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The map label for this gene is cynR [C]

Identifier: 38638067

GI number: 38638067

Start: 426155

End: 426319

Strand: Direct

Name: cynR [C]

Synonym: PHG406

Alternate gene names: 38638067

Gene position: 426155-426319 (Clockwise)

Preceding gene: 38638062

Following gene: 38638068

Centisome position: 94.25

GC content: 61.21

Gene sequence:

>165_bases
GTGACGCGGGCGGCTTCGATCTTGCATATGGCCCAGCCGCCGTTGTCCCGCCAGATCCGGCAGTTCGAGGATGAAATCGG
CGTGGATCTTTTTCACCGCGTCGGTCGCGGAATGCGACTGTTGCAGATCGCCAATACCCCCAGCGGTAGCCGCTATATCC
GCTAG

Upstream 100 bases:

>100_bases
GACCATTCGTGTCTGATAGCATACCGTACAGGTATTTCTGGGGTCCGATATGGAGCTTCGCCACTTACGCTATTTCCAGA
CCGTCGCTCAGGAGTTAAAT

Downstream 100 bases:

>100_bases
CATTCACCTCGATCCAACTGATTGATCCGTAATGGATCTCTCGTCCGTTGTGACGTCTACATTGTTGCTGGTAGGCAACG
CGTTTTGGGGCGTTGGGTCC

Product: putative regulatory protein

Products: NA

Alternate protein names: LysR Family Transcriptional Regulator

Number of amino acids: Translated: 54; Mature: 53

Protein sequence:

>54_residues
MTRAASILHMAQPPLSRQIRQFEDEIGVDLFHRVGRGMRLLQIANTPSGSRYIR

Sequences:

>Translated_54_residues
MTRAASILHMAQPPLSRQIRQFEDEIGVDLFHRVGRGMRLLQIANTPSGSRYIR
>Mature_53_residues
TRAASILHMAQPPLSRQIRQFEDEIGVDLFHRVGRGMRLLQIANTPSGSRYIR

Specific function: Positive Regulatory Protein For The Cyn Operon. [C]

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6192; Mature: 6061

Theoretical pI: Translated: 12.03; Mature: 12.03

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRAASILHMAQPPLSRQIRQFEDEIGVDLFHRVGRGMRLLQIANTPSGSRYIR
CCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
TRAASILHMAQPPLSRQIRQFEDEIGVDLFHRVGRGMRLLQIANTPSGSRYIR
CCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA