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The map label for this gene is glpQ1 [H]

Identifier: 38234790

GI number: 38234790

Start: 2346584

End: 2347267

Strand: Reverse

Name: glpQ1 [H]

Synonym: DIP2254

Alternate gene names: 38234790

Gene position: 2347267-2346584 (Counterclockwise)

Preceding gene: 38234791

Following gene: 38234789

Centisome position: 94.32

GC content: 58.63

Gene sequence:

>684_bases
ATGGAGATCATTGCACACCGCGGATTTCGGGGCCGTTACCCAGAAATGACAGCACAGGCATACGAAAAAGCCTGCGAACT
GCCCATTCATGGGGTGGAATGCGACGTCCGACTCACCGCCGACGGTCACCTCGCCTGCGTCCACGACCGCACCCTGCTGC
GCATAGCAAGCTGCGGACTTGTCGTCTCAACCGCAACAATGGACCAGCTCAGAGAACACGGGATAATCACCCTCGACGAG
CTCATCGACATCCTCCCCGAGGACAAACATCTCTATATAGAAACAAAACACCCCATGCGCTACGGAGTCATGGCCGAAGA
ACAAGTCGCACTACGCCTGCGCTATCGCGGCCTACTCCACGACCCCCGATTCCACCTCATCTCCTTCTCCCACGCAGCCA
TCCGACGCATGGGGCGTATCGCGCCAGGCTTTGACACCATCTACCTGCGCAGAGAATGGGAACTACGCTACAACCCCAAA
GACTTTGCCATCTCCCGACCATCCGCGTGGGGACTTTCCCTAGCCCATGCGAAGATACGCCCCCAGCTCATCGGCCGCGA
CGGCAAAAAGACCTACATGTGGACGGTTAATGATGCCGACGATGTGCGCTGGGCACGCGACAACGGGGTGCAGTTGCTGG
CCACGGATTACCCGGATGTAGCTCTTGAGGCGCTCGCCCAATAG

Upstream 100 bases:

>100_bases
ACGTCCGCGGCGTTTCCGCAGGTCGGAGATATTAGAAAAGATTTAATTTGGCACGAACTACTCACTTTATGTTTTTCGCC
CACGGAGTAGTCTCAAAAAT

Downstream 100 bases:

>100_bases
ACTTATCCGTTATGGCTAAGAAAAAGAAGAAGGAACAGCTGCCTGAGGGCATGAGCCGCAGGCAGGCTAAGTTGGCGGCT
CGTGCCGCCGAGCGCGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase 1 [H]

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MEIIAHRGFRGRYPEMTAQAYEKACELPIHGVECDVRLTADGHLACVHDRTLLRIASCGLVVSTATMDQLREHGIITLDE
LIDILPEDKHLYIETKHPMRYGVMAEEQVALRLRYRGLLHDPRFHLISFSHAAIRRMGRIAPGFDTIYLRREWELRYNPK
DFAISRPSAWGLSLAHAKIRPQLIGRDGKKTYMWTVNDADDVRWARDNGVQLLATDYPDVALEALAQ

Sequences:

>Translated_227_residues
MEIIAHRGFRGRYPEMTAQAYEKACELPIHGVECDVRLTADGHLACVHDRTLLRIASCGLVVSTATMDQLREHGIITLDE
LIDILPEDKHLYIETKHPMRYGVMAEEQVALRLRYRGLLHDPRFHLISFSHAAIRRMGRIAPGFDTIYLRREWELRYNPK
DFAISRPSAWGLSLAHAKIRPQLIGRDGKKTYMWTVNDADDVRWARDNGVQLLATDYPDVALEALAQ
>Mature_227_residues
MEIIAHRGFRGRYPEMTAQAYEKACELPIHGVECDVRLTADGHLACVHDRTLLRIASCGLVVSTATMDQLREHGIITLDE
LIDILPEDKHLYIETKHPMRYGVMAEEQVALRLRYRGLLHDPRFHLISFSHAAIRRMGRIAPGFDTIYLRREWELRYNPK
DFAISRPSAWGLSLAHAKIRPQLIGRDGKKTYMWTVNDADDVRWARDNGVQLLATDYPDVALEALAQ

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 26028; Mature: 26028

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIIAHRGFRGRYPEMTAQAYEKACELPIHGVECDVRLTADGHLACVHDRTLLRIASCGL
CCEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCEEEHHHCCE
VVSTATMDQLREHGIITLDELIDILPEDKHLYIETKHPMRYGVMAEEQVALRLRYRGLLH
EEEHHHHHHHHHCCCEEHHHHHHHCCCCCEEEEEECCCEEECCCCHHHHHHHHHHCCCCC
DPRFHLISFSHAAIRRMGRIAPGFDTIYLRREWELRYNPKDFAISRPSAWGLSLAHAKIR
CCCEEEEEECHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCEEEECCCCCCEEEHHHCCC
PQLIGRDGKKTYMWTVNDADDVRWARDNGVQLLATDYPDVALEALAQ
HHEECCCCCEEEEEEECCCCCCEEECCCCEEEEEECCCHHHHHHHCC
>Mature Secondary Structure
MEIIAHRGFRGRYPEMTAQAYEKACELPIHGVECDVRLTADGHLACVHDRTLLRIASCGL
CCEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCEEEHHHCCE
VVSTATMDQLREHGIITLDELIDILPEDKHLYIETKHPMRYGVMAEEQVALRLRYRGLLH
EEEHHHHHHHHHCCCEEHHHHHHHCCCCCEEEEEECCCEEECCCCHHHHHHHHHHCCCCC
DPRFHLISFSHAAIRRMGRIAPGFDTIYLRREWELRYNPKDFAISRPSAWGLSLAHAKIR
CCCEEEEEECHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCEEEECCCCCCEEEHHHCCC
PQLIGRDGKKTYMWTVNDADDVRWARDNGVQLLATDYPDVALEALAQ
HHEECCCCCEEEEEEECCCCCCEEECCCCEEEEEECCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]