Click here to switch to the map view.

The map label for this gene is recA [H]

Identifier: 39995256

GI number: 39995256

Start: 161049

End: 162065

Strand: Direct

Name: recA [H]

Synonym: GSU0145

Alternate gene names: 39995256

Gene position: 161049-162065 (Clockwise)

Preceding gene: 39995255

Following gene: 39995257

Centisome position: 4.22

GC content: 62.93

Gene sequence:

>1017_bases
GTGACCCAAGAACGCGAAAAGGCGATAGAGCTTGCGCTCAGCCAGATAGAAAAGCAGTTCGGCAAGGGGGCGATCATGCG
CCTCGGGGCGGATGAGGCCCTCCCCGATGTGGCCGCCATCCCCACCGGTTCCCTCTCCCTCGACCTGGCCCTCGGCGTCG
GCGGCGTCCCCCGCGGGCGGATTATCGAGATCTACGGACCCGAGTCGTCGGGCAAGACGACGCTCGCCCTGCACATCGCG
GCCGAGGCCCAGAAAATGGGCGGCATCGCTGCCTTCGTCGACGCCGAGCACGCGCTCGATATCGGCTATGCCCGCAAACT
CGGCGTCAAGACGGACGACCTGCTCGTCTCCCAGCCCGACACCGGGGAGCAAGCCTTGGAAATTGCCGAGATGCTCGTCA
GAAGCGGCGCTGTGGACGTCCTCGTCATCGACTCGGTGGCGGCACTGGTTCCCAAGGCCGAGATCGAAGGGGAGATGGGC
GACTCCCACATGGGGCTCCAGGCCCGGCTCATGTCTCAGGCCCTGCGCAAGCTCACCGGCATAATCTCCAAGTCCAACTG
CTGCGTCATCTTCATCAACCAGATCCGGATGAAGATCGGCGTCATGTTCGGCAACCCCGAAACCACCACCGGCGGCAACG
CCCTCAAGTTTTACGCCTCGGTACGTCTCGATATCCGCAAGATCGCATCCCTCAAGCAAGGGCAGGACGTCATCGGCTCC
CGCACCAAGGTGAAGGTGGTCAAGAACAAGGTGGCTCCCCCCTTCAAAGAGGTGGAGTTCGACATTTACTACGGTGAGGG
CATTTCCCGCGAGGGCGACATCCTCGACCTGGCCGTGGAGAAGGGGATCGTGGACAAGAGCGGCGCCTGGTTCTCCTACG
GCGGAGACCGGATTGGCCAGGGGCGCGAAAATTCCCGCCTTTTCCTCAAGGAGCGGCCAGAACTGGTGAACGAGATCGAA
GGGAAGGTTTACGACGTGGCCGGCATTCCCCGCAAAGGGGCGAAGGAAGCGGCATAG

Upstream 100 bases:

>100_bases
AGATACCCTTGAAAAGACCGAAAGATCTGTGTTATTTCTGATCAACTGACCGATACGAAACGTGGCGCCGGCCGCCGTCG
GCACCGCCCAGGAGGCGATT

Downstream 100 bases:

>100_bases
CCCATGGAACTGAACGATATCCTCACCGTCGCGGTTCGCGCCAAGGCGTCCGACGTCCACATCAAAACGGGCCTCCCGCC
CGTCGTGCGGATCGACGGCC

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MTQEREKAIELALSQIEKQFGKGAIMRLGADEALPDVAAIPTGSLSLDLALGVGGVPRGRIIEIYGPESSGKTTLALHIA
AEAQKMGGIAAFVDAEHALDIGYARKLGVKTDDLLVSQPDTGEQALEIAEMLVRSGAVDVLVIDSVAALVPKAEIEGEMG
DSHMGLQARLMSQALRKLTGIISKSNCCVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRKIASLKQGQDVIGS
RTKVKVVKNKVAPPFKEVEFDIYYGEGISREGDILDLAVEKGIVDKSGAWFSYGGDRIGQGRENSRLFLKERPELVNEIE
GKVYDVAGIPRKGAKEAA

Sequences:

>Translated_338_residues
MTQEREKAIELALSQIEKQFGKGAIMRLGADEALPDVAAIPTGSLSLDLALGVGGVPRGRIIEIYGPESSGKTTLALHIA
AEAQKMGGIAAFVDAEHALDIGYARKLGVKTDDLLVSQPDTGEQALEIAEMLVRSGAVDVLVIDSVAALVPKAEIEGEMG
DSHMGLQARLMSQALRKLTGIISKSNCCVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRKIASLKQGQDVIGS
RTKVKVVKNKVAPPFKEVEFDIYYGEGISREGDILDLAVEKGIVDKSGAWFSYGGDRIGQGRENSRLFLKERPELVNEIE
GKVYDVAGIPRKGAKEAA
>Mature_337_residues
TQEREKAIELALSQIEKQFGKGAIMRLGADEALPDVAAIPTGSLSLDLALGVGGVPRGRIIEIYGPESSGKTTLALHIAA
EAQKMGGIAAFVDAEHALDIGYARKLGVKTDDLLVSQPDTGEQALEIAEMLVRSGAVDVLVIDSVAALVPKAEIEGEMGD
SHMGLQARLMSQALRKLTGIISKSNCCVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRKIASLKQGQDVIGSR
TKVKVVKNKVAPPFKEVEFDIYYGEGISREGDILDLAVEKGIVDKSGAWFSYGGDRIGQGRENSRLFLKERPELVNEIEG
KVYDVAGIPRKGAKEAA

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=324, Percent_Identity=66.9753086419753, Blast_Score=451, Evalue=1e-128,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 36239; Mature: 36108

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQEREKAIELALSQIEKQFGKGAIMRLGADEALPDVAAIPTGSLSLDLALGVGGVPRGR
CCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
IIEIYGPESSGKTTLALHIAAEAQKMGGIAAFVDAEHALDIGYARKLGVKTDDLLVSQPD
EEEEECCCCCCCEEEEEEEEEHHHHHCCEEEEECCHHHHCCCHHHHCCCCCCCEEEECCC
TGEQALEIAEMLVRSGAVDVLVIDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLTG
CCHHHHHHHHHHHHCCCEEEEEECHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHH
IISKSNCCVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRKIASLKQGQDVIGS
HHCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCHHHHCC
RTKVKVVKNKVAPPFKEVEFDIYYGEGISREGDILDLAVEKGIVDKSGAWFSYGGDRIGQ
CEEEEEEHHCCCCCHHHEEEEEEECCCCCCCCCEEEEEHHCCCCCCCCCEEECCCCCCCC
GRENSRLFLKERPELVNEIEGKVYDVAGIPRKGAKEAA
CCCCCEEEECCCHHHHHHHCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure 
TQEREKAIELALSQIEKQFGKGAIMRLGADEALPDVAAIPTGSLSLDLALGVGGVPRGR
CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
IIEIYGPESSGKTTLALHIAAEAQKMGGIAAFVDAEHALDIGYARKLGVKTDDLLVSQPD
EEEEECCCCCCCEEEEEEEEEHHHHHCCEEEEECCHHHHCCCHHHHCCCCCCCEEEECCC
TGEQALEIAEMLVRSGAVDVLVIDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLTG
CCHHHHHHHHHHHHCCCEEEEEECHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHH
IISKSNCCVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRKIASLKQGQDVIGS
HHCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCHHHHCC
RTKVKVVKNKVAPPFKEVEFDIYYGEGISREGDILDLAVEKGIVDKSGAWFSYGGDRIGQ
CEEEEEEHHCCCCCHHHEEEEEEECCCCCCCCCEEEEEHHCCCCCCCCCEEECCCCCCCC
GRENSRLFLKERPELVNEIEGKVYDVAGIPRKGAKEAA
CCCCCEEEECCCHHHHHHHCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA