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The map label for this gene is yjbJ [H]

Identifier: 39995410

GI number: 39995410

Start: 330437

End: 331027

Strand: Direct

Name: yjbJ [H]

Synonym: GSU0301

Alternate gene names: 39995410

Gene position: 330437-331027 (Clockwise)

Preceding gene: 39995409

Following gene: 39995411

Centisome position: 8.66

GC content: 65.48

Gene sequence:

>591_bases
ATGCGCCTCGATATGATGCGAAGCGCCTTCTCCCTGGGAGATACCGCCGGCGAGACGCCCCGGCCCGTCGGGGCCCAGGC
CATGGAGTTCATCCTCAAGAGCTTCGCCCAGAACCGTGGCGAAGTGACCGGTGCTGATGCCGCGCAGGCAGAGGTCGGGG
CGCCGGCCGATGTGTCCGCCGCCGAGGTCTCGTCGACCGGCCCGCGCGATGCCGGCTGGCTCGAAGATGTCATCCAGCGG
GCCTCCCGCCGCTACGGGGTCGAGGTGGGGCTCATCAAGGCGGTCATCAAGGCCGAGAGCAACTTCAACCCCAACGCAGT
GTCCCATGCCGGAGCCCAGGGGCTCATGCAGCTCATGCCCGCCACCGCACGGGGCCTCGGGGTTACCGATTCGTTCGATC
CAGAACAGAACGTCATGGCCGGCACGCGTTTCCTCAAGGATCTGCTGAAGCGGTACGGAGGCGATATCGACAAGACCCTG
GCCGCATACAATTGGGGCCCCGGCAACGTCGACCGCAAGCCCCATCTGCTCCCTCGTGAGACACGCGACTACCTCGTCAA
GGTGAAGGAATACTACAGCCAGTTCGCCTGA

Upstream 100 bases:

>100_bases
GGCGGATACCTCGCGCTTTGAGGCCCTTCTTGCCGGGCGAGCCGCGTCACCGGGACGGAAAACCGACATTAGGGAGACCG
CTGCCGCGGCGGCCGAGCTC

Downstream 100 bases:

>100_bases
GCGTAGCGCTTCCACGCCGTAGCAACAGACCAGCGCTTTCCGGCTGATCCTCTTCTCCTGTTCGGCCCGTCGACACTGCA
GCGACCCGGCACCCGTGCGT

Product: lytic murein transglycosylase

Products: N-Acetylmuramic Acid Residues; N-Acetylglucosamine Residues [C]

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MRLDMMRSAFSLGDTAGETPRPVGAQAMEFILKSFAQNRGEVTGADAAQAEVGAPADVSAAEVSSTGPRDAGWLEDVIQR
ASRRYGVEVGLIKAVIKAESNFNPNAVSHAGAQGLMQLMPATARGLGVTDSFDPEQNVMAGTRFLKDLLKRYGGDIDKTL
AAYNWGPGNVDRKPHLLPRETRDYLVKVKEYYSQFA

Sequences:

>Translated_196_residues
MRLDMMRSAFSLGDTAGETPRPVGAQAMEFILKSFAQNRGEVTGADAAQAEVGAPADVSAAEVSSTGPRDAGWLEDVIQR
ASRRYGVEVGLIKAVIKAESNFNPNAVSHAGAQGLMQLMPATARGLGVTDSFDPEQNVMAGTRFLKDLLKRYGGDIDKTL
AAYNWGPGNVDRKPHLLPRETRDYLVKVKEYYSQFA
>Mature_196_residues
MRLDMMRSAFSLGDTAGETPRPVGAQAMEFILKSFAQNRGEVTGADAAQAEVGAPADVSAAEVSSTGPRDAGWLEDVIQR
ASRRYGVEVGLIKAVIKAESNFNPNAVSHAGAQGLMQLMPATARGLGVTDSFDPEQNVMAGTRFLKDLLKRYGGDIDKTL
AAYNWGPGNVDRKPHLLPRETRDYLVKVKEYYSQFA

Specific function: Murein-Degrading Enzyme. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division (By Similarity). [C]

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

Organism=Escherichia coli, GI87082191, Length=114, Percent_Identity=39.4736842105263, Blast_Score=68, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 21194; Mature: 21194

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS00922 TRANSGLYCOSYLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLDMMRSAFSLGDTAGETPRPVGAQAMEFILKSFAQNRGEVTGADAAQAEVGAPADVSA
CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCH
AEVSSTGPRDAGWLEDVIQRASRRYGVEVGLIKAVIKAESNFNPNAVSHAGAQGLMQLMP
HHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
ATARGLGVTDSFDPEQNVMAGTRFLKDLLKRYGGDIDKTLAAYNWGPGNVDRKPHLLPRE
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCHH
TRDYLVKVKEYYSQFA
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLDMMRSAFSLGDTAGETPRPVGAQAMEFILKSFAQNRGEVTGADAAQAEVGAPADVSA
CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCH
AEVSSTGPRDAGWLEDVIQRASRRYGVEVGLIKAVIKAESNFNPNAVSHAGAQGLMQLMP
HHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
ATARGLGVTDSFDPEQNVMAGTRFLKDLLKRYGGDIDKTLAAYNWGPGNVDRKPHLLPRE
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCHH
TRDYLVKVKEYYSQFA
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Muramic Acid [C]

Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]

General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]