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The map label for this gene is 38234386

Identifier: 38234386

GI number: 38234386

Start: 1864869

End: 1866038

Strand: Reverse

Name: 38234386

Synonym: DIP1815

Alternate gene names: NA

Gene position: 1866038-1864869 (Counterclockwise)

Preceding gene: 38234387

Following gene: 38234381

Centisome position: 74.98

GC content: 59.74

Gene sequence:

>1170_bases
GTGGTGAGCAAGCGCTGTTATGTGCGGGTGGTCGCCCTAGTGGCGGGCCTCGCGTTCGGGGTAACGGGATGTACGATTGA
TTCGGCAAGCCCAGAAAAAGAACAAGCGGCCTCGACGACTGTAGAAAAGAAACCGGCACCCGTTGTGAGTGTGTCGGATG
GGGCGTCCAAGGTAAACCCTGCGGACCCCGTGGTGGTGAAGTCCCTCGGCGAGGGTCTATCTGATGTCACCATGACCAAT
GAAAACGGCAAGGTCGTCGAAGGGGAGATGGCGGCCGACGCCCGTTCCTGGCGCACCGCCGAACCTCTTGGCTACTCGCG
TAGCTATACCGTGGTGGCCACCGACCGTAACGGGGAGAAAACCACCACGGAGTTCACCACCGTGGTCCCCGACGGCCAAG
CCTTCGCGTCGCTTGCGCCTCTCGACGGCGCCACCGTGGGCGTAGCCCAAGTCATCGCGCTGCGCTTCGACTACGTGGTC
AACGACCGCAAGGCTGTTGAAGACGCCGTCAAAATCACCACCGAGCCGGCTGTAGAAGGTGCATTCTTTTGGATCAGCCC
CTACGAGGTTCGCTGGCGCCCCGAACACTTCTGGGAGCCTGGCACCCAAGTCACTGTCAAAGCTGACCTCTACGGCAAAG
ACTTGGGCAATGGAATCTACGGCGACAATGACAACTCCGCCACCTTCGCCATCGGCGACCGCGTTGAGGCTGTAGCCGAC
GATGCCACCAAGACCATGGTGATCTACAAAAACGGCCAACAGGTCAACTCCATGCCCGTCTCCATGGGTGCCAACAAGTG
GCCAACGCCAAACGGCATTTACACCATCGGCGACAAAAACCCCTCGCTAATCATGGACTCCGAAACTTATGGCCTAGCTC
ACAACGACGGTGGCTACCGCACAGAGGTGAAATTTGCCACGCAAATGTCTTACTCCGGCATCTACGTCCACGCAGCACCT
TGGTCCGTGTGGGCGCAGGGGAGCAGCAACACCTCCCACGGCTGCATCAACGTGAGCACCGACAACGCCGCGTGGTTCCA
GAACTACGTCAAACGAGGCGACATCGTCCGCGTACAAAACACCATCGGTGGCACCCTGAACGGCTACGACGGCCTCGGAG
ACTGGAACATTGACTGGGCAACGTGGAGGGCCGGCAACGCCAACGGTTAA

Upstream 100 bases:

>100_bases
GGTGACCTAGGTGGCAATGGCTCTAGAGCATAGGATGGAAACCTGTTGTCTTCGCGGGTTATGCGCGGTCGAACGGCTTA
GTAATAAGAGAAGAGGGACA

Downstream 100 bases:

>100_bases
TTAATCCGCAATTGGTCCAAGAGGAAGACGACATGACCCCATGTTGATACCCTCTTGGGTCGATATTTTTTCTTTCAAGA
ACTGAATGGGGTGGTGGGCA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MVSKRCYVRVVALVAGLAFGVTGCTIDSASPEKEQAASTTVEKKPAPVVSVSDGASKVNPADPVVVKSLGEGLSDVTMTN
ENGKVVEGEMAADARSWRTAEPLGYSRSYTVVATDRNGEKTTTEFTTVVPDGQAFASLAPLDGATVGVAQVIALRFDYVV
NDRKAVEDAVKITTEPAVEGAFFWISPYEVRWRPEHFWEPGTQVTVKADLYGKDLGNGIYGDNDNSATFAIGDRVEAVAD
DATKTMVIYKNGQQVNSMPVSMGANKWPTPNGIYTIGDKNPSLIMDSETYGLAHNDGGYRTEVKFATQMSYSGIYVHAAP
WSVWAQGSSNTSHGCINVSTDNAAWFQNYVKRGDIVRVQNTIGGTLNGYDGLGDWNIDWATWRAGNANG

Sequences:

>Translated_389_residues
MVSKRCYVRVVALVAGLAFGVTGCTIDSASPEKEQAASTTVEKKPAPVVSVSDGASKVNPADPVVVKSLGEGLSDVTMTN
ENGKVVEGEMAADARSWRTAEPLGYSRSYTVVATDRNGEKTTTEFTTVVPDGQAFASLAPLDGATVGVAQVIALRFDYVV
NDRKAVEDAVKITTEPAVEGAFFWISPYEVRWRPEHFWEPGTQVTVKADLYGKDLGNGIYGDNDNSATFAIGDRVEAVAD
DATKTMVIYKNGQQVNSMPVSMGANKWPTPNGIYTIGDKNPSLIMDSETYGLAHNDGGYRTEVKFATQMSYSGIYVHAAP
WSVWAQGSSNTSHGCINVSTDNAAWFQNYVKRGDIVRVQNTIGGTLNGYDGLGDWNIDWATWRAGNANG
>Mature_389_residues
MVSKRCYVRVVALVAGLAFGVTGCTIDSASPEKEQAASTTVEKKPAPVVSVSDGASKVNPADPVVVKSLGEGLSDVTMTN
ENGKVVEGEMAADARSWRTAEPLGYSRSYTVVATDRNGEKTTTEFTTVVPDGQAFASLAPLDGATVGVAQVIALRFDYVV
NDRKAVEDAVKITTEPAVEGAFFWISPYEVRWRPEHFWEPGTQVTVKADLYGKDLGNGIYGDNDNSATFAIGDRVEAVAD
DATKTMVIYKNGQQVNSMPVSMGANKWPTPNGIYTIGDKNPSLIMDSETYGLAHNDGGYRTEVKFATQMSYSGIYVHAAP
WSVWAQGSSNTSHGCINVSTDNAAWFQNYVKRGDIVRVQNTIGGTLNGYDGLGDWNIDWATWRAGNANG

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 41771; Mature: 41771

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSKRCYVRVVALVAGLAFGVTGCTIDSASPEKEQAASTTVEKKPAPVVSVSDGASKVNP
CCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCC
ADPVVVKSLGEGLSDVTMTNENGKVVEGEMAADARSWRTAEPLGYSRSYTVVATDRNGEK
CCCHHHHHHCCCCCCEEEECCCCCEEECHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCE
TTTEFTTVVPDGQAFASLAPLDGATVGVAQVIALRFDYVVNDRKAVEDAVKITTEPAVEG
EEEEEEEECCCCHHHHEECCCCCCHHHHHHHHHHHHHHEECCHHHHHHHHEEECCCCCCC
AFFWISPYEVRWRPEHFWEPGTQVTVKADLYGKDLGNGIYGDNDNSATFAIGDRVEAVAD
EEEEECCEEEEECHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCHHHHHC
DATKTMVIYKNGQQVNSMPVSMGANKWPTPNGIYTIGDKNPSLIMDSETYGLAHNDGGYR
CCCEEEEEEECCCCCCCEEEECCCCCCCCCCCEEEECCCCCCEEEECCCCCEEECCCCEE
TEVKFATQMSYSGIYVHAAPWSVWAQGSSNTSHGCINVSTDNAAWFQNYVKRGDIVRVQN
EEEEEEEEECCCEEEEEECCCEEEECCCCCCCCCEEEEECCCHHHHHHHHHCCCEEEEEC
TIGGTLNGYDGLGDWNIDWATWRAGNANG
CCCCCCCCCCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MVSKRCYVRVVALVAGLAFGVTGCTIDSASPEKEQAASTTVEKKPAPVVSVSDGASKVNP
CCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCC
ADPVVVKSLGEGLSDVTMTNENGKVVEGEMAADARSWRTAEPLGYSRSYTVVATDRNGEK
CCCHHHHHHCCCCCCEEEECCCCCEEECHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCE
TTTEFTTVVPDGQAFASLAPLDGATVGVAQVIALRFDYVVNDRKAVEDAVKITTEPAVEG
EEEEEEEECCCCHHHHEECCCCCCHHHHHHHHHHHHHHEECCHHHHHHHHEEECCCCCCC
AFFWISPYEVRWRPEHFWEPGTQVTVKADLYGKDLGNGIYGDNDNSATFAIGDRVEAVAD
EEEEECCEEEEECHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCHHHHHC
DATKTMVIYKNGQQVNSMPVSMGANKWPTPNGIYTIGDKNPSLIMDSETYGLAHNDGGYR
CCCEEEEEEECCCCCCCEEEECCCCCCCCCCCEEEECCCCCCEEEECCCCCEEECCCCEE
TEVKFATQMSYSGIYVHAAPWSVWAQGSSNTSHGCINVSTDNAAWFQNYVKRGDIVRVQN
EEEEEEEEECCCEEEEEECCCEEEECCCCCCCCCEEEEECCCHHHHHHHHHCCCEEEEEC
TIGGTLNGYDGLGDWNIDWATWRAGNANG
CCCCCCCCCCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]