| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233806
Identifier: 38233806
GI number: 38233806
Start: 1217993
End: 1218622
Strand: Direct
Name: 38233806
Synonym: DIP1216
Alternate gene names: NA
Gene position: 1217993-1218622 (Clockwise)
Preceding gene: 38233804
Following gene: 38233808
Centisome position: 48.94
GC content: 45.24
Gene sequence:
>630_bases ATGCAGACCTCTTTTTGTGTTTTAGTGTCTATTATTGAACGTATGCCAACTTGGAACGACATCAAAGTACGAAACCCCCA GCATTCACATAACTATGCAAAACGCTGGGAAAATCTCGAAGCTGAAGGTAATGATATCAACGGCGAAGCTCGGCTTATCG ACGCCCTCGTTCAGCGTGGATCGAAAATCCTTGATGCAGGATGTGGGCAAGGACGAGTCGGTGGATACTTATCGGCACGA GGGCATATCGTAACTGGCATTGATATCGATGATTATTTGATTTCTGAGGCGGAAAAGAAATTCCCAAGTGCAACGTGGCA TGTAGGTGACCTAGGGAGCGAATCGATTCCGGATCAGGGATTTGATATCGCTGTATGTGCTGGGAACGTTATTACGTTTA TAGAGCCGGATAAACAAGAAGCCGCTTTAGCGCATATTTTTGAAGCTTTGCGACCCAATGGCCGGTGCATTATTGGATTT GGTGCTGGCCGAGGATATGTGTTTCCACAATTTTTCGAAGATGCCCGTAACGTAGGATTTGTTATTGAAAATAACTTCGA GTCTTGGGGCCTAAATCCACTGACCAACCGGTCTCAATTCCTCGTAGCCTTTTTGCGTAAACCTGAATAA
Upstream 100 bases:
>100_bases CGTCAACACCAAGTTGCTTACGCTCAGCGCTTATGGGGTGCGTGCGGCGATTTCGCGGGGTGAATGCTGGTAGCTGGCGA TTCTTTTCGTTCATAGCTTT
Downstream 100 bases:
>100_bases GTGAGAAAACACCAGCGGATTTGAAGCATCGAAACGATCTTGTTCGCTGGTGTTTTTAAACTATTAGCGGGAATAATTAC TTCTTTTCGGCGGTATCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase; Methyltransferase Family Protein; LmbE Family Protein; MCP Methyltransferase CheR-Type; Menaquinone Biosynthesis Methyltransferase; Sam Dependent Methyltransferase
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MQTSFCVLVSIIERMPTWNDIKVRNPQHSHNYAKRWENLEAEGNDINGEARLIDALVQRGSKILDAGCGQGRVGGYLSAR GHIVTGIDIDDYLISEAEKKFPSATWHVGDLGSESIPDQGFDIAVCAGNVITFIEPDKQEAALAHIFEALRPNGRCIIGF GAGRGYVFPQFFEDARNVGFVIENNFESWGLNPLTNRSQFLVAFLRKPE
Sequences:
>Translated_209_residues MQTSFCVLVSIIERMPTWNDIKVRNPQHSHNYAKRWENLEAEGNDINGEARLIDALVQRGSKILDAGCGQGRVGGYLSAR GHIVTGIDIDDYLISEAEKKFPSATWHVGDLGSESIPDQGFDIAVCAGNVITFIEPDKQEAALAHIFEALRPNGRCIIGF GAGRGYVFPQFFEDARNVGFVIENNFESWGLNPLTNRSQFLVAFLRKPE >Mature_209_residues MQTSFCVLVSIIERMPTWNDIKVRNPQHSHNYAKRWENLEAEGNDINGEARLIDALVQRGSKILDAGCGQGRVGGYLSAR GHIVTGIDIDDYLISEAEKKFPSATWHVGDLGSESIPDQGFDIAVCAGNVITFIEPDKQEAALAHIFEALRPNGRCIIGF GAGRGYVFPQFFEDARNVGFVIENNFESWGLNPLTNRSQFLVAFLRKPE
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23198; Mature: 23198
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTSFCVLVSIIERMPTWNDIKVRNPQHSHNYAKRWENLEAEGNDINGEARLIDALVQRG CCCHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC SKILDAGCGQGRVGGYLSARGHIVTGIDIDDYLISEAEKKFPSATWHVGDLGSESIPDQG CCEECCCCCCCCCCCEEECCCCEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC FDIAVCAGNVITFIEPDKQEAALAHIFEALRPNGRCIIGFGAGRGYVFPQFFEDARNVGF CEEEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCCE VIENNFESWGLNPLTNRSQFLVAFLRKPE EEECCCCCCCCCCCCCCHHHHHHEECCCC >Mature Secondary Structure MQTSFCVLVSIIERMPTWNDIKVRNPQHSHNYAKRWENLEAEGNDINGEARLIDALVQRG CCCHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC SKILDAGCGQGRVGGYLSARGHIVTGIDIDDYLISEAEKKFPSATWHVGDLGSESIPDQG CCEECCCCCCCCCCCEEECCCCEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC FDIAVCAGNVITFIEPDKQEAALAHIFEALRPNGRCIIGFGAGRGYVFPQFFEDARNVGF CEEEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCCE VIENNFESWGLNPLTNRSQFLVAFLRKPE EEECCCCCCCCCCCCCCHHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA