| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995981
Identifier: 39995981
GI number: 39995981
Start: 932951
End: 933607
Strand: Direct
Name: 39995981
Synonym: GSU0875
Alternate gene names: NA
Gene position: 932951-933607 (Clockwise)
Preceding gene: 39995977
Following gene: 39995982
Centisome position: 24.46
GC content: 64.84
Gene sequence:
>657_bases GTGTGGGAATGCGTTAGACAGTATATACAGGTGGGAATGGTGCCGCAACCCCTTGCGGGAAGTTGGAACCCGTGGCCGGT CGGCCGGCGCAGCAACGTGGCGTTTATACTGGACAGGGGCCTCCGGTTCGCCGAAGGTCCCTGTCCGGTCACTCGGTCAG TTCTGCCGGTCCTTGGCGCGCTGCTGGCGTTTTTCCCAGCGGTCGCGCGCCCGGTCGCGCGCCTCGTCGGCCTTCTGCCG CTGCTCCGGGGTGAGGATGGCGCCGATCCGGTCGTGGTAGCGATCTCGGATCTCGCGCATCTTCTCGCGTTTCTGGGTGC GGTTCAGGGACGCATCGTCACGGACGGCCTTCATCTCTCCGTTTTCCTCGGCCAGGATCGGAGCGATGGCCGTCTTCTGT TCCTCGGTCAGCCCCAGATGCCGCTCCATCCGTTTCAGTCGCTCGGCCGGGTCCATCTTCTTCACTCCGCCGCCGCCCCG CACTTTGCCCATCCCGGCTCCGGGCGCCGGGTCGGTCTGGGCCAGGACCGCCTGCTGGGTGCCGGCCAAAGCTGCGACGG CGGTCAGTGCCGCCAGGGCAAGTTTGATTCTTCTGCGCATGGTGTGACTCCTTTCAGTGCGGCATCTGCCGCTGTTGTCA TGATATGTCCGATTTAA
Upstream 100 bases:
>100_bases AAGACCAGTCCGCACAGAAGCGCCAGCGGAACCGCGACGTACAGCAGGATCTTTTTCCAGGAGGGAAGGGTCATGGGGGT GAGTCCTCGGAACCGGGCGG
Downstream 100 bases:
>100_bases CGGAGCCGCGGAGAATCGGTTGACAGGGCGCCTCGTCCGCCCGGATAATGGCCCGGCCGAACTGCCGGAGGAAGCCCATG TCCGATCGCTGCACCCTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MWECVRQYIQVGMVPQPLAGSWNPWPVGRRSNVAFILDRGLRFAEGPCPVTRSVLPVLGALLAFFPAVARPVARLVGLLP LLRGEDGADPVVVAISDLAHLLAFLGAVQGRIVTDGLHLSVFLGQDRSDGRLLFLGQPQMPLHPFQSLGRVHLLHSAAAP HFAHPGSGRRVGLGQDRLLGAGQSCDGGQCRQGKFDSSAHGVTPFSAASAAVVMICPI
Sequences:
>Translated_218_residues MWECVRQYIQVGMVPQPLAGSWNPWPVGRRSNVAFILDRGLRFAEGPCPVTRSVLPVLGALLAFFPAVARPVARLVGLLP LLRGEDGADPVVVAISDLAHLLAFLGAVQGRIVTDGLHLSVFLGQDRSDGRLLFLGQPQMPLHPFQSLGRVHLLHSAAAP HFAHPGSGRRVGLGQDRLLGAGQSCDGGQCRQGKFDSSAHGVTPFSAASAAVVMICPI >Mature_218_residues MWECVRQYIQVGMVPQPLAGSWNPWPVGRRSNVAFILDRGLRFAEGPCPVTRSVLPVLGALLAFFPAVARPVARLVGLLP LLRGEDGADPVVVAISDLAHLLAFLGAVQGRIVTDGLHLSVFLGQDRSDGRLLFLGQPQMPLHPFQSLGRVHLLHSAAAP HFAHPGSGRRVGLGQDRLLGAGQSCDGGQCRQGKFDSSAHGVTPFSAASAAVVMICPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23114; Mature: 23114
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWECVRQYIQVGMVPQPLAGSWNPWPVGRRSNVAFILDRGLRFAEGPCPVTRSVLPVLGA CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH LLAFFPAVARPVARLVGLLPLLRGEDGADPVVVAISDLAHLLAFLGAVQGRIVTDGLHLS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCEEEECCEEEE VFLGQDRSDGRLLFLGQPQMPLHPFQSLGRVHLLHSAAAPHFAHPGSGRRVGLGQDRLLG EEECCCCCCCEEEEEECCCCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCEECCCCHHHCC AGQSCDGGQCRQGKFDSSAHGVTPFSAASAAVVMICPI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MWECVRQYIQVGMVPQPLAGSWNPWPVGRRSNVAFILDRGLRFAEGPCPVTRSVLPVLGA CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH LLAFFPAVARPVARLVGLLPLLRGEDGADPVVVAISDLAHLLAFLGAVQGRIVTDGLHLS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCEEEECCEEEE VFLGQDRSDGRLLFLGQPQMPLHPFQSLGRVHLLHSAAAPHFAHPGSGRRVGLGQDRLLG EEECCCCCCCEEEEEECCCCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCEECCCCHHHCC AGQSCDGGQCRQGKFDSSAHGVTPFSAASAAVVMICPI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA