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The map label for this gene is hypC2 [H]

Identifier: 38637738

GI number: 38637738

Start: 69334

End: 69621

Strand: Direct

Name: hypC2 [H]

Synonym: PHG073

Alternate gene names: 38637738

Gene position: 69334-69621 (Clockwise)

Preceding gene: 38637737

Following gene: 38637739

Centisome position: 15.33

GC content: 67.36

Gene sequence:

>288_bases
ATGTGCCTAGGTATCCCCGGACAGATCCTGGAAGTGCGCGACGCCGCCAATGCCTTGGCGATGGTCGAGGTCGGCGGCGT
GCGGCGCCTGATCAATATCGCCTTCATCGTGGACGACGACCACAAGGCCGAGGCTTGTGTGGGTGAATGGGTGCTGGTCC
ACGTGGGCTTTGCCATGAGCCGCCTGGACGAGGCGGAGGCGGCGCGCACGCTGGCGCTGCTGCATGAGCTCGGGATTGCG
CAGGCCGAGTTCGACGAGATGCGCGCGGGGTCGCCGGCCCCGCCATAG

Upstream 100 bases:

>100_bases
ACGGCGGCCTCTCGTTCGGGCAGGCGGCCATCGCCGCCGCGCGGTCCCTGGGAGGCGCAGACGTTGCAGGCCAGGCAAAC
GCGGGCTATCGGAGTACAAC

Downstream 100 bases:

>100_bases
CGGGCGGGGGCAGGAGAACAGGGCGGGAGCAAGGCTGGGACGGCAGGAATCACGTAGCAAGGAGACGCGGCATGCCCGGG
GAAACACCACTGCAAGGGCT

Product: HypC2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MCLGIPGQILEVRDAANALAMVEVGGVRRLINIAFIVDDDHKAEACVGEWVLVHVGFAMSRLDEAEAARTLALLHELGIA
QAEFDEMRAGSPAPP

Sequences:

>Translated_95_residues
MCLGIPGQILEVRDAANALAMVEVGGVRRLINIAFIVDDDHKAEACVGEWVLVHVGFAMSRLDEAEAARTLALLHELGIA
QAEFDEMRAGSPAPP
>Mature_95_residues
MCLGIPGQILEVRDAANALAMVEVGGVRRLINIAFIVDDDHKAEACVGEWVLVHVGFAMSRLDEAEAARTLALLHELGIA
QAEFDEMRAGSPAPP

Specific function: May Have A Specific Role In The Maturation Of The Large Subunits Of Hyd1 And Hyd2. [C]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

Organism=Escherichia coli, GI1789364, Length=77, Percent_Identity=49.3506493506493, Blast_Score=72, Evalue=5e-15,
Organism=Escherichia coli, GI1789083, Length=77, Percent_Identity=44.1558441558442, Blast_Score=66, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 10151; Mature: 10151

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS01097 HUPF_HYPC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLGIPGQILEVRDAANALAMVEVGGVRRLINIAFIVDDDHKAEACVGEWVLVHVGFAMS
CCCCCCCHHHHHHHHCCHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
RLDEAEAARTLALLHELGIAQAEFDEMRAGSPAPP
HHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MCLGIPGQILEVRDAANALAMVEVGGVRRLINIAFIVDDDHKAEACVGEWVLVHVGFAMS
CCCCCCCHHHHHHHHCCHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
RLDEAEAARTLALLHELGIAQAEFDEMRAGSPAPP
HHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8497190 [H]