Click here to switch to the map view.

The map label for this gene is 38233804

Identifier: 38233804

GI number: 38233804

Start: 1216431

End: 1216889

Strand: Direct

Name: 38233804

Synonym: DIP1214

Alternate gene names: NA

Gene position: 1216431-1216889 (Clockwise)

Preceding gene: 38233797

Following gene: 38233806

Centisome position: 48.88

GC content: 49.02

Gene sequence:

>459_bases
TTGCTCAAAAGCTCCAATGTCGAAGGCCTGAGCATCGAGCAGCTGGAAGAATTTAATGAAAAGTTAGAAGGATTCTCTAA
GACACTCGGTCTACGTTTCACACAAATCAATTCTGAAGGTGTGCATGCGGAACTTCCAGTAGCTGCTGAGCATCTTCAAG
TATCAGGTGTAGTCAATGGTGGTGTGTATTCGGCTCTGGCTGAGACCGCTGGATCAATAGCAAGTGTTGTAGCTGCAGAT
GGGGCAATGGCGGTAGGAGTACATTGCGCGACTGATTTCTTGGGAATGGTTCATGCTGGAGTAATCGACGTTTCAGCTGA
AATCATCCATCGTGGCCGTACTACCCACGTGGTCGCCGTTGACATGCACCACAGGGGCAAGCTAGTGGCGCGAGCAACAC
TTCGTACTTTGTTGGTAGCTCCGCAACCAGAAAAGCGCCAGAAAGATAAAATGGCTTAG

Upstream 100 bases:

>100_bases
CAATACCCTGACTGCAGCAATTTTACCCACCCAGCTTGCGGATTGGGCATGGAGAAAGACTAGATTGGGCAACATGAGTA
ACAACGATGAGATTATGGAA

Downstream 100 bases:

>100_bases
TTTCCAATCCAATTCATCTTGCGGAAGTACCACCACATGAGACTCACGGTTAGTACCATGACAAGAATTACAATGTAGTA
GCCGTAGTTGGTAGCTAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MLKSSNVEGLSIEQLEEFNEKLEGFSKTLGLRFTQINSEGVHAELPVAAEHLQVSGVVNGGVYSALAETAGSIASVVAAD
GAMAVGVHCATDFLGMVHAGVIDVSAEIIHRGRTTHVVAVDMHHRGKLVARATLRTLLVAPQPEKRQKDKMA

Sequences:

>Translated_152_residues
MLKSSNVEGLSIEQLEEFNEKLEGFSKTLGLRFTQINSEGVHAELPVAAEHLQVSGVVNGGVYSALAETAGSIASVVAAD
GAMAVGVHCATDFLGMVHAGVIDVSAEIIHRGRTTHVVAVDMHHRGKLVARATLRTLLVAPQPEKRQKDKMA
>Mature_152_residues
MLKSSNVEGLSIEQLEEFNEKLEGFSKTLGLRFTQINSEGVHAELPVAAEHLQVSGVVNGGVYSALAETAGSIASVVAAD
GAMAVGVHCATDFLGMVHAGVIDVSAEIIHRGRTTHVVAVDMHHRGKLVARATLRTLLVAPQPEKRQKDKMA

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003736
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 16106; Mature: 16106

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSSNVEGLSIEQLEEFNEKLEGFSKTLGLRFTQINSEGVHAELPVAAEHLQVSGVVNG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEECCCHHHHEEEEEEECC
GVYSALAETAGSIASVVAADGAMAVGVHCATDFLGMVHAGVIDVSAEIIHRGRTTHVVAV
HHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
DMHHRGKLVARATLRTLLVAPQPEKRQKDKMA
ECCCCCCHHHHHHHHHHHCCCCCCHHHHCCCC
>Mature Secondary Structure
MLKSSNVEGLSIEQLEEFNEKLEGFSKTLGLRFTQINSEGVHAELPVAAEHLQVSGVVNG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEECCCHHHHEEEEEEECC
GVYSALAETAGSIASVVAADGAMAVGVHCATDFLGMVHAGVIDVSAEIIHRGRTTHVVAV
HHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
DMHHRGKLVARATLRTLLVAPQPEKRQKDKMA
ECCCCCCHHHHHHHHHHHCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]