Click here to switch to the map view.

The map label for this gene is 39996007

Identifier: 39996007

GI number: 39996007

Start: 970535

End: 971404

Strand: Reverse

Name: 39996007

Synonym: GSU0904

Alternate gene names: NA

Gene position: 971404-970535 (Counterclockwise)

Preceding gene: 39996008

Following gene: 39996005

Centisome position: 25.47

GC content: 62.41

Gene sequence:

>870_bases
ATGGCGCATCCTGACCGCGACCGGATATCACTTGAGCGGCTCGTGGAGGAGACGGTAACGGTCTACTCCCTCCCCTTCTT
CTACGAGCGCCTCAACGAGGCCATCAACCATCCCCGTAGCTCCATCGCCGACATCGGCCGGATCATCACCGAGGACCAGG
GTCTCACGGCGCGCATCCTCAAGCTCGCCAACAGCCCCCTGTTCGGCTACCACTCCCGAGTCGACTCCATCACCAGGGCG
CTGACCATCATCGGCACCCAGCAACTGCGCGACCTGGCCCTGGCCGCCTCGGTCATGGGCATTTTCAAGGGGATTCCGGA
AGACCTGATGGGGATGACTTCCTTCTGGAAGCACAGCATCGCCTGCGGGACCATTGCCCGAAATCTGGCCACCAGCCGCC
GCGAGGTGAACGTGGAGCGGTTCTTCGTGGCCGGCATGCTGCACGATCTGGGACAGTTGGTCATGTGTACCGCCATTCCC
GGCACGGTTCGGGAGATGCTGGAGGAGAGCCGTGACAACGAGTCGCTCCATTTCGCCACGGAGCGTCGCCGGCTCGGCTT
CGACCACGCCAAGGTGGGAGGAGCCATCCTGAAAAAATGGAAGATCCCGCCGAACATCGCCGAGCCCGTGGCCTGCCACC
ACATTCCGGCAAAGGCGGAGCAGTTTCCCCTTGAGACGTCGATCATCCACCTGGCAGACATAATCTGCCAGGCCATGGAA
TTCGGTTTCAGCGGCGAATGGTACGTCCCCCCCCTGGCCACCGAGGCATGGGACCGGGTCGGCATCCCGGTCAGCATGCT
CGGCGCGATCATCAGGCAATCGGAGCAGCAGCTGGAAGAAACGTTTGCCATCCTGACGGAGAACGGATGA

Upstream 100 bases:

>100_bases
ACCGCTGAAGAAGCCCTGCGCCCCCTCTTCCTCCACACGGACCTGAAACATCCGGCCATGCGTGAGATCATGCGCCTCGG
GGCGGTGAGAAAGGCCATGC

Downstream 100 bases:

>100_bases
CCGGCACGATCCACGCCATATCCCCGACCGACCCGCGGGAGGAACGGATCCGCTACCTTGAGGAGTCCAATCTCCGCTAC
GTGGCGATTCTGGACATGCT

Product: HD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MAHPDRDRISLERLVEETVTVYSLPFFYERLNEAINHPRSSIADIGRIITEDQGLTARILKLANSPLFGYHSRVDSITRA
LTIIGTQQLRDLALAASVMGIFKGIPEDLMGMTSFWKHSIACGTIARNLATSRREVNVERFFVAGMLHDLGQLVMCTAIP
GTVREMLEESRDNESLHFATERRRLGFDHAKVGGAILKKWKIPPNIAEPVACHHIPAKAEQFPLETSIIHLADIICQAME
FGFSGEWYVPPLATEAWDRVGIPVSMLGAIIRQSEQQLEETFAILTENG

Sequences:

>Translated_289_residues
MAHPDRDRISLERLVEETVTVYSLPFFYERLNEAINHPRSSIADIGRIITEDQGLTARILKLANSPLFGYHSRVDSITRA
LTIIGTQQLRDLALAASVMGIFKGIPEDLMGMTSFWKHSIACGTIARNLATSRREVNVERFFVAGMLHDLGQLVMCTAIP
GTVREMLEESRDNESLHFATERRRLGFDHAKVGGAILKKWKIPPNIAEPVACHHIPAKAEQFPLETSIIHLADIICQAME
FGFSGEWYVPPLATEAWDRVGIPVSMLGAIIRQSEQQLEETFAILTENG
>Mature_288_residues
AHPDRDRISLERLVEETVTVYSLPFFYERLNEAINHPRSSIADIGRIITEDQGLTARILKLANSPLFGYHSRVDSITRAL
TIIGTQQLRDLALAASVMGIFKGIPEDLMGMTSFWKHSIACGTIARNLATSRREVNVERFFVAGMLHDLGQLVMCTAIPG
TVREMLEESRDNESLHFATERRRLGFDHAKVGGAILKKWKIPPNIAEPVACHHIPAKAEQFPLETSIIHLADIICQAMEF
GFSGEWYVPPLATEAWDRVGIPVSMLGAIIRQSEQQLEETFAILTENG

Specific function: Unknown

COG id: COG1639

COG function: function code T; Predicted signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR013976 [H]

Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 32305; Mature: 32173

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHPDRDRISLERLVEETVTVYSLPFFYERLNEAINHPRSSIADIGRIITEDQGLTARIL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHH
KLANSPLFGYHSRVDSITRALTIIGTQQLRDLALAASVMGIFKGIPEDLMGMTSFWKHSI
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ACGTIARNLATSRREVNVERFFVAGMLHDLGQLVMCTAIPGTVREMLEESRDNESLHFAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHH
ERRRLGFDHAKVGGAILKKWKIPPNIAEPVACHHIPAKAEQFPLETSIIHLADIICQAME
HHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHH
FGFSGEWYVPPLATEAWDRVGIPVSMLGAIIRQSEQQLEETFAILTENG
CCCCCCEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AHPDRDRISLERLVEETVTVYSLPFFYERLNEAINHPRSSIADIGRIITEDQGLTARIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHH
KLANSPLFGYHSRVDSITRALTIIGTQQLRDLALAASVMGIFKGIPEDLMGMTSFWKHSI
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ACGTIARNLATSRREVNVERFFVAGMLHDLGQLVMCTAIPGTVREMLEESRDNESLHFAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHH
ERRRLGFDHAKVGGAILKKWKIPPNIAEPVACHHIPAKAEQFPLETSIIHLADIICQAME
HHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHH
FGFSGEWYVPPLATEAWDRVGIPVSMLGAIIRQSEQQLEETFAILTENG
CCCCCCEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]