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The map label for this gene is 38234376

Identifier: 38234376

GI number: 38234376

Start: 1853467

End: 1855503

Strand: Reverse

Name: 38234376

Synonym: DIP1805

Alternate gene names: NA

Gene position: 1855503-1853467 (Counterclockwise)

Preceding gene: 38234381

Following gene: 38234375

Centisome position: 74.56

GC content: 56.65

Gene sequence:

>2037_bases
ATGTCAGAACCGGTATCGCGTCAAGTTCGAAGCACTTGGCCGCTCTACGTGATGTTTTTCGTGGTCGCGGGTATGGTCGG
TGCCCTCATCTCGTGGGGATTCCTCAGCGAATCACTCGCAGCACTCGGCATTCCCGACCCAGGCCCCATTACAACCGCAG
GCCTGCCATTCTTGCGCGCCGGGGGATGGATGCTCATAGCTCTTGCCACGGGATCCTTTATGGCGTCGACGTTTTTCATC
TCGCCGCGTCCGGCACCGAAGCTTATCGACGCTACCCTCACCGTCGACGGACACATCGCCGCCCGCACCGGTTCCATGTC
GCTGCTCTCATTCGCAGCCATCGCCATCGTGATGATTCCGCTCGTACTTTCCGACGTCTCCGGCCAGCCGTTTTCCCTAG
CAGTCCAGCCCGTTAACTGGCCTAACGCTATCGAAAAAGTGCCAGCAGCGCTGGCATGGCTGTGCACCGCGATCATCTCT
GCTGTAGTGGGCACAGCCTCGTTGCGCTCGCAGCGGTGGAAGAGCCAACCCGTGTGGTTTATCGGAGCAATAGCAGCCAT
CGTGCCCCTTGGCTTGGAGGGGCACTCTGCCGCAGGTGGCGACCACGACTACGGCACCAATTCGCTTCTGTGGCACCTCC
TATTTATGTTGCTGTGGGTCGGCGGGCTCATGGGACTGATCGCACACGGGCGTCGTCTAGGCGTAGACCTCGCCACTGCT
GTCCGGCGCTATTCTCACGTAGCACTGTGGGCAATTATTGCTATGACCCTATCAGGTTTGATCAACGCTGCTATCCGCGT
GCGTCTAGAAGATCTGCTGACGTCTGGATACGGCCGGATGATTGTGGTCAAAGCAGTACTTACTATTGTGCTCGCCCTGT
TTGGATTCGCACACCGCAGCATCACCATCAAGGAACTAGAACGAAGTGCTAGCGGCGCACCATTTATCAGACTCGCCATC
GCAGAGCTCGTGGTCATGGCGGCGATTATCGGTGTGGCTATTTCGCTGGGACGCACCCCGCCACCGCCGCCACGTGTTAT
TGATCTGACCCCCATGGCGCTGGAGATGGGCTACACCCTGACCAAAGCGCCCACCGTATGGAACGTGTGGACCACCTGGC
GTTTTGACATCATGTTCACCACCATCGGCATCCTCATGACTGTTGCCTACATCATGGGCGTGCGCACCCTCAAAGCCCGC
GGCGAATCATGGAAGCCCATGCGCACCTTCTGGTTCCTCCTCGGCTCGGTAGGACTAGCACTGAGCATGAGCTCCGGCGT
AGGCCTCTACATGCCAGCCATGTTCTCCATGCACATGGTCACTCACATGGTGCTGTCCATGGTCATCCCAGTGTTCTTGG
TGCTCGGTAACCCCTTCGAACTCGCATTAGCTGCACTACCGCAGGGGACGTCGCAACGCCCCGGCGCGCGCGAGTGGCTG
GAAGTGTTCCTCAACTCCACCACGTTGCGTATCCTCATGCACCCAGCGCTGAACACGATCCAGTTCATTACGATCTTCTA
CCTGCTGTATGTGACTCCTTGGTACAACGTGATGGTGTCTGAGCACGCAGGGCATTTGTCCATGAACTTTGTGTTCTTAC
TTTCTGGATACATCTATTACTGGGAGATGATCGGCGGAGACCCCAAGCCGGTGTACAACTCGGTGATCAAGAGGTTGTCG
TGGCTGATTTTCTCCATGCCCTTCCACCTGTATTTTGGTGTGTACCTTATGCAGCTCTCGCAGATCTTGGCGGAGGACTT
CTACTCGCAGCTCGACCTGCCGTGGGCAGTGGACCTTATGCACGATCAAAATGTTGGTGGCGGAATTGCGTGGGCCTCGG
GTTCCTTCCCGCTGATCGTGGTGTTTGGCACCTTGTTTATTCAGTGGCTGCAAGAAGATAGGAAAGAAGAAGCCGAGATT
GAGCAGCGCGTGGAAAACCACGAGGATGATGATTTTGATGCCTATAACGAGATGCTTGCGCGGATGAATTCTGGGCGTCA
AGACGCGGTGTCTGATTACCACAATCGCGAATTTTAG

Upstream 100 bases:

>100_bases
TTAGGTACGTATATCCAGCATGAGATAACTCATAGGGCGATAAGTTGCATTCGCGCCTCTACTAGGGGTAAACAGTGTTC
AAGATATAGGCTTGGGAGTT

Downstream 100 bases:

>100_bases
GCAGAACCGGTACTGAGGATCTGTGGATAACTCCCGTAACAGGCAAGGGGGAGGGGAAGTTATCCACAGATTTTGGTGTT
TCTGGGGTCAGGCGGTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 678; Mature: 677

Protein sequence:

>678_residues
MSEPVSRQVRSTWPLYVMFFVVAGMVGALISWGFLSESLAALGIPDPGPITTAGLPFLRAGGWMLIALATGSFMASTFFI
SPRPAPKLIDATLTVDGHIAARTGSMSLLSFAAIAIVMIPLVLSDVSGQPFSLAVQPVNWPNAIEKVPAALAWLCTAIIS
AVVGTASLRSQRWKSQPVWFIGAIAAIVPLGLEGHSAAGGDHDYGTNSLLWHLLFMLLWVGGLMGLIAHGRRLGVDLATA
VRRYSHVALWAIIAMTLSGLINAAIRVRLEDLLTSGYGRMIVVKAVLTIVLALFGFAHRSITIKELERSASGAPFIRLAI
AELVVMAAIIGVAISLGRTPPPPPRVIDLTPMALEMGYTLTKAPTVWNVWTTWRFDIMFTTIGILMTVAYIMGVRTLKAR
GESWKPMRTFWFLLGSVGLALSMSSGVGLYMPAMFSMHMVTHMVLSMVIPVFLVLGNPFELALAALPQGTSQRPGAREWL
EVFLNSTTLRILMHPALNTIQFITIFYLLYVTPWYNVMVSEHAGHLSMNFVFLLSGYIYYWEMIGGDPKPVYNSVIKRLS
WLIFSMPFHLYFGVYLMQLSQILAEDFYSQLDLPWAVDLMHDQNVGGGIAWASGSFPLIVVFGTLFIQWLQEDRKEEAEI
EQRVENHEDDDFDAYNEMLARMNSGRQDAVSDYHNREF

Sequences:

>Translated_678_residues
MSEPVSRQVRSTWPLYVMFFVVAGMVGALISWGFLSESLAALGIPDPGPITTAGLPFLRAGGWMLIALATGSFMASTFFI
SPRPAPKLIDATLTVDGHIAARTGSMSLLSFAAIAIVMIPLVLSDVSGQPFSLAVQPVNWPNAIEKVPAALAWLCTAIIS
AVVGTASLRSQRWKSQPVWFIGAIAAIVPLGLEGHSAAGGDHDYGTNSLLWHLLFMLLWVGGLMGLIAHGRRLGVDLATA
VRRYSHVALWAIIAMTLSGLINAAIRVRLEDLLTSGYGRMIVVKAVLTIVLALFGFAHRSITIKELERSASGAPFIRLAI
AELVVMAAIIGVAISLGRTPPPPPRVIDLTPMALEMGYTLTKAPTVWNVWTTWRFDIMFTTIGILMTVAYIMGVRTLKAR
GESWKPMRTFWFLLGSVGLALSMSSGVGLYMPAMFSMHMVTHMVLSMVIPVFLVLGNPFELALAALPQGTSQRPGAREWL
EVFLNSTTLRILMHPALNTIQFITIFYLLYVTPWYNVMVSEHAGHLSMNFVFLLSGYIYYWEMIGGDPKPVYNSVIKRLS
WLIFSMPFHLYFGVYLMQLSQILAEDFYSQLDLPWAVDLMHDQNVGGGIAWASGSFPLIVVFGTLFIQWLQEDRKEEAEI
EQRVENHEDDDFDAYNEMLARMNSGRQDAVSDYHNREF
>Mature_677_residues
SEPVSRQVRSTWPLYVMFFVVAGMVGALISWGFLSESLAALGIPDPGPITTAGLPFLRAGGWMLIALATGSFMASTFFIS
PRPAPKLIDATLTVDGHIAARTGSMSLLSFAAIAIVMIPLVLSDVSGQPFSLAVQPVNWPNAIEKVPAALAWLCTAIISA
VVGTASLRSQRWKSQPVWFIGAIAAIVPLGLEGHSAAGGDHDYGTNSLLWHLLFMLLWVGGLMGLIAHGRRLGVDLATAV
RRYSHVALWAIIAMTLSGLINAAIRVRLEDLLTSGYGRMIVVKAVLTIVLALFGFAHRSITIKELERSASGAPFIRLAIA
ELVVMAAIIGVAISLGRTPPPPPRVIDLTPMALEMGYTLTKAPTVWNVWTTWRFDIMFTTIGILMTVAYIMGVRTLKARG
ESWKPMRTFWFLLGSVGLALSMSSGVGLYMPAMFSMHMVTHMVLSMVIPVFLVLGNPFELALAALPQGTSQRPGAREWLE
VFLNSTTLRILMHPALNTIQFITIFYLLYVTPWYNVMVSEHAGHLSMNFVFLLSGYIYYWEMIGGDPKPVYNSVIKRLSW
LIFSMPFHLYFGVYLMQLSQILAEDFYSQLDLPWAVDLMHDQNVGGGIAWASGSFPLIVVFGTLFIQWLQEDRKEEAEIE
QRVENHEDDDFDAYNEMLARMNSGRQDAVSDYHNREF

Specific function: Unknown

COG id: COG3336

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv0102 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008457
- InterPro:   IPR019108 [H]

Pfam domain/function: PF09678 Caa3_CtaG; PF05425 CopD [H]

EC number: NA

Molecular weight: Translated: 74844; Mature: 74713

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPVSRQVRSTWPLYVMFFVVAGMVGALISWGFLSESLAALGIPDPGPITTAGLPFLRA
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHC
GGWMLIALATGSFMASTFFISPRPAPKLIDATLTVDGHIAARTGSMSLLSFAAIAIVMIP
CCEEEEEEECCCHHHHEEEECCCCCCCCEEEEEEECCEEEECCCCHHHHHHHHHHHHHHH
LVLSDVSGQPFSLAVQPVNWPNAIEKVPAALAWLCTAIISAVVGTASLRSQRWKSQPVWF
HHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
IGAIAAIVPLGLEGHSAAGGDHDYGTNSLLWHLLFMLLWVGGLMGLIAHGRRLGVDLATA
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHH
VRRYSHVALWAIIAMTLSGLINAAIRVRLEDLLTSGYGRMIVVKAVLTIVLALFGFAHRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
ITIKELERSASGAPFIRLAIAELVVMAAIIGVAISLGRTPPPPPRVIDLTPMALEMGYTL
EEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHCCEE
TKAPTVWNVWTTWRFDIMFTTIGILMTVAYIMGVRTLKARGESWKPMRTFWFLLGSVGLA
ECCCCEEEEEHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LSMSSGVGLYMPAMFSMHMVTHMVLSMVIPVFLVLGNPFELALAALPQGTSQRPGAREWL
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHH
EVFLNSTTLRILMHPALNTIQFITIFYLLYVTPWYNVMVSEHAGHLSMNFVFLLSGYIYY
HHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
WEMIGGDPKPVYNSVIKRLSWLIFSMPFHLYFGVYLMQLSQILAEDFYSQLDLPWAVDLM
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEH
HDQNVGGGIAWASGSFPLIVVFGTLFIQWLQEDRKEEAEIEQRVENHEDDDFDAYNEMLA
CCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RMNSGRQDAVSDYHNREF
HHCCCCHHHHHHHCCCCC
>Mature Secondary Structure 
SEPVSRQVRSTWPLYVMFFVVAGMVGALISWGFLSESLAALGIPDPGPITTAGLPFLRA
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHC
GGWMLIALATGSFMASTFFISPRPAPKLIDATLTVDGHIAARTGSMSLLSFAAIAIVMIP
CCEEEEEEECCCHHHHEEEECCCCCCCCEEEEEEECCEEEECCCCHHHHHHHHHHHHHHH
LVLSDVSGQPFSLAVQPVNWPNAIEKVPAALAWLCTAIISAVVGTASLRSQRWKSQPVWF
HHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
IGAIAAIVPLGLEGHSAAGGDHDYGTNSLLWHLLFMLLWVGGLMGLIAHGRRLGVDLATA
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHH
VRRYSHVALWAIIAMTLSGLINAAIRVRLEDLLTSGYGRMIVVKAVLTIVLALFGFAHRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
ITIKELERSASGAPFIRLAIAELVVMAAIIGVAISLGRTPPPPPRVIDLTPMALEMGYTL
EEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHCCEE
TKAPTVWNVWTTWRFDIMFTTIGILMTVAYIMGVRTLKARGESWKPMRTFWFLLGSVGLA
ECCCCEEEEEHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LSMSSGVGLYMPAMFSMHMVTHMVLSMVIPVFLVLGNPFELALAALPQGTSQRPGAREWL
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHH
EVFLNSTTLRILMHPALNTIQFITIFYLLYVTPWYNVMVSEHAGHLSMNFVFLLSGYIYY
HHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
WEMIGGDPKPVYNSVIKRLSWLIFSMPFHLYFGVYLMQLSQILAEDFYSQLDLPWAVDLM
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEH
HDQNVGGGIAWASGSFPLIVVFGTLFIQWLQEDRKEEAEIEQRVENHEDDDFDAYNEMLA
CCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RMNSGRQDAVSDYHNREF
HHCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7476188; 11234002 [H]