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The map label for this gene is 38233795

Identifier: 38233795

GI number: 38233795

Start: 1206545

End: 1207222

Strand: Direct

Name: 38233795

Synonym: DIP1205

Alternate gene names: NA

Gene position: 1206545-1207222 (Clockwise)

Preceding gene: 38233794

Following gene: 38233796

Centisome position: 48.48

GC content: 50.44

Gene sequence:

>678_bases
ATGTCGATTGGTGTCGTGCTCGCAAAAATCACTGCGGAATTTCCTGATGTCACGGTGTCGAAAATTCGTTACCTCGAGTC
CGAAGGGCTAATTACTCCCCAGCGCACTTCAACCGGATATCGTCGATTTACCCAAGATGATGTCGAACGGTTGCGCTACA
TCCTCGTTACACAGCGGGATAACTATTTGCCGCTTAAGGTTATTAGGGAGCAACTTGAGGCAATGGATTCTGGCGCGGTC
ACGCCTATTTCGCGTGGCAGTGACAATGCCCCTCTCATTAGCCCAGAGTCATTCCGCACTTCGGTGGTCACTAGGCTTTC
CGATAGCGATGTTGCGGCGAGAGCCCAAGTTTCCGAATCGGAAGTAAGTGAACTTGCCGAAGCGGGATTGATTAGACCGG
ATTCTTCAGGTTTCTTTACCGCGGATGATGTACAAGTGGTATCGGTCGCGGTGCAGCTGAAGGAATTTGGTTTCGATGTT
AGGCACCTCAAGTCATTGCGTAATCTTGCTTCGCGCCATGCCGATTTAATTTCTCGCGCTACAACGCCTGTCGCTCGTTC
TCAAAGTGAGAGCGCGCGTCAACGTGCAGAAGAAATGTCACAGCAACTTAGCGCATTGGTAGTATCATTGAATGCTACGA
TGCTGCGTTCGATGTTGCGCGATGAGCTGAACCGTTAA

Upstream 100 bases:

>100_bases
CAAAATTATGAGTGCACTTCCGCAACGAAATGATTCAGGTTCGGCTGGTTCTTACCAGCCTAGGCCGCAGTCATCGTCGC
TGTCTTCGTCGAAAAAGACG

Downstream 100 bases:

>100_bases
ACTTTTGGGGAGAAATTAATTTATGGCTTTTCGCCAAGTTGAATATAAAGGCGTCCATTTTTTCCCACCAGAAGATGATG
CTTGTTTAGTTTTCTCCTGG

Product: merR family regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSIGVVLAKITAEFPDVTVSKIRYLESEGLITPQRTSTGYRRFTQDDVERLRYILVTQRDNYLPLKVIREQLEAMDSGAV
TPISRGSDNAPLISPESFRTSVVTRLSDSDVAARAQVSESEVSELAEAGLIRPDSSGFFTADDVQVVSVAVQLKEFGFDV
RHLKSLRNLASRHADLISRATTPVARSQSESARQRAEEMSQQLSALVVSLNATMLRSMLRDELNR

Sequences:

>Translated_225_residues
MSIGVVLAKITAEFPDVTVSKIRYLESEGLITPQRTSTGYRRFTQDDVERLRYILVTQRDNYLPLKVIREQLEAMDSGAV
TPISRGSDNAPLISPESFRTSVVTRLSDSDVAARAQVSESEVSELAEAGLIRPDSSGFFTADDVQVVSVAVQLKEFGFDV
RHLKSLRNLASRHADLISRATTPVARSQSESARQRAEEMSQQLSALVVSLNATMLRSMLRDELNR
>Mature_224_residues
SIGVVLAKITAEFPDVTVSKIRYLESEGLITPQRTSTGYRRFTQDDVERLRYILVTQRDNYLPLKVIREQLEAMDSGAVT
PISRGSDNAPLISPESFRTSVVTRLSDSDVAARAQVSESEVSELAEAGLIRPDSSGFFTADDVQVVSVAVQLKEFGFDVR
HLKSLRNLASRHADLISRATTPVARSQSESARQRAEEMSQQLSALVVSLNATMLRSMLRDELNR

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 24946; Mature: 24814

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIGVVLAKITAEFPDVTVSKIRYLESEGLITPQRTSTGYRRFTQDDVERLRYILVTQRD
CCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHEECCC
NYLPLKVIREQLEAMDSGAVTPISRGSDNAPLISPESFRTSVVTRLSDSDVAARAQVSES
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCHH
EVSELAEAGLIRPDSSGFFTADDVQVVSVAVQLKEFGFDVRHLKSLRNLASRHADLISRA
HHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TTPVARSQSESARQRAEEMSQQLSALVVSLNATMLRSMLRDELNR
CCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIGVVLAKITAEFPDVTVSKIRYLESEGLITPQRTSTGYRRFTQDDVERLRYILVTQRD
CCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHEECCC
NYLPLKVIREQLEAMDSGAVTPISRGSDNAPLISPESFRTSVVTRLSDSDVAARAQVSES
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCHH
EVSELAEAGLIRPDSSGFFTADDVQVVSVAVQLKEFGFDVRHLKSLRNLASRHADLISRA
HHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TTPVARSQSESARQRAEEMSQQLSALVVSLNATMLRSMLRDELNR
CCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]