| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is bcp [C]
Identifier: 39995177
GI number: 39995177
Start: 82566
End: 83273
Strand: Direct
Name: bcp [C]
Synonym: GSU0066
Alternate gene names: 39995177
Gene position: 82566-83273 (Clockwise)
Preceding gene: 39995176
Following gene: 39995178
Centisome position: 2.16
GC content: 59.04
Gene sequence:
>708_bases GTGGCCATTGATGAGCAAAAACCCGTCTACGAACTACAGAAGGAGCTCGACGCTCTGAGAGAGGACTACCTTGCCGGTAT GTCCCCCGAGCATGCGGCAACGCTGCAACGCACCGCTACCGAACTGGTACTGTCGGGGATAGTCGGACATGCTGCAACGA TTGGCGATCGGGCGCAGGACTTCACCCTGCCCAATGCAGTGGGCAGGCAAATCCGGCTTTCCGAGGTCACGGCCCAGTCA ACGGCAGTGGTGACGTTTTATCGGGGTGCATGGTGACCATACTGCAGCCTGCAGTTGCGGGCGTATCAGGCGGTGTTGCC ACGGCTTCGGGAGCTGGGGGGCGAACTCTTGGCCATTTCACCCCAGACCCCGGACAAGTCGCAGGCGACGTTACTCAAGA ACTTTTTGCAGTATGAGGTGTTGAGTGACGTGGGGAATCTGGTCGCCCGCAGCTTTGGCCTCGTGTATCCGCTGGGAGAG GAAATGCGTCGCATCTATCTCGGGTTCGGGGTAAATCTTGCGGACTACAACGGCGACGAATCCTGGGAGTTGCCGCTTCC CGGCACGTTCGTCATTGATGGCACGATGACCATCCGGTATTCATTCGTGGATGCCGATTACACCCGGCGCCTCGAGCCGG CGACGATACTAGACGTGTTGGAGCGGATCCGCGAGGAGAGGGGGCGTGATGATAACCAGGCTTCTTGA
Upstream 100 bases:
>100_bases TAGAGAACAACCTGCACCGGGCTGCCTGAACGTGCAGTATGGGGACCGGTGCCCGCCTTGAGCGGGTTCCGGTCTTTTTG TCTCCAGAGAGGAGGTTGTG
Downstream 100 bases:
>100_bases GGGGAACCGGCGTTTTGTGGCGGAGGTCTTTGAAAAGGAGCGCGAGACCTTTGCGACCCTTGCCCGGGGGCAGCGTCCGA CAGTTCTCTGGATCGGTTGC
Product: AhpC/Tsa
Products: Acceptor; H2O; oxidized thioredoxin [C]
Alternate protein names: Redoxin; AhpC/Tsa Family Protein; Peroxiredoxin; Peroxiredoxin-Like Protein; Redoxin Superfamily; AhpC-TSA; Peroxiredoxin/AhpC/Tsa Family Protein; Antioxidant AhpC/TSA Family; AhpC/Tsa Family Protein Selenocysteine-Containing; Peroxiredoxin Thioredoxin-Like Fold Protein; Alkyl Hydroperoxide Reductase; Peroxiredoxin Family Protein; Helix-Turn-Helix Fis-Type; Antioxidant AhpC/TSA Family Protein
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MAIDEQKPVYELQKELDALREDYLAGMSPEHAATLQRTATELVLSGIVGHAATIGDRAQDFTLPNAVGRQIRLSEVTAQS TAVVTFYRGAWUPYCSLQLRAYQAVLPRLRELGGELLAISPQTPDKSQATLLKNFLQYEVLSDVGNLVARSFGLVYPLGE EMRRIYLGFGVNLADYNGDESWELPLPGTFVIDGTMTIRYSFVDADYTRRLEPATILDVLERIREERGRDDNQAS
Sequences:
>Translated_235_residues MAIDEQKPVYELQKELDALREDYLAGMSPEHAATLQRTATELVLSGIVGHAATIGDRAQDFTLPNAVGRQIRLSEVTAQS TAVVTFYRGAW*PYCSLQLRAYQAVLPRLRELGGELLAISPQTPDKSQATLLKNFLQYEVLSDVGNLVARSFGLVYPLGE EMRRIYLGFGVNLADYNGDESWELPLPGTFVIDGTMTIRYSFVDADYTRRLEPATILDVLERIREERGRDDNQAS >Mature_234_residues AIDEQKPVYELQKELDALREDYLAGMSPEHAATLQRTATELVLSGIVGHAATIGDRAQDFTLPNAVGRQIRLSEVTAQST AVVTFYRGAW*PYCSLQLRAYQAVLPRLRELGGELLAISPQTPDKSQATLLKNFLQYEVLSDVGNLVARSFGLVYPLGEE MRRIYLGFGVNLADYNGDESWELPLPGTFVIDGTMTIRYSFVDADYTRRLEPATILDVLERIREERGRDDNQAS
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26129; Mature: 25998
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIDEQKPVYELQKELDALREDYLAGMSPEHAATLQRTATELVLSGIVGHAATIGDRAQD CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH FTLPNAVGRQIRLSEVTAQSTAVVTFYRGAWPYCSLQLRAYQAVLPRLRELGGELLAISP CCCCHHHCCEEEHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECC QTPDKSQATLLKNFLQYEVLSDVGNLVARSFGLVYPLGEEMRRIYLGFGVNLADYNGDES CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCC WELPLPGTFVIDGTMTIRYSFVDADYTRRLEPATILDVLERIREERGRDDNQAS CCCCCCCEEEEECEEEEEEEEECCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AIDEQKPVYELQKELDALREDYLAGMSPEHAATLQRTATELVLSGIVGHAATIGDRAQD CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH FTLPNAVGRQIRLSEVTAQSTAVVTFYRGAWPYCSLQLRAYQAVLPRLRELGGELLAISP CCCCHHHCCEEEHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECC QTPDKSQATLLKNFLQYEVLSDVGNLVARSFGLVYPLGEEMRRIYLGFGVNLADYNGDES CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCC WELPLPGTFVIDGTMTIRYSFVDADYTRRLEPATILDVLERIREERGRDDNQAS CCCCCCCEEEEECEEEEEEEEECCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: reduced acceptor; H2O2; reduced thioredoxin [C]
Specific reaction: reduced acceptor + H2O2 = Acceptor + H2O reduced thioredoxin + H2O2 = oxidized thioredoxin + H2O [C]
General reaction: Oxidoreductases; Acting on a peroxide as acceptor; Peroxidase [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA