| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995411
Identifier: 39995411
GI number: 39995411
Start: 331170
End: 333134
Strand: Direct
Name: 39995411
Synonym: GSU0302
Alternate gene names: NA
Gene position: 331170-333134 (Clockwise)
Preceding gene: 39995410
Following gene: 39995412
Centisome position: 8.68
GC content: 63.87
Gene sequence:
>1965_bases ATGCCCCATCGCCTCCACCTGGAACAGTTCGGCCCCGTCCATGCCCTCCCCGTTCTCCACTATCGCCTGGAGTTCGCACA TCTCGTCCGCGAGGCAGTGCGCCGCGTCAAGCCCGACTGCATCGCCATCGAGTTGCCGTCCACGATCGAGGCGCCGTTCC TGCGGGCAGTGGAGCGCCTGCCCGAGATATCGGTCATCCACTACGAAGGTCGGCAGCGCCGCGATGGCGCCGAATCGGTC TACCTCCTGGTGGAACCGGCCGATCCCCTGGTCGAAGGGGCGAGACTGGCCCTGGAGCGGCGGATTCCCCTGCGGCTCGT GGATGTGGACACCGACTCCTATCCCCGCCATGTGGAAGCGCTTCCCGACTCCTACGCCATTCACCGGATTGGCCTCACCC CCTACTATGAGGAGTACCGGCGTGCGGCCGCCTCTGTGGCGCCGGGCCGGGAGGATCGGCGGCGCGAGCGGGGAATGGCC TGGCGGCTCCAGGAACTGGCAAAAGAGCATGGCAGCATTCTCTTTGTCTGTGGCATGTACCATCTGGAGCGGATCAAGGA CGATTTCGGGCGGCCCCAGGCCGCTCCCCTGGAGAGGGTGCGGCGCCAGGGGGTGAGGCTGTTCAATCTGCATCCCGACT CCTGCCGGGAGATCCTCGACGAGTTTCCCTTTATTTCGGCGGTCCATGAACTGCGTCGTGGTCCTCTGCCGCCTGAACCC GACGATCGCGGCGAGACGCTCCGCAAGCGATTCAGTGCGTTCGAGCTAATTGTCGGCGGGAGGAAGGACCTCCCGGCGGA GGAGCTTTTGCGCCATGCGGTAGAGCGGGGTGCCCGGCATGCGGGGCGGGGGGAGGAGTTCCCCGACCGGCAGCGGATCA TCTTCCGGCTCTTCCAGGAGGCGGCCCGCCACTACCGGCAGGAGACGGGCGACCCGGTCCACCTCTGGCAGAAGCGGGCC TTTTTCCGTTTTGCCCGCAATTATGCCCTTGCCTCGGGCGCACTCCTGCCCGATCTGTTTCAGCTGCTCATGGCGGCACG GGGGTGTGTGGACGATAACTTCGCCTACGCCCTGTGGCGCCTTGCCACCTTCTACCACTGGCAGCGGGCCGAGGCAGACA TCCCGACCATCAGTATCTCTCCCGAGGAAATCTGGGGCGGGAGCCGCCGCATCCGTTTCCGCCCACGGGAGCGGCGCCGG AAAGGGCTGTCGCATTTGGGCTTTCTCAAGCGCAAGAAGGAAAAGCGCCCCGGAGAATGGCTCGAAGGATTCACTGACCC GAGCATCTGCTCCTATCCGCCCGAGGATGTGCTGATTGAGGAGTATGGCCGCTTTCTCAAGAAAAAAGGGGCCATGCAGC TTTCCGAGGAACTCTCCCGTACGGAGCCGTTCACCTCGTCACTTCTGGATGGGATCGATCTGCGGGAAACACTGCGCAAC GTTGCCGACGGGCGGGTCTATGTTCGGGAAAGCCAGCGAGCCAAGGGGGGCGTGGGCTCGGTGGTCGTCATCTTCGACGA AGACCGGGAAAACGGTAACTATCCCTACCGCACGACCTGGCTGGGCGAGCACGAGCAGGAATCAGACATGGCCTTCTATG CGACGCCGCCGGAGGACAACATCGTCGGTCCCGGCATCTGCCGCTGCGAGTACGGCGGGTTTCTTCTCTCCTACCCGCCG CGCCGGATGATGGATGTCTGGCGCGACCCGGACTATGTCTTTGCCCGGTCAAAGCCGGAGGTGCTTCTCCTGGCCGCTCT CGACTATTCGCCCGAAAAGCATGTGGTCCACGTGGCTGCCCGGCCACCCCGCAGCATCTTCCGGCAGATCGCCGCACGAA TGGGGAAAAAGATTGTCCACATCCCCTTGGGCTCCCTTTCGTCGGTAAAGCTCAAATCCATCCGGGTGCTTCATATCCTG CACGGTCACGACAAGCGTCAGGTGGCCAAGGACTACATCTGGTGA
Upstream 100 bases:
>100_bases GCTGATCCTCTTCTCCTGTTCGGCCCGTCGACACTGCAGCGACCCGGCACCCGTGCGTTTCTCTCTGGGGAGGGGCTGTG AGCGCAAGGACGAATACCCC
Downstream 100 bases:
>100_bases CATGTCCTTGCCCCTTCGGGGGGGCGGGGTATACTTGAGACAAAATCCGGCCGGAGGACCCGATGTCCTGGTTTGCCAAC CTGAAAATCACCCCAAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 654; Mature: 653
Protein sequence:
>654_residues MPHRLHLEQFGPVHALPVLHYRLEFAHLVREAVRRVKPDCIAIELPSTIEAPFLRAVERLPEISVIHYEGRQRRDGAESV YLLVEPADPLVEGARLALERRIPLRLVDVDTDSYPRHVEALPDSYAIHRIGLTPYYEEYRRAAASVAPGREDRRRERGMA WRLQELAKEHGSILFVCGMYHLERIKDDFGRPQAAPLERVRRQGVRLFNLHPDSCREILDEFPFISAVHELRRGPLPPEP DDRGETLRKRFSAFELIVGGRKDLPAEELLRHAVERGARHAGRGEEFPDRQRIIFRLFQEAARHYRQETGDPVHLWQKRA FFRFARNYALASGALLPDLFQLLMAARGCVDDNFAYALWRLATFYHWQRAEADIPTISISPEEIWGGSRRIRFRPRERRR KGLSHLGFLKRKKEKRPGEWLEGFTDPSICSYPPEDVLIEEYGRFLKKKGAMQLSEELSRTEPFTSSLLDGIDLRETLRN VADGRVYVRESQRAKGGVGSVVVIFDEDRENGNYPYRTTWLGEHEQESDMAFYATPPEDNIVGPGICRCEYGGFLLSYPP RRMMDVWRDPDYVFARSKPEVLLLAALDYSPEKHVVHVAARPPRSIFRQIAARMGKKIVHIPLGSLSSVKLKSIRVLHIL HGHDKRQVAKDYIW
Sequences:
>Translated_654_residues MPHRLHLEQFGPVHALPVLHYRLEFAHLVREAVRRVKPDCIAIELPSTIEAPFLRAVERLPEISVIHYEGRQRRDGAESV YLLVEPADPLVEGARLALERRIPLRLVDVDTDSYPRHVEALPDSYAIHRIGLTPYYEEYRRAAASVAPGREDRRRERGMA WRLQELAKEHGSILFVCGMYHLERIKDDFGRPQAAPLERVRRQGVRLFNLHPDSCREILDEFPFISAVHELRRGPLPPEP DDRGETLRKRFSAFELIVGGRKDLPAEELLRHAVERGARHAGRGEEFPDRQRIIFRLFQEAARHYRQETGDPVHLWQKRA FFRFARNYALASGALLPDLFQLLMAARGCVDDNFAYALWRLATFYHWQRAEADIPTISISPEEIWGGSRRIRFRPRERRR KGLSHLGFLKRKKEKRPGEWLEGFTDPSICSYPPEDVLIEEYGRFLKKKGAMQLSEELSRTEPFTSSLLDGIDLRETLRN VADGRVYVRESQRAKGGVGSVVVIFDEDRENGNYPYRTTWLGEHEQESDMAFYATPPEDNIVGPGICRCEYGGFLLSYPP RRMMDVWRDPDYVFARSKPEVLLLAALDYSPEKHVVHVAARPPRSIFRQIAARMGKKIVHIPLGSLSSVKLKSIRVLHIL HGHDKRQVAKDYIW >Mature_653_residues PHRLHLEQFGPVHALPVLHYRLEFAHLVREAVRRVKPDCIAIELPSTIEAPFLRAVERLPEISVIHYEGRQRRDGAESVY LLVEPADPLVEGARLALERRIPLRLVDVDTDSYPRHVEALPDSYAIHRIGLTPYYEEYRRAAASVAPGREDRRRERGMAW RLQELAKEHGSILFVCGMYHLERIKDDFGRPQAAPLERVRRQGVRLFNLHPDSCREILDEFPFISAVHELRRGPLPPEPD DRGETLRKRFSAFELIVGGRKDLPAEELLRHAVERGARHAGRGEEFPDRQRIIFRLFQEAARHYRQETGDPVHLWQKRAF FRFARNYALASGALLPDLFQLLMAARGCVDDNFAYALWRLATFYHWQRAEADIPTISISPEEIWGGSRRIRFRPRERRRK GLSHLGFLKRKKEKRPGEWLEGFTDPSICSYPPEDVLIEEYGRFLKKKGAMQLSEELSRTEPFTSSLLDGIDLRETLRNV ADGRVYVRESQRAKGGVGSVVVIFDEDRENGNYPYRTTWLGEHEQESDMAFYATPPEDNIVGPGICRCEYGGFLLSYPPR RMMDVWRDPDYVFARSKPEVLLLAALDYSPEKHVVHVAARPPRSIFRQIAARMGKKIVHIPLGSLSSVKLKSIRVLHILH GHDKRQVAKDYIW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75717; Mature: 75586
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHRLHLEQFGPVHALPVLHYRLEFAHLVREAVRRVKPDCIAIELPSTIEAPFLRAVERL CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHC PEISVIHYEGRQRRDGAESVYLLVEPADPLVEGARLALERRIPLRLVDVDTDSYPRHVEA CCEEEEEECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH LPDSYAIHRIGLTPYYEEYRRAAASVAPGREDRRRERGMAWRLQELAKEHGSILFVCGMY CCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCEEEEHHHH HLERIKDDFGRPQAAPLERVRRQGVRLFNLHPDSCREILDEFPFISAVHELRRGPLPPEP HHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHCCHHHHHHHHHCCCCCCCC DDRGETLRKRFSAFELIVGGRKDLPAEELLRHAVERGARHAGRGEEFPDRQRIIFRLFQE CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH AARHYRQETGDPVHLWQKRAFFRFARNYALASGALLPDLFQLLMAARGCVDDNFAYALWR HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHH LATFYHWQRAEADIPTISISPEEIWGGSRRIRFRPRERRRKGLSHLGFLKRKKEKRPGEW HHHHHHHHHCCCCCCEEECCHHHHCCCCCEEEECCHHHHHCCHHHHHHHHHHHHCCCCHH LEGFTDPSICSYPPEDVLIEEYGRFLKKKGAMQLSEELSRTEPFTSSLLDGIDLRETLRN HHCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHH VADGRVYVRESQRAKGGVGSVVVIFDEDRENGNYPYRTTWLGEHEQESDMAFYATPPEDN HHCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCC IVGPGICRCEYGGFLLSYPPRRMMDVWRDPDYVFARSKPEVLLLAALDYSPEKHVVHVAA CCCCCEEEEECCCEEECCCCHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCCEEEEEC RPPRSIFRQIAARMGKKIVHIPLGSLSSVKLKSIRVLHILHGHDKRQVAKDYIW CCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHEEEEHHHHCCCHHHHHHHCCC >Mature Secondary Structure PHRLHLEQFGPVHALPVLHYRLEFAHLVREAVRRVKPDCIAIELPSTIEAPFLRAVERL CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHC PEISVIHYEGRQRRDGAESVYLLVEPADPLVEGARLALERRIPLRLVDVDTDSYPRHVEA CCEEEEEECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH LPDSYAIHRIGLTPYYEEYRRAAASVAPGREDRRRERGMAWRLQELAKEHGSILFVCGMY CCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCEEEEHHHH HLERIKDDFGRPQAAPLERVRRQGVRLFNLHPDSCREILDEFPFISAVHELRRGPLPPEP HHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHCCHHHHHHHHHCCCCCCCC DDRGETLRKRFSAFELIVGGRKDLPAEELLRHAVERGARHAGRGEEFPDRQRIIFRLFQE CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH AARHYRQETGDPVHLWQKRAFFRFARNYALASGALLPDLFQLLMAARGCVDDNFAYALWR HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHH LATFYHWQRAEADIPTISISPEEIWGGSRRIRFRPRERRRKGLSHLGFLKRKKEKRPGEW HHHHHHHHHCCCCCCEEECCHHHHCCCCCEEEECCHHHHHCCHHHHHHHHHHHHCCCCHH LEGFTDPSICSYPPEDVLIEEYGRFLKKKGAMQLSEELSRTEPFTSSLLDGIDLRETLRN HHCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHH VADGRVYVRESQRAKGGVGSVVVIFDEDRENGNYPYRTTWLGEHEQESDMAFYATPPEDN HHCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCC IVGPGICRCEYGGFLLSYPPRRMMDVWRDPDYVFARSKPEVLLLAALDYSPEKHVVHVAA CCCCCEEEEECCCEEECCCCHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCCEEEEEC RPPRSIFRQIAARMGKKIVHIPLGSLSSVKLKSIRVLHILHGHDKRQVAKDYIW CCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHEEEEHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA