Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

Click here to switch to the map view.

The map label for this gene is 39995470

Identifier: 39995470

GI number: 39995470

Start: 393987

End: 394442

Strand: Direct

Name: 39995470

Synonym: GSU0362

Alternate gene names: NA

Gene position: 393987-394442 (Clockwise)

Preceding gene: 39995468

Following gene: 39995474

Centisome position: 10.33

GC content: 56.8

Gene sequence:

>456_bases
ATGGCACAGGTGTTTGATTTTACGCGACTGCGCAGGCTGACGATTATTCACGTATTTGTTCAGGCCTTTCTGCTGATTCT
CCTTGTCGGCACCACTTCTGTGCTTCTCGGCAAGGTTCCGTCCCAGGTTTTCATGAACAGTGTCATCAGGGTCGTGGTGC
TCCAACTGATCCTTTTTTATCCCGTGTACAAGCTCGCGGCTTCGGATGCGGAGCGTGAGGTGGCATCGGCCGTCACGGGG
CTACCCGCCGAAGAGATGCAGGCCCTGCGCCGCAAGAGGGTATTCAGCGACATCCTCAAGGGCGCGCTGATCATCTTTTT
TTTCACGTTCATCCTGAGGGCTCCCGGCGCCCCCCAGATCCAGTTCTCCATCCTCGCCGTCTTCCTCCTCTCCTACCTGG
CCTACTTTCAGTGTTTCAACTCGGTCGCCAAGCGGCTCATGCGCGCCAAGAGCTGA

Upstream 100 bases:

>100_bases
TGCCTTCCATCTGCTCAACTGAGTTGTAAAACGATATTTTATTTGATAAGGTGTATACCACTTGCCGACAACGGCGATTA
CTTCACATCAAGGAGTTGTC

Downstream 100 bases:

>100_bases
GGTCAGCCGCGGCACTATGGGGATGGAGGGGCCGCGAAGAAGTCAGCCATGGCCCCGAAGACCTCCGCCGAAGAACCGGT
CACGAGCCGCACGGGCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MAQVFDFTRLRRLTIIHVFVQAFLLILLVGTTSVLLGKVPSQVFMNSVIRVVVLQLILFYPVYKLAASDAEREVASAVTG
LPAEEMQALRRKRVFSDILKGALIIFFFTFILRAPGAPQIQFSILAVFLLSYLAYFQCFNSVAKRLMRAKS

Sequences:

>Translated_151_residues
MAQVFDFTRLRRLTIIHVFVQAFLLILLVGTTSVLLGKVPSQVFMNSVIRVVVLQLILFYPVYKLAASDAEREVASAVTG
LPAEEMQALRRKRVFSDILKGALIIFFFTFILRAPGAPQIQFSILAVFLLSYLAYFQCFNSVAKRLMRAKS
>Mature_150_residues
AQVFDFTRLRRLTIIHVFVQAFLLILLVGTTSVLLGKVPSQVFMNSVIRVVVLQLILFYPVYKLAASDAEREVASAVTGL
PAEEMQALRRKRVFSDILKGALIIFFFTFILRAPGAPQIQFSILAVFLLSYLAYFQCFNSVAKRLMRAKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17051; Mature: 16920

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQVFDFTRLRRLTIIHVFVQAFLLILLVGTTSVLLGKVPSQVFMNSVIRVVVLQLILFY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
PVYKLAASDAEREVASAVTGLPAEEMQALRRKRVFSDILKGALIIFFFTFILRAPGAPQI
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
QFSILAVFLLSYLAYFQCFNSVAKRLMRAKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AQVFDFTRLRRLTIIHVFVQAFLLILLVGTTSVLLGKVPSQVFMNSVIRVVVLQLILFY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
PVYKLAASDAEREVASAVTGLPAEEMQALRRKRVFSDILKGALIIFFFTFILRAPGAPQI
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
QFSILAVFLLSYLAYFQCFNSVAKRLMRAKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA