| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is 39996005
Identifier: 39996005
GI number: 39996005
Start: 966579
End: 967520
Strand: Reverse
Name: 39996005
Synonym: GSU0900
Alternate gene names: NA
Gene position: 967520-966579 (Counterclockwise)
Preceding gene: 39996007
Following gene: 39996001
Centisome position: 25.37
GC content: 67.62
Gene sequence:
>942_bases ATGAAACGCATTCTGCTTCCCCTGCTCATCTGTCCCGCCTGCCTTCCCAAGGAACACCCCCTGGACCTCTCCGGGGCCGG TGAACAGGCCGAAGACATCGTGAGCGGCACCCTCTCCTGCCGCAGGTGCCGTCGCCGCTACCCGATCCGCGAAGGGGTGG CGCTCTTGCTGCCGGAACCGGAGGAAGGGCCATGGGGGGGACAATGGAAGTACGAGGAGGCGGCAACGGTGAACTCCTAC CTCTGGAGCCACTTTGCCGACCTGATGGGGGACCTCGATGCGGGAACGGCTTACGGCGATTGGGCGGGGTGTCTTGCCAT CGGCGGCGGGCGAGCATTCGACGCCGGGTGCGCCGTGGGGCGGCTGACCTTCGAGATGGCACAGCGGAGCGAGATTGCCG TGGGGTGCGACCTGTCCGTCGCCTTCGTGCGCACGGCCCGGCGGCTGGCCGCCGAGGGAAGGATCGACTTCTCGCTCCCC CTGGAGGGAAACCTGCGGGAGGAATTCCGGATCGAGCTGCCCGGCCACTGGCAGACCGACCGGACCGAATTCGTGGTGGC CGATGCCCTCAGGATACCCTTTGCGCGGGGCAGCTTCGACCAGACCGCGTCCCTCAACCTGGTGGACCGGGTCCGCCACC CCCTGGCCCACCTCTACGAGGTCAACCGCGTGGCGTTGGCCGCCGGCGCATCCTTCCTCTTCTCCGATCCCTTTTCCTGG TCCACGGCCAACACCCCCGAGGAGGCATGGCTCGGCGGTACCGCCGGAGGGCCCTACGCAGGTCGGGGAATCGACAACGT CCGCGCTCTCCTGGAGGGAAAGGACGGCATCATCGCCCCACCCTGGCGCATCGACCGGCAGGGGAGCGTTGACTGGAAGC TCCGCTCCCACCACAACCACTTCGAACTGGTCAGGAGCCGGTTTCTCGCGGCTTCCCGCTGA
Upstream 100 bases:
>100_bases CCGGCACCTGCTGGAGCGGGAGGGGCTGTTCCACCCCTTCCTCGCCGCCATCCACGATTGACCACTCCCCCCAGCGGCAT CCCCCTGCGGGAGGTATCCC
Downstream 100 bases:
>100_bases AAACCGGCACGACTGGCCGCCCCTCTACCGTCCGAGCCCCATGAGCAGCACGTTGAAAGACCCCATCACGAAGCCCAGCA GGGCTCCGAAGAGATTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: Generic Methyltransferase; Meiotically Up-Regulated Gene; Cytoplasmic Protein; Methyltransferase; SAM-Dependent Methyltransferase; Conserved Domain Protein; Conserved Protein; Methyltransferase Domain Family
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MKRILLPLLICPACLPKEHPLDLSGAGEQAEDIVSGTLSCRRCRRRYPIREGVALLLPEPEEGPWGGQWKYEEAATVNSY LWSHFADLMGDLDAGTAYGDWAGCLAIGGGRAFDAGCAVGRLTFEMAQRSEIAVGCDLSVAFVRTARRLAAEGRIDFSLP LEGNLREEFRIELPGHWQTDRTEFVVADALRIPFARGSFDQTASLNLVDRVRHPLAHLYEVNRVALAAGASFLFSDPFSW STANTPEEAWLGGTAGGPYAGRGIDNVRALLEGKDGIIAPPWRIDRQGSVDWKLRSHHNHFELVRSRFLAASR
Sequences:
>Translated_313_residues MKRILLPLLICPACLPKEHPLDLSGAGEQAEDIVSGTLSCRRCRRRYPIREGVALLLPEPEEGPWGGQWKYEEAATVNSY LWSHFADLMGDLDAGTAYGDWAGCLAIGGGRAFDAGCAVGRLTFEMAQRSEIAVGCDLSVAFVRTARRLAAEGRIDFSLP LEGNLREEFRIELPGHWQTDRTEFVVADALRIPFARGSFDQTASLNLVDRVRHPLAHLYEVNRVALAAGASFLFSDPFSW STANTPEEAWLGGTAGGPYAGRGIDNVRALLEGKDGIIAPPWRIDRQGSVDWKLRSHHNHFELVRSRFLAASR >Mature_313_residues MKRILLPLLICPACLPKEHPLDLSGAGEQAEDIVSGTLSCRRCRRRYPIREGVALLLPEPEEGPWGGQWKYEEAATVNSY LWSHFADLMGDLDAGTAYGDWAGCLAIGGGRAFDAGCAVGRLTFEMAQRSEIAVGCDLSVAFVRTARRLAAEGRIDFSLP LEGNLREEFRIELPGHWQTDRTEFVVADALRIPFARGSFDQTASLNLVDRVRHPLAHLYEVNRVALAAGASFLFSDPFSW STANTPEEAWLGGTAGGPYAGRGIDNVRALLEGKDGIIAPPWRIDRQGSVDWKLRSHHNHFELVRSRFLAASR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34499; Mature: 34499
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILLPLLICPACLPKEHPLDLSGAGEQAEDIVSGTLSCRRCRRRYPIREGVALLLPEP CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCEEEEECCC EEGPWGGQWKYEEAATVNSYLWSHFADLMGDLDAGTAYGDWAGCLAIGGGRAFDAGCAVG CCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEECCCCCCCCCHHHH RLTFEMAQRSEIAVGCDLSVAFVRTARRLAAEGRIDFSLPLEGNLREEFRIELPGHWQTD HHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCCCC RTEFVVADALRIPFARGSFDQTASLNLVDRVRHPLAHLYEVNRVALAAGASFLFSDPFSW CCCEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCC STANTPEEAWLGGTAGGPYAGRGIDNVRALLEGKDGIIAPPWRIDRQGSVDWKLRSHHNH CCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCCCEEECCCCCH FELVRSRFLAASR HHHHHHHHHHCCC >Mature Secondary Structure MKRILLPLLICPACLPKEHPLDLSGAGEQAEDIVSGTLSCRRCRRRYPIREGVALLLPEP CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCEEEEECCC EEGPWGGQWKYEEAATVNSYLWSHFADLMGDLDAGTAYGDWAGCLAIGGGRAFDAGCAVG CCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEECCCCCCCCCHHHH RLTFEMAQRSEIAVGCDLSVAFVRTARRLAAEGRIDFSLPLEGNLREEFRIELPGHWQTD HHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCCCC RTEFVVADALRIPFARGSFDQTASLNLVDRVRHPLAHLYEVNRVALAAGASFLFSDPFSW CCCEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCC STANTPEEAWLGGTAGGPYAGRGIDNVRALLEGKDGIIAPPWRIDRQGSVDWKLRSHHNH CCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCCCEEECCCCCH FELVRSRFLAASR HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA