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The map label for this gene is 39995765

Identifier: 39995765

GI number: 39995765

Start: 696137

End: 696889

Strand: Direct

Name: 39995765

Synonym: GSU0659

Alternate gene names: NA

Gene position: 696137-696889 (Clockwise)

Preceding gene: 39995764

Following gene: 39995766

Centisome position: 18.25

GC content: 64.41

Gene sequence:

>753_bases
GTGACAGCGGTCGAGGCGGGAGAGGGAGGCGACGACGGTTATGCCGCTCTGCGGCAGCGCGTGGTTGAGCGATTTGCCGG
ACGAGCACCGACCCAGTGGGGCGAACGGGTTGCAGGTGTTATTACGCATCTTCGGTCTGGCACCAATGGGGTTGCCCTGA
CCCTGGACGCCTGCGGAACCGCCCGGGGCAAAGGGATCGACAGCCGCCTTATCGCCTTTCTGGAGCGGGAAGGAGTCCCG
GCAACCCTGTTTGTCACTGGTCGCTGGATAGAGGCAAATCCTGGCGAGTTCCGGCGACTGGCCGCAAACCCTCTGTTCGA
GATCGCCAACCATGGCGACCGGCATCGCCCTGCCTCGGTCGCGGGGCGGTCGGCCTACGGTATTGCCGGCACGGCCGATG
TCGCCGCACTGGTTGACGAAATAGAGCTCAATGCACGCCGCATCCAGGAAGTGACCGGTCGGAGACCCCGATTCTTCCGT
TCCGGGACCGCCTACTATGATGAGGTTGCCGTGGAGGTCGCCGGCGTTCTTGGGCATCGGGTGGCCGGCTTTTCGGTCCT
AGGTGATGCCGGGGCAACCTTCTCTGTCGAGCAGGTCCGACGGGCGTTGCTGGCGGCGACACCCGGTGATGTGGTTATAC
TCCATATGAATCATCCGGAGAGCGGAACCGCCGCCGGCGTTGAGGCTGCAATCCCCCTGCTGCGGACCAGGGGGCTGCGG
TTTGTGACTCTCTCGGAGGGGATGGGTGACTGA

Upstream 100 bases:

>100_bases
TACCTGACTGGGCGAGGTGATCAGCGTGACGGCACGACGGATATGTACGATAGCAAGGGCATTAGTGGCAGTCATTGTTC
TGCTTGCCGTGAGTCGGCCG

Downstream 100 bases:

>100_bases
GGTGATTTCCCCTTGCGTTACCCGGGCTTTTGCTTTACAAAAAAATCTTTCCATTTTTCCCCAGGTGGATGCGACGTGAA
GAAGCTGACGCTCAAGGCCC

Product: polysaccharide deacetylase domain-containing protein

Products: NA

Alternate protein names: Lipoprotein; Polysaccharide Deacetylase Family Sporulation Protein PdaB; Polysaccharide Deacetylase Domain-Containing Protein; Polysaccharide Deacetylase Protein; Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Family Protein

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTAVEAGEGGDDGYAALRQRVVERFAGRAPTQWGERVAGVITHLRSGTNGVALTLDACGTARGKGIDSRLIAFLEREGVP
ATLFVTGRWIEANPGEFRRLAANPLFEIANHGDRHRPASVAGRSAYGIAGTADVAALVDEIELNARRIQEVTGRRPRFFR
SGTAYYDEVAVEVAGVLGHRVAGFSVLGDAGATFSVEQVRRALLAATPGDVVILHMNHPESGTAAGVEAAIPLLRTRGLR
FVTLSEGMGD

Sequences:

>Translated_250_residues
MTAVEAGEGGDDGYAALRQRVVERFAGRAPTQWGERVAGVITHLRSGTNGVALTLDACGTARGKGIDSRLIAFLEREGVP
ATLFVTGRWIEANPGEFRRLAANPLFEIANHGDRHRPASVAGRSAYGIAGTADVAALVDEIELNARRIQEVTGRRPRFFR
SGTAYYDEVAVEVAGVLGHRVAGFSVLGDAGATFSVEQVRRALLAATPGDVVILHMNHPESGTAAGVEAAIPLLRTRGLR
FVTLSEGMGD
>Mature_249_residues
TAVEAGEGGDDGYAALRQRVVERFAGRAPTQWGERVAGVITHLRSGTNGVALTLDACGTARGKGIDSRLIAFLEREGVPA
TLFVTGRWIEANPGEFRRLAANPLFEIANHGDRHRPASVAGRSAYGIAGTADVAALVDEIELNARRIQEVTGRRPRFFRS
GTAYYDEVAVEVAGVLGHRVAGFSVLGDAGATFSVEQVRRALLAATPGDVVILHMNHPESGTAAGVEAAIPLLRTRGLRF
VTLSEGMGD

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26472; Mature: 26341

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVEAGEGGDDGYAALRQRVVERFAGRAPTQWGERVAGVITHLRSGTNGVALTLDACGT
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC
ARGKGIDSRLIAFLEREGVPATLFVTGRWIEANPGEFRRLAANPLFEIANHGDRHRPASV
CCCCCHHHHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHCHHHHHHCCCCCCCCHHH
AGRSAYGIAGTADVAALVDEIELNARRIQEVTGRRPRFFRSGTAYYDEVAVEVAGVLGHR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHH
VAGFSVLGDAGATFSVEQVRRALLAATPGDVVILHMNHPESGTAAGVEAAIPLLRTRGLR
HHCEEEECCCCCEEEHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCE
FVTLSEGMGD
EEEECCCCCC
>Mature Secondary Structure 
TAVEAGEGGDDGYAALRQRVVERFAGRAPTQWGERVAGVITHLRSGTNGVALTLDACGT
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC
ARGKGIDSRLIAFLEREGVPATLFVTGRWIEANPGEFRRLAANPLFEIANHGDRHRPASV
CCCCCHHHHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHCHHHHHHCCCCCCCCHHH
AGRSAYGIAGTADVAALVDEIELNARRIQEVTGRRPRFFRSGTAYYDEVAVEVAGVLGHR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHH
VAGFSVLGDAGATFSVEQVRRALLAATPGDVVILHMNHPESGTAAGVEAAIPLLRTRGLR
HHCEEEECCCCCEEEHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCE
FVTLSEGMGD
EEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA