| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234381
Identifier: 38234381
GI number: 38234381
Start: 1859708
End: 1860913
Strand: Reverse
Name: 38234381
Synonym: DIP1810
Alternate gene names: NA
Gene position: 1860913-1859708 (Counterclockwise)
Preceding gene: 38234386
Following gene: 38234376
Centisome position: 74.78
GC content: 59.2
Gene sequence:
>1206_bases ATGGCTAACCAACAACTGAATGCCCGAAAATTTATCTGGTCCAATGGGCTGCAAAACATTGGCGACCAGATCGTCGCCGC CAAAACGGTGCTGCCGTGGCTGCTACACGCAGCAGACGCGTCGGGATTTTTCATTGCACTGTTGGTTCCAGTGCGAGAAG CCGGCTCAATGCTGCCCCAAGCAGCACTCACACCTTGGGTAGTGGGCAAACCACAGCGCAAAACCATCTGGGTCATGGGG GCGGTGGGGCAGGCAGCGGCAGCGGCAGGACTGGCGATAGCTGCGGCACTGCTACAGGGGACGTCGTTAGCCGTGGCGGT GATCGTGCTGCTAGCGGGACTGTCGCTGGCGCGCTCGCTGACGTCGATAGCCTCGAAAGATGTGCAAGGTCGCGTGGTGC CCAAAGGCTCGCGTGGCCTGGTAACCGGCAAAGCGACCGCGCTCGGCGGTGCCGCCTCCTTGATTGTGGGAGCCTCACTG TGGCTGCTGCGCGAGCATATCACCCAAACCGTGATCGTGGGACTCATCGTGCTTGCAGCGCTCGCATGGCTCGTAGCAGC GCTTGTGTTTCACACGATAACCGAGCCAGAGGAACAAACACACACCCAATCCACAAACTGGTGGAGTGACACCTGGCAGC TATTCGTGGGCGACAAAGACTTCCGCCTATTCGTGATCGTGCGTGCTTTCTTACTCGTCAGCGCCTTGTCTACTTCCTTC ATCGTGGTGCTGAGCAACCAAGAAGGCGCCTCACTCGGCGGGCTCGGCGTATTCATGCTGGCATCAGGGCTATCGGCGCT GGTAGGCGGGCGAATCTCCGGCGTATGGTCCGACTACTCCTCACGCGCAGTAATGAGCTACGGTGCGCTAGCAAGTTCCA TCGTGGTTCTGGTGATCGTAGCGTGCTCCTGGTGGGCGCCCAGCGCACTCAACGTATGGCTGTTCCCGCTGAGCTTCTTC GTAGTCAACGTGGTCCACACCGGAATCCGTGTGGCACGCAAAACCTACATCGTGGATATGGCCGAAGGTGATCAACGCAC CCGCTACGTCGGCGCGGCCAACACACTCATGGGCGTGATTTTGCTTATCGTCGGCGTGATCTCCGGTACTATCGCACACT GGGGTCCGCAACCAGCACTACTGTTCCTAGCGGCCATCGGGCTTGCAGGAGCTGCAACGTCGCACAAGCTTAAAGACGTG GAATAA
Upstream 100 bases:
>100_bases ACAAGGGTGTTCCTTGGGTTTACGTAGTCTTGGATTCGAGGAGGCGAAAACGATTGCCTAAAAGCACCCGCCCCACGCCA CAGTCCTAGGATAAAGACTT
Downstream 100 bases:
>100_bases CAAAAACGACCCACAATGTGAACTGAGCCCCGTTTTCCGGACTGGGTTAATTCTAAACGGTTAGGGTCTTTGCAAGGGTC TGGTTCCGATATTGCATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Permease Facilitator Superfamily; Facilitator Superfamily Permease; Permease Of Facilitator Superfamily Protein; Facilitator Superfamily Protein; Permease Of Facilitator Superfamily; Facilitator Family Protein
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MANQQLNARKFIWSNGLQNIGDQIVAAKTVLPWLLHAADASGFFIALLVPVREAGSMLPQAALTPWVVGKPQRKTIWVMG AVGQAAAAAGLAIAAALLQGTSLAVAVIVLLAGLSLARSLTSIASKDVQGRVVPKGSRGLVTGKATALGGAASLIVGASL WLLREHITQTVIVGLIVLAALAWLVAALVFHTITEPEEQTHTQSTNWWSDTWQLFVGDKDFRLFVIVRAFLLVSALSTSF IVVLSNQEGASLGGLGVFMLASGLSALVGGRISGVWSDYSSRAVMSYGALASSIVVLVIVACSWWAPSALNVWLFPLSFF VVNVVHTGIRVARKTYIVDMAEGDQRTRYVGAANTLMGVILLIVGVISGTIAHWGPQPALLFLAAIGLAGAATSHKLKDV E
Sequences:
>Translated_401_residues MANQQLNARKFIWSNGLQNIGDQIVAAKTVLPWLLHAADASGFFIALLVPVREAGSMLPQAALTPWVVGKPQRKTIWVMG AVGQAAAAAGLAIAAALLQGTSLAVAVIVLLAGLSLARSLTSIASKDVQGRVVPKGSRGLVTGKATALGGAASLIVGASL WLLREHITQTVIVGLIVLAALAWLVAALVFHTITEPEEQTHTQSTNWWSDTWQLFVGDKDFRLFVIVRAFLLVSALSTSF IVVLSNQEGASLGGLGVFMLASGLSALVGGRISGVWSDYSSRAVMSYGALASSIVVLVIVACSWWAPSALNVWLFPLSFF VVNVVHTGIRVARKTYIVDMAEGDQRTRYVGAANTLMGVILLIVGVISGTIAHWGPQPALLFLAAIGLAGAATSHKLKDV E >Mature_400_residues ANQQLNARKFIWSNGLQNIGDQIVAAKTVLPWLLHAADASGFFIALLVPVREAGSMLPQAALTPWVVGKPQRKTIWVMGA VGQAAAAAGLAIAAALLQGTSLAVAVIVLLAGLSLARSLTSIASKDVQGRVVPKGSRGLVTGKATALGGAASLIVGASLW LLREHITQTVIVGLIVLAALAWLVAALVFHTITEPEEQTHTQSTNWWSDTWQLFVGDKDFRLFVIVRAFLLVSALSTSFI VVLSNQEGASLGGLGVFMLASGLSALVGGRISGVWSDYSSRAVMSYGALASSIVVLVIVACSWWAPSALNVWLFPLSFFV VNVVHTGIRVARKTYIVDMAEGDQRTRYVGAANTLMGVILLIVGVISGTIAHWGPQPALLFLAAIGLAGAATSHKLKDVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42132; Mature: 42001
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANQQLNARKFIWSNGLQNIGDQIVAAKTVLPWLLHAADASGFFIALLVPVREAGSMLPQ CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCH AALTPWVVGKPQRKTIWVMGAVGQAAAAAGLAIAAALLQGTSLAVAVIVLLAGLSLARSL HHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH TSIASKDVQGRVVPKGSRGLVTGKATALGGAASLIVGASLWLLREHITQTVIVGLIVLAA HHHHHCCCCCCEECCCCCCEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAWLVAALVFHTITEPEEQTHTQSTNWWSDTWQLFVGDKDFRLFVIVRAFLLVSALSTSF HHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCE IVVLSNQEGASLGGLGVFMLASGLSALVGGRISGVWSDYSSRAVMSYGALASSIVVLVIV EEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ACSWWAPSALNVWLFPLSFFVVNVVHTGIRVARKTYIVDMAEGDQRTRYVGAANTLMGVI HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHH LLIVGVISGTIAHWGPQPALLFLAAIGLAGAATSHKLKDVE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure ANQQLNARKFIWSNGLQNIGDQIVAAKTVLPWLLHAADASGFFIALLVPVREAGSMLPQ CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCH AALTPWVVGKPQRKTIWVMGAVGQAAAAAGLAIAAALLQGTSLAVAVIVLLAGLSLARSL HHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH TSIASKDVQGRVVPKGSRGLVTGKATALGGAASLIVGASLWLLREHITQTVIVGLIVLAA HHHHHCCCCCCEECCCCCCEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAWLVAALVFHTITEPEEQTHTQSTNWWSDTWQLFVGDKDFRLFVIVRAFLLVSALSTSF HHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCE IVVLSNQEGASLGGLGVFMLASGLSALVGGRISGVWSDYSSRAVMSYGALASSIVVLVIV EEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ACSWWAPSALNVWLFPLSFFVVNVVHTGIRVARKTYIVDMAEGDQRTRYVGAANTLMGVI HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHH LLIVGVISGTIAHWGPQPALLFLAAIGLAGAATSHKLKDVE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA