| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is ybeZ [C]
Identifier: 38234289
GI number: 38234289
Start: 1754595
End: 1755563
Strand: Reverse
Name: ybeZ [C]
Synonym: DIP1718
Alternate gene names: 38234289
Gene position: 1755563-1754595 (Counterclockwise)
Preceding gene: 38234290
Following gene: 38234288
Centisome position: 70.54
GC content: 50.36
Gene sequence:
>969_bases TTGGCTGACTTTATAACTCGCGCCATTGAACTGGACGAGCAATACTCTCAAGCAATTTTGGGGATCAATGATCAAAACCT CAAAGTGCTGGAAAACCTACTCGATTGCACCATTTTTGTGCGCGGTACCCGTGCGACGCTCAGCGGGCGCGATTTTGAAG TTTCTCGTGGCATTCGCGTGCTACAAGAATTGCAATCCATGGCAAAACGCGGGCATGCGATTAGCCCAGATGCCGTGAAA AATGCAGTAGCAATCGTCGCAGAAGACACCCCGCATTCTGTAAATGCTGTGCTGGCAAGTGACATCGTGGCACGTCGCGG CAAAGTCATTCGCGCCAAAACCCTTGGTCAGAAAGACTACGTTGATGCTATCGACCACAACACCATTGTGTTTGGTTTAG GTCCTGCCGGTTCTGGAAAAACCTATTTGGCGATGGCTAAGGCCGTGCAAGCTTTGCAGGCTAAACAAGTCAACCGCATT ATTTTGACGCGACCTGCGGTTGAAGCCGGCGAAAAGCTGGGATTTTTGCCTGGCACGCTTAATGAGAAAATCGACCCCTA TTTGCGTCCGCTTCACGACGCTTTGCGCGACATGGTGGACCCAGAAATTATTCCTAAGCTCATGGAGGCCGGAATCGTTG AAGTAGCTCCGCTGGCTTATATGCGTGGTCGAACGCTCAACGATGCGTTTGTGATTTTGGATGAGGCCCAAAACACCACT CCTGCCCAGATGAAGATGTTTTTAACTCGTCTCGGGTTTGGATCCAAGATGGTGGTCACAGGTGACATCACGCAGGTGGA TCTGCCTGGGGGACAAAAATCTGGTTTGCGGTTAGTTCGCGATATTCTTCGTGGAGTAGAAGGCGTTCACTTTGCCGAGC TTGGTTCGGACGATGTGGTTCGCCACCAACTTGTGGGCCGGATCGTTGATGCATATGACGCCTATGAAGAACAACTAAAG GACAAATAA
Upstream 100 bases:
>100_bases CAGCGGGAATCGTGGCGCTGGCTGCTCTCGGAGTACAGACTTCTCGCTGGTAGTGTGGCAAACAACGAACATTTTCTCTC AGATAGGTTGAACCGAAACG
Downstream 100 bases:
>100_bases ATGAGTATCGAAGTTGTTAACGAATCTGGCTTCGACGGCGTTAACGAAGAAGCGCTTATCGACGTCGCCACGTTCGTGCT CGGCGAGATGGATGTGCACC
Product: putative PhoH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MADFITRAIELDEQYSQAILGINDQNLKVLENLLDCTIFVRGTRATLSGRDFEVSRGIRVLQELQSMAKRGHAISPDAVK NAVAIVAEDTPHSVNAVLASDIVARRGKVIRAKTLGQKDYVDAIDHNTIVFGLGPAGSGKTYLAMAKAVQALQAKQVNRI ILTRPAVEAGEKLGFLPGTLNEKIDPYLRPLHDALRDMVDPEIIPKLMEAGIVEVAPLAYMRGRTLNDAFVILDEAQNTT PAQMKMFLTRLGFGSKMVVTGDITQVDLPGGQKSGLRLVRDILRGVEGVHFAELGSDDVVRHQLVGRIVDAYDAYEEQLK DK
Sequences:
>Translated_322_residues MADFITRAIELDEQYSQAILGINDQNLKVLENLLDCTIFVRGTRATLSGRDFEVSRGIRVLQELQSMAKRGHAISPDAVK NAVAIVAEDTPHSVNAVLASDIVARRGKVIRAKTLGQKDYVDAIDHNTIVFGLGPAGSGKTYLAMAKAVQALQAKQVNRI ILTRPAVEAGEKLGFLPGTLNEKIDPYLRPLHDALRDMVDPEIIPKLMEAGIVEVAPLAYMRGRTLNDAFVILDEAQNTT PAQMKMFLTRLGFGSKMVVTGDITQVDLPGGQKSGLRLVRDILRGVEGVHFAELGSDDVVRHQLVGRIVDAYDAYEEQLK DK >Mature_321_residues ADFITRAIELDEQYSQAILGINDQNLKVLENLLDCTIFVRGTRATLSGRDFEVSRGIRVLQELQSMAKRGHAISPDAVKN AVAIVAEDTPHSVNAVLASDIVARRGKVIRAKTLGQKDYVDAIDHNTIVFGLGPAGSGKTYLAMAKAVQALQAKQVNRII LTRPAVEAGEKLGFLPGTLNEKIDPYLRPLHDALRDMVDPEIIPKLMEAGIVEVAPLAYMRGRTLNDAFVILDEAQNTTP AQMKMFLTRLGFGSKMVVTGDITQVDLPGGQKSGLRLVRDILRGVEGVHFAELGSDDVVRHQLVGRIVDAYDAYEEQLKD K
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=307, Percent_Identity=51.7915309446254, Blast_Score=274, Evalue=5e-75, Organism=Escherichia coli, GI1787257, Length=206, Percent_Identity=48.0582524271845, Blast_Score=186, Evalue=2e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004087 - InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 35223; Mature: 35092
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADFITRAIELDEQYSQAILGINDQNLKVLENLLDCTIFVRGTRATLSGRDFEVSRGIRV CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEECCEEEECCCCCCHHHHHHH LQELQSMAKRGHAISPDAVKNAVAIVAEDTPHSVNAVLASDIVARRGKVIRAKTLGQKDY HHHHHHHHHCCCCCCCHHHHCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEHHCCCHHH VDAIDHNTIVFGLGPAGSGKTYLAMAKAVQALQAKQVNRIILTRPAVEAGEKLGFLPGTL HHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHCCCCCCCC NEKIDPYLRPLHDALRDMVDPEIIPKLMEAGIVEVAPLAYMRGRTLNDAFVILDEAQNTT CCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCCC PAQMKMFLTRLGFGSKMVVTGDITQVDLPGGQKSGLRLVRDILRGVEGVHFAELGSDDVV HHHHHHHHHHHCCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHCCCHHHH RHQLVGRIVDAYDAYEEQLKDK HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ADFITRAIELDEQYSQAILGINDQNLKVLENLLDCTIFVRGTRATLSGRDFEVSRGIRV HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEECCEEEECCCCCCHHHHHHH LQELQSMAKRGHAISPDAVKNAVAIVAEDTPHSVNAVLASDIVARRGKVIRAKTLGQKDY HHHHHHHHHCCCCCCCHHHHCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEHHCCCHHH VDAIDHNTIVFGLGPAGSGKTYLAMAKAVQALQAKQVNRIILTRPAVEAGEKLGFLPGTL HHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHCCCCCCCC NEKIDPYLRPLHDALRDMVDPEIIPKLMEAGIVEVAPLAYMRGRTLNDAFVILDEAQNTT CCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCCC PAQMKMFLTRLGFGSKMVVTGDITQVDLPGGQKSGLRLVRDILRGVEGVHFAELGSDDVV HHHHHHHHHHHCCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHCCCHHHH RHQLVGRIVDAYDAYEEQLKDK HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]