| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234789
Identifier: 38234789
GI number: 38234789
Start: 2345667
End: 2346533
Strand: Reverse
Name: 38234789
Synonym: DIP2253
Alternate gene names: NA
Gene position: 2346533-2345667 (Counterclockwise)
Preceding gene: 38234790
Following gene: 38234787
Centisome position: 94.29
GC content: 60.21
Gene sequence:
>867_bases ATGAGCCGCAGGCAGGCTAAGTTGGCGGCTCGTGCCGCCGAGCGCGCTGCTTTTGAACGCGACCCCCGCCCTTATGGCGG TTTCTCCTTTGAAACCGACCTCGTGGCAGTGCAGGAATTTGTCCCCTCTGCTATCGCAAAGATCGAGGTCGAAGGCCTGG ATAACGTCTATTTGTGCACCGTGCTGCCAGGTGGCTCCGCAGCGCTTGTGCGTGAAGAGTCCGCCGGCGGCGAAGTGTTC GTCGCATTGCAGACCCAGGCTCGCTCTCAAAACCCGAACCGCGACCTCGCATATGCCCTGAACTGGGCAAAGACCGCTAA GCCTGGCGACATCCTAGAAAAGGGTCTTGCAGATGGCACCGAGCCAAAGCTTGCGGAACTGCTCAAGGACCAAACCCTTA AGATCACCGAGTACTCCAACTTTGATTGGTGGCTCCCAGAGGGCACGACCGTGAACCCCATGCAGGCCCAGGCTATCCAA GCTGCTAACGATTCCGTCTTGCCTTCCGCGCGTGTCGACGCCCCCGTCCCCGGCACCGTCTGGTGGATCAACCCAGGCGA GAAGGCACATATTCGTTGGGTCCGTGCCGAAGCTGAGGATGCACTGCTGCGTGCCCTCGCTCGTATCGCTGCTCGTGGCG AGCTCAAACTCGGCGAGGAAACCAAGTTCGCAGGCGCATTCCGCACCCACGGACTAGTCGTGCCAGTGTGGGATCTCGAC CCAGAGCGCGCACCAGAAAGCTACGCCGACGACCTCGTTGCGTTGAACGAGAAGATCGAAGCAGAGCTAGCTAACGACGC CCAGCTCACCGCCGATGAGCGCAAGCAGCTCGAAAACATCAAGTCCCGTCAGGTGACCATCCGCTAA
Upstream 100 bases:
>100_bases TGCTGGCCACGGATTACCCGGATGTAGCTCTTGAGGCGCTCGCCCAATAGACTTATCCGTTATGGCTAAGAAAAAGAAGA AGGAACAGCTGCCTGAGGGC
Downstream 100 bases:
>100_bases CGCGGCACCGACAACAAAAGGAATGCCACCAAGGATCATGCGGTCCTGGGTGGCATTGCTGCTATTGGCAGGTTGACGTG AAGTTGCGGTCGTTGTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: SEC-C Motif Domain-Containing Protein; SecC Domain-Containing Protein-Containing Protein; SecC Motif-Containing Protein; SEC-C Domain-Containing Protein
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MSRRQAKLAARAAERAAFERDPRPYGGFSFETDLVAVQEFVPSAIAKIEVEGLDNVYLCTVLPGGSAALVREESAGGEVF VALQTQARSQNPNRDLAYALNWAKTAKPGDILEKGLADGTEPKLAELLKDQTLKITEYSNFDWWLPEGTTVNPMQAQAIQ AANDSVLPSARVDAPVPGTVWWINPGEKAHIRWVRAEAEDALLRALARIAARGELKLGEETKFAGAFRTHGLVVPVWDLD PERAPESYADDLVALNEKIEAELANDAQLTADERKQLENIKSRQVTIR
Sequences:
>Translated_288_residues MSRRQAKLAARAAERAAFERDPRPYGGFSFETDLVAVQEFVPSAIAKIEVEGLDNVYLCTVLPGGSAALVREESAGGEVF VALQTQARSQNPNRDLAYALNWAKTAKPGDILEKGLADGTEPKLAELLKDQTLKITEYSNFDWWLPEGTTVNPMQAQAIQ AANDSVLPSARVDAPVPGTVWWINPGEKAHIRWVRAEAEDALLRALARIAARGELKLGEETKFAGAFRTHGLVVPVWDLD PERAPESYADDLVALNEKIEAELANDAQLTADERKQLENIKSRQVTIR >Mature_287_residues SRRQAKLAARAAERAAFERDPRPYGGFSFETDLVAVQEFVPSAIAKIEVEGLDNVYLCTVLPGGSAALVREESAGGEVFV ALQTQARSQNPNRDLAYALNWAKTAKPGDILEKGLADGTEPKLAELLKDQTLKITEYSNFDWWLPEGTTVNPMQAQAIQA ANDSVLPSARVDAPVPGTVWWINPGEKAHIRWVRAEAEDALLRALARIAARGELKLGEETKFAGAFRTHGLVVPVWDLDP ERAPESYADDLVALNEKIEAELANDAQLTADERKQLENIKSRQVTIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31642; Mature: 31511
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRQAKLAARAAERAAFERDPRPYGGFSFETDLVAVQEFVPSAIAKIEVEGLDNVYLCT CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCEEEEE VLPGGSAALVREESAGGEVFVALQTQARSQNPNRDLAYALNWAKTAKPGDILEKGLADGT EECCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCC EPKLAELLKDQTLKITEYSNFDWWLPEGTTVNPMQAQAIQAANDSVLPSARVDAPVPGTV CHHHHHHHHCCCEEEEEECCCCEECCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCEE WWINPGEKAHIRWVRAEAEDALLRALARIAARGELKLGEETKFAGAFRTHGLVVPVWDLD EEECCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCEEEEEECCC PERAPESYADDLVALNEKIEAELANDAQLTADERKQLENIKSRQVTIR CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCEEEEC >Mature Secondary Structure SRRQAKLAARAAERAAFERDPRPYGGFSFETDLVAVQEFVPSAIAKIEVEGLDNVYLCT CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCEEEEE VLPGGSAALVREESAGGEVFVALQTQARSQNPNRDLAYALNWAKTAKPGDILEKGLADGT EECCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCC EPKLAELLKDQTLKITEYSNFDWWLPEGTTVNPMQAQAIQAANDSVLPSARVDAPVPGTV CHHHHHHHHCCCEEEEEECCCCEECCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCEE WWINPGEKAHIRWVRAEAEDALLRALARIAARGELKLGEETKFAGAFRTHGLVVPVWDLD EEECCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCEEEEEECCC PERAPESYADDLVALNEKIEAELANDAQLTADERKQLENIKSRQVTIR CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA