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The map label for this gene is 38233797

Identifier: 38233797

GI number: 38233797

Start: 1207984

End: 1208544

Strand: Direct

Name: 38233797

Synonym: DIP1207

Alternate gene names: NA

Gene position: 1207984-1208544 (Clockwise)

Preceding gene: 38233796

Following gene: 38233804

Centisome position: 48.54

GC content: 47.06

Gene sequence:

>561_bases
ATGGAAGAAATGCGCGACAACGATGTCCCAGTGCAACAAGCACTTTTTGATATGGGACCCGATGAAGAAGTCGGCTATCG
TGTTCCTATTGCATGCCAAGTGGCGGGAATTACGTATCGTCAATTGGATTATTGGGCTCGTACTAAATTAGTGGAACCGA
CAATTCGCACTGCACGAGGATCGGGATCTCAACGGCTGTACTCTTTTAAAGACATTCTGGTGTTGAAGATTGTCAAGCGA
CTTCTGGATACTGGAATTTCCCTGCAAAACATTCGTCTCGCTGTAGACAAATTGCGTAATCGTGGAGTGGATGATTTGGC
GGAAATTACGCTTGTTTCGGATGGTACTACGGTGTATGAGTGCCGTTCGAATGAAGAGGTAATTGATCTCCTCGGCGGTG
GTCAAGGTGTGTTTGGGATCGCAGTACCTGGAATTGTTCGAGAGCTTACCGGAACTATTTCTTCATTCCCTTCAGAAAAG
ATCAGCGATTTTTTGTCCAATAGCCCAGCTGCGGGCGGAATAGATGAGTTAGCAGCACGTCGCCTTCGGAAGACGTCGTA
A

Upstream 100 bases:

>100_bases
CGCGCGTTTTCTATACGTTCGTGCTCTAACCTGTTGCTTAACAGCAATACCTACGGCCCAAGCTCGATGCGAAGCCAGAG
ATCGCAGGGGAGACAACCTG

Downstream 100 bases:

>100_bases
CGCGTTGATACGCAAAAGCGCCCTCGTTTCTATCATTTTCTCTGGCCGATAGAAACGAGGGCGCATCCATTATGGTTACT
TCGTTGTGGAAGCAATAGCT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MEEMRDNDVPVQQALFDMGPDEEVGYRVPIACQVAGITYRQLDYWARTKLVEPTIRTARGSGSQRLYSFKDILVLKIVKR
LLDTGISLQNIRLAVDKLRNRGVDDLAEITLVSDGTTVYECRSNEEVIDLLGGGQGVFGIAVPGIVRELTGTISSFPSEK
ISDFLSNSPAAGGIDELAARRLRKTS

Sequences:

>Translated_186_residues
MEEMRDNDVPVQQALFDMGPDEEVGYRVPIACQVAGITYRQLDYWARTKLVEPTIRTARGSGSQRLYSFKDILVLKIVKR
LLDTGISLQNIRLAVDKLRNRGVDDLAEITLVSDGTTVYECRSNEEVIDLLGGGQGVFGIAVPGIVRELTGTISSFPSEK
ISDFLSNSPAAGGIDELAARRLRKTS
>Mature_186_residues
MEEMRDNDVPVQQALFDMGPDEEVGYRVPIACQVAGITYRQLDYWARTKLVEPTIRTARGSGSQRLYSFKDILVLKIVKR
LLDTGISLQNIRLAVDKLRNRGVDDLAEITLVSDGTTVYECRSNEEVIDLLGGGQGVFGIAVPGIVRELTGTISSFPSEK
ISDFLSNSPAAGGIDELAARRLRKTS

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20448; Mature: 20448

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEMRDNDVPVQQALFDMGPDEEVGYRVPIACQVAGITYRQLDYWARTKLVEPTIRTARG
CCCCCCCCCCHHHHHHCCCCCCCCCEECCEEEEECCCHHHHHHHHHHHHHCCHHHHHHCC
SGSQRLYSFKDILVLKIVKRLLDTGISLQNIRLAVDKLRNRGVDDLAEITLVSDGTTVYE
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHEEEECCCCEEEE
CRSNEEVIDLLGGGQGVFGIAVPGIVRELTGTISSFPSEKISDFLSNSPAAGGIDELAAR
ECCCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHH
RLRKTS
HHHCCC
>Mature Secondary Structure
MEEMRDNDVPVQQALFDMGPDEEVGYRVPIACQVAGITYRQLDYWARTKLVEPTIRTARG
CCCCCCCCCCHHHHHHCCCCCCCCCEECCEEEEECCCHHHHHHHHHHHHHCCHHHHHHCC
SGSQRLYSFKDILVLKIVKRLLDTGISLQNIRLAVDKLRNRGVDDLAEITLVSDGTTVYE
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHEEEECCCCEEEE
CRSNEEVIDLLGGGQGVFGIAVPGIVRELTGTISSFPSEKISDFLSNSPAAGGIDELAAR
ECCCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHH
RLRKTS
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]