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The map label for this gene is 39995412

Identifier: 39995412

GI number: 39995412

Start: 333197

End: 334414

Strand: Direct

Name: 39995412

Synonym: GSU0303

Alternate gene names: NA

Gene position: 333197-334414 (Clockwise)

Preceding gene: 39995411

Following gene: 39995414

Centisome position: 8.74

GC content: 59.11

Gene sequence:

>1218_bases
ATGTCCTGGTTTGCCAACCTGAAAATCACCCCAAAATTCATAGTTATTCTTTGTGTCCTGTTTGTAGCTCTCATGGGTGT
CAATGCCGTTGACGATTATCTGCGGCAGGAGTCGTTGATCGTCAAGGATGCCACCGATAATGCCCGTATCCTTGCCCGGC
AGATCGTTGAAACCCGGGAATATATGTCTTCGGTGGTCCGGGGCGAACCGGAGGCGAACTACAACCTCGTCCCCCAGGTG
GTCGCTACCCAGGTGGCCAAGCGGATCACGACCGGCAGCAAGTACTACGTCCGTCAGGTGTCGTTACGCTACCGCAATCC
CGCCAACCGCCCCGATGCCTATGAAACGGCGATGCTTCAGCGGTTCGGCAGGGAAAAGGCTGCCGAGCAGTGGGAGGTGG
TAACGATCGACGGCAAACGGGTCTTCCGCTATCTGCTGCCCATGACTGCCGACGCCTCATGTCTCGGTTGCCACGGCCGC
TACGAGGAGGCCCCGGCCTTCGTCCAGGCGCGGTTCCCCAAGGGGCACCCCTCCTATGATTACCAGATCGGCCAACTGAT
CGGCGCCGTGTCAGTTTCCATTCCCATGGCGGATCTCTATCGCCAGATCGGTATCAACCTCAAGCTCGATCTGGCAATCG
TCTCGGGCGTAGTCCTCCTCATCCTCGCGGCCATGAGCTTTATGGTCCACCGCTCCATTATCAAGCCGGTCCGGTCGGTG
GCAACCTCCATTGGCAACGTGGCCGCTACGGGGAATTTTTCGGAACGGCTCAGGAGAAGTTCCAACGACGAGGTGGGAGA
GCTGGTGGGAGCGTTCAACGAACTCATGGAGGAGTTGGATCGCACGACGCGTCAACGGCAGGAGTCTGAAGACCGCTACC
GCAACGTGCTGGAGATGGCCCAGTCCGCCATTGTCACCTTTTTGGCCGACGGGAAGCTCATCATTACCAACCGCAAGGCA
GAGGACCTGTTCGGCCTTCCCAAGGGAGAGCTGCTGGGTGTCTCCATCTACACCTTCATGGAGGAGGGGGATGCGGTAAA
GGGCGCCATCGAGACCTATCTGAGGGAAGGGGCGGCAGCCATGATCGGGGAGACGACCCCGCAGCGGATTCGCAGCATCC
GCGGGAATGTGACAACGGTGGAAATGGCCCTCTCGGTGTCCCGGTCGGACCACAACCCCCTCTTTACCGCTATTTTGCGA
GAAAACGGCCGGTCCTAG

Upstream 100 bases:

>100_bases
ACGACAAGCGTCAGGTGGCCAAGGACTACATCTGGTGACATGTCCTTGCCCCTTCGGGGGGGCGGGGTATACTTGAGACA
AAATCCGGCCGGAGGACCCG

Downstream 100 bases:

>100_bases
TCCCTGGCCAGCCCCTTGGTCACCACGTCGCGGATGTCTCTTGCCAGGGTGGGCTCCCGCGCTATCCGTTCCAGTTCTGT
CTTCATCCGTTCCCTCCGGT

Product: sensory box protein

Products: NA

Alternate protein names: Sensor With HAMP Domain Protein; PAS/PAC Sensor Protein; Diguanylate Cyclase/Phosphodiesterase; Two-Component Sensor Histidine Kinase; Sensor Histidine Kinase; Sensor Protein; Sensor With HAMP Domain; Methyl-Accepting Chemotaxis Protein; Chemotaxis Sensory Transducer; HAMP Domain Protein; Mcp-Domain Signal Transduction Protein; PasGgdef; Two-Component System Sensory/Regulatory Protein; PAS/PAC Sensor Hybrid Histidine Kinase; Metal Dependent Phosphohydrolase; Sensory Box Protein; HAMP Domain-Containing Protein; Signal Transduction Histidine Kinase; Sensor Histidine Kinase/Response Regulator; Methyl-Accepting Chemotaxis Sensory Transducer; Multi-Sensor Signal Transduction Histidine Kinase

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MSWFANLKITPKFIVILCVLFVALMGVNAVDDYLRQESLIVKDATDNARILARQIVETREYMSSVVRGEPEANYNLVPQV
VATQVAKRITTGSKYYVRQVSLRYRNPANRPDAYETAMLQRFGREKAAEQWEVVTIDGKRVFRYLLPMTADASCLGCHGR
YEEAPAFVQARFPKGHPSYDYQIGQLIGAVSVSIPMADLYRQIGINLKLDLAIVSGVVLLILAAMSFMVHRSIIKPVRSV
ATSIGNVAATGNFSERLRRSSNDEVGELVGAFNELMEELDRTTRQRQESEDRYRNVLEMAQSAIVTFLADGKLIITNRKA
EDLFGLPKGELLGVSIYTFMEEGDAVKGAIETYLREGAAAMIGETTPQRIRSIRGNVTTVEMALSVSRSDHNPLFTAILR
ENGRS

Sequences:

>Translated_405_residues
MSWFANLKITPKFIVILCVLFVALMGVNAVDDYLRQESLIVKDATDNARILARQIVETREYMSSVVRGEPEANYNLVPQV
VATQVAKRITTGSKYYVRQVSLRYRNPANRPDAYETAMLQRFGREKAAEQWEVVTIDGKRVFRYLLPMTADASCLGCHGR
YEEAPAFVQARFPKGHPSYDYQIGQLIGAVSVSIPMADLYRQIGINLKLDLAIVSGVVLLILAAMSFMVHRSIIKPVRSV
ATSIGNVAATGNFSERLRRSSNDEVGELVGAFNELMEELDRTTRQRQESEDRYRNVLEMAQSAIVTFLADGKLIITNRKA
EDLFGLPKGELLGVSIYTFMEEGDAVKGAIETYLREGAAAMIGETTPQRIRSIRGNVTTVEMALSVSRSDHNPLFTAILR
ENGRS
>Mature_404_residues
SWFANLKITPKFIVILCVLFVALMGVNAVDDYLRQESLIVKDATDNARILARQIVETREYMSSVVRGEPEANYNLVPQVV
ATQVAKRITTGSKYYVRQVSLRYRNPANRPDAYETAMLQRFGREKAAEQWEVVTIDGKRVFRYLLPMTADASCLGCHGRY
EEAPAFVQARFPKGHPSYDYQIGQLIGAVSVSIPMADLYRQIGINLKLDLAIVSGVVLLILAAMSFMVHRSIIKPVRSVA
TSIGNVAATGNFSERLRRSSNDEVGELVGAFNELMEELDRTTRQRQESEDRYRNVLEMAQSAIVTFLADGKLIITNRKAE
DLFGLPKGELLGVSIYTFMEEGDAVKGAIETYLREGAAAMIGETTPQRIRSIRGNVTTVEMALSVSRSDHNPLFTAILRE
NGRS

Specific function: Unknown

COG id: COG2770

COG function: function code T; FOG: HAMP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45187; Mature: 45055

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS50885 HAMP ; PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWFANLKITPKFIVILCVLFVALMGVNAVDDYLRQESLIVKDATDNARILARQIVETRE
CCCEECCEECHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHH
YMSSVVRGEPEANYNLVPQVVATQVAKRITTGSKYYVRQVSLRYRNPANRPDAYETAMLQ
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH
RFGREKAAEQWEVVTIDGKRVFRYLLPMTADASCLGCHGRYEEAPAFVQARFPKGHPSYD
HHHHHHHHCCCEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
YQIGQLIGAVSVSIPMADLYRQIGINLKLDLAIVSGVVLLILAAMSFMVHRSIIKPVRSV
HHHHHHHHHHHHCCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATSIGNVAATGNFSERLRRSSNDEVGELVGAFNELMEELDRTTRQRQESEDRYRNVLEMA
HHHHCCEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSAIVTFLADGKLIITNRKAEDLFGLPKGELLGVSIYTFMEEGDAVKGAIETYLREGAAA
HHHHHHHHCCCEEEEECCCHHHHCCCCCCCEEEEHHHHHHHCCCHHHHHHHHHHHCCHHH
MIGETTPQRIRSIRGNVTTVEMALSVSRSDHNPLFTAILRENGRS
HHCCCCHHHHHHHCCCCEEEEHHHHHCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
SWFANLKITPKFIVILCVLFVALMGVNAVDDYLRQESLIVKDATDNARILARQIVETRE
CCEECCEECHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHH
YMSSVVRGEPEANYNLVPQVVATQVAKRITTGSKYYVRQVSLRYRNPANRPDAYETAMLQ
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH
RFGREKAAEQWEVVTIDGKRVFRYLLPMTADASCLGCHGRYEEAPAFVQARFPKGHPSYD
HHHHHHHHCCCEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
YQIGQLIGAVSVSIPMADLYRQIGINLKLDLAIVSGVVLLILAAMSFMVHRSIIKPVRSV
HHHHHHHHHHHHCCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATSIGNVAATGNFSERLRRSSNDEVGELVGAFNELMEELDRTTRQRQESEDRYRNVLEMA
HHHHCCEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSAIVTFLADGKLIITNRKAEDLFGLPKGELLGVSIYTFMEEGDAVKGAIETYLREGAAA
HHHHHHHHCCCEEEEECCCHHHHCCCCCCCEEEEHHHHHHHCCCHHHHHHHHHHHCCHHH
MIGETTPQRIRSIRGNVTTVEMALSVSRSDHNPLFTAILRENGRS
HHCCCCHHHHHHHCCCCEEEEHHHHHCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA