVR >Mature_456_residues MNGWEVFKVLLSVAMVMAVALPEPARAVPAAVAASVDSTATILSAGFESLVQDPPAGWSLVDNAGTGALWRFDDPAKRGN NTGGTGGFAIADSDYAGAVNMDTELRTPLLDLSGYETVTLRFETLFEHEAGETAAVELSTNGGAGPWQPLWSRSGGNYGP ATEELDLTSLAAGKPNIMIRFHYYGANYAWYWKVDDVALTGIPRAQHQLAVTVNGSGTVASSPAGISCPATTCSALFYDG LPVTLTATPAADYVFSSWSGACTGTGPCVVTLGGAAAVTATFVPSTRNLNVTVSGAGQGTVTSVPAGIACSAGSCNGAFD TGSQVELIATPSTGSVFAGWSGDCTGTGACTPTMTADRNVGAAFDPALTVELTIGTATTLHTTLTAAMAAIANGSAAAIK ARAMEFPESLAISGGKSIVFYGGYAEGFGSVAGYSVLRGTVTVGVGTLTASNLAVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46042; Mature: 46042
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGWEVFKVLLSVAMVMAVALPEPARAVPAAVAASVDSTATILSAGFESLVQDPPAGWSL CCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEE VDNAGTGALWRFDDPAKRGNNTGGTGGFAIADSDYAGAVNMDTELRTPLLDLSGYETVTL EECCCCCEEEECCCHHHCCCCCCCCCCEEEECCCCCCEEECCCHHCCCEECCCCCEEEEE RFETLFEHEAGETAAVELSTNGGAGPWQPLWSRSGGNYGPATEELDLTSLAAGKPNIMIR EEEEEHHCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEE FHYYGANYAWYWKVDDVALTGIPRAQHQLAVTVNGSGTVASSPAGISCPATTCSALFYDG EEEECCCEEEEEEECCEEEECCCCCCEEEEEEECCCCCEECCCCCCCCCHHHHHHHHCCC LPVTLTATPAADYVFSSWSGACTGTGPCVVTLGGAAAVTATFVPSTRNLNVTVSGAGQGT CCEEEEECCCCCHHCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEECCCCCC VTSVPAGIACSAGSCNGAFDTGSQVELIATPSTGSVFAGWSGDCTGTGACTPTMTADRNV EEECCCCEEECCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCC GAAFDPALTVELTIGTATTLHTTLTAAMAAIANGSAAAIKARAMEFPESLAISGGKSIVF CCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHEEEEHHHHCCHHHEECCCCEEEE YGGYAEGFGSVAGYSVLRGTVTVGVGTLTASNLAVR ECCCHHCCCCHHHHHHEEEEEEEEEEEEEECCEECC >Mature Secondary Structure MNGWEVFKVLLSVAMVMAVALPEPARAVPAAVAASVDSTATILSAGFESLVQDPPAGWSL CCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEE VDNAGTGALWRFDDPAKRGNNTGGTGGFAIADSDYAGAVNMDTELRTPLLDLSGYETVTL EECCCCCEEEECCCHHHCCCCCCCCCCEEEECCCCCCEEECCCHHCCCEECCCCCEEEEE RFETLFEHEAGETAAVELSTNGGAGPWQPLWSRSGGNYGPATEELDLTSLAAGKPNIMIR EEEEEHHCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEE FHYYGANYAWYWKVDDVALTGIPRAQHQLAVTVNGSGTVASSPAGISCPATTCSALFYDG EEEECCCEEEEEEECCEEEECCCCCCEEEEEEECCCCCEECCCCCCCCCHHHHHHHHCCC LPVTLTATPAADYVFSSWSGACTGTGPCVVTLGGAAAVTATFVPSTRNLNVTVSGAGQGT CCEEEEECCCCCHHCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEECCCCCC VTSVPAGIACSAGSCNGAFDTGSQVELIATPSTGSVFAGWSGDCTGTGACTPTMTADRNV EEECCCCEEECCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCC GAAFDPALTVELTIGTATTLHTTLTAAMAAIANGSAAAIKARAMEFPESLAISGGKSIVF CCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHEEEEHHHHCCHHHEECCCCEEEE YGGYAEGFGSVAGYSVLRGTVTVGVGTLTASNLAVR ECCCHHCCCCHHHHHHEEEEEEEEEEEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA