| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233796
Identifier: 38233796
GI number: 38233796
Start: 1207245
End: 1207832
Strand: Direct
Name: 38233796
Synonym: DIP1206
Alternate gene names: NA
Gene position: 1207245-1207832 (Clockwise)
Preceding gene: 38233795
Following gene: 38233797
Centisome position: 48.51
GC content: 43.71
Gene sequence:
>588_bases ATGGCTTTTCGCCAAGTTGAATATAAAGGCGTCCATTTTTTCCCACCAGAAGATGATGCTTGTTTAGTTTTCTCCTGGTC AGAACGGCGCCGAATTCTTCCCATTTGGGTTGATGTTGAAGAAGGCATCAGACTTTCAGAGCGAAGTGAGCATGGAGCTC CTCGTAGGCCGTTGGCACACGATGTGCTCATTGAAACCATTAACCGTATGGGGGGTAGCGTCGAGGCAATCCGTGTAGTG AGTTACTACGAAGGTGTCTTTATCTGTTCATTAGTGCTTGATAATCAAGAAGAAATTGATTGTCGACCAAGTGATGCGAT TGCGATTTCAGAATTGATTGGCGTTGCAATCTCTGTAGATGATGAAGTCCTTAACCAAGCTAGCGTTTTCGTTCCTGAAT CCGATATGGAAGCCTATTTAGGATTTGTTTTTCCTAAAGATGTTCATGATGAACTAGATTCGGATCCCACCAAATCTCAA GCAGATGCAGATTTTTCCAACCTTATGGAAAGTCTTGGTGTAAGTGAGCAGGATCTTTTGGGATCGGATGACTTTGGGGA CGATTCTTTTGATCTGGGGGATAGCTAA
Upstream 100 bases:
>100_bases CAGCAACTTAGCGCATTGGTAGTATCATTGAATGCTACGATGCTGCGTTCGATGTTGCGCGATGAGCTGAACCGTTAAAC TTTTGGGGAGAAATTAATTT
Downstream 100 bases:
>100_bases AGCTTCGGCAAATGTCTAAACTTCAACTTGAGGTTGAGGTTTTGGGCGTGTCGCGCGTTTTCTATACGTTCGTGCTCTAA CCTGTTGCTTAACAGCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MAFRQVEYKGVHFFPPEDDACLVFSWSERRRILPIWVDVEEGIRLSERSEHGAPRRPLAHDVLIETINRMGGSVEAIRVV SYYEGVFICSLVLDNQEEIDCRPSDAIAISELIGVAISVDDEVLNQASVFVPESDMEAYLGFVFPKDVHDELDSDPTKSQ ADADFSNLMESLGVSEQDLLGSDDFGDDSFDLGDS
Sequences:
>Translated_195_residues MAFRQVEYKGVHFFPPEDDACLVFSWSERRRILPIWVDVEEGIRLSERSEHGAPRRPLAHDVLIETINRMGGSVEAIRVV SYYEGVFICSLVLDNQEEIDCRPSDAIAISELIGVAISVDDEVLNQASVFVPESDMEAYLGFVFPKDVHDELDSDPTKSQ ADADFSNLMESLGVSEQDLLGSDDFGDDSFDLGDS >Mature_194_residues AFRQVEYKGVHFFPPEDDACLVFSWSERRRILPIWVDVEEGIRLSERSEHGAPRRPLAHDVLIETINRMGGSVEAIRVVS YYEGVFICSLVLDNQEEIDCRPSDAIAISELIGVAISVDDEVLNQASVFVPESDMEAYLGFVFPKDVHDELDSDPTKSQA DADFSNLMESLGVSEQDLLGSDDFGDDSFDLGDS
Specific function: Unknown
COG id: COG1259
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003729 [H]
Pfam domain/function: PF02577 DUF151 [H]
EC number: NA
Molecular weight: Translated: 21752; Mature: 21621
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFRQVEYKGVHFFPPEDDACLVFSWSERRRILPIWVDVEEGIRLSERSEHGAPRRPLAH CCCCCCEECCEEECCCCCCEEEEEEECCCCEEEEEEEEHHHCCCCCCCCCCCCCCCCHHH DVLIETINRMGGSVEAIRVVSYYEGVFICSLVLDNQEEIDCRPSDAIAISELIGVAISVD HHHHHHHHHCCCCCCEEHHHHHHCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHEEEECC DEVLNQASVFVPESDMEAYLGFVFPKDVHDELDSDPTKSQADADFSNLMESLGVSEQDLL HHHHHHHEEECCCCHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHCC GSDDFGDDSFDLGDS CCCCCCCCCCCCCCC >Mature Secondary Structure AFRQVEYKGVHFFPPEDDACLVFSWSERRRILPIWVDVEEGIRLSERSEHGAPRRPLAH CCCCCEECCEEECCCCCCEEEEEEECCCCEEEEEEEEHHHCCCCCCCCCCCCCCCCHHH DVLIETINRMGGSVEAIRVVSYYEGVFICSLVLDNQEEIDCRPSDAIAISELIGVAISVD HHHHHHHHHCCCCCCEEHHHHHHCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHEEEECC DEVLNQASVFVPESDMEAYLGFVFPKDVHDELDSDPTKSQADADFSNLMESLGVSEQDLL HHHHHHHEEECCCCHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHCC GSDDFGDDSFDLGDS CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]