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The map label for this gene is pheT

Identifier: 38233756

GI number: 38233756

Start: 1156643

End: 1159153

Strand: Direct

Name: pheT

Synonym: DIP1166

Alternate gene names: 38233756

Gene position: 1156643-1159153 (Clockwise)

Preceding gene: 38233755

Following gene: 38233757

Centisome position: 46.48

GC content: 49.66

Gene sequence:

>2511_bases
ATGCTCATTTCACAAAACTGGGTCACCGAATTGTTAGGTCGATCGAACCCAGATTGGAAAGTTAGCCCAGCTGAGCTGGA
TTCGGGATATGTCCGAGTTGGATTTGAAACCGAGGGTTACAGCGCAATCCCTGAAACGACTGGTCCACTCGTCATCGGTC
GAGTTGAAACAATTGAAGAGCTAGAGGGCTTTAAAAAGCCAATTCGTCACTGCTTCGTCAATGTTGGAGATGCGAATGGC
ACTGGAGAGCTTCAGTCAATTGTATGCGGGGCGCGTAATTTCCAAGAAGGTTCTTATGTAGTAGTTTCACTTCCGGGTGC
TGTTTTGCCTGGTAATTTCGCAATTTCGGCACGTGAGACATATGGACGCATGTCAGCTGGCATGATTTGCTCGGCAGCGG
AATTGGGGCTATCTGACAAGCAAAATTCTGGAATCATAACGCTTCCGAATGAAATCGCCGAACCAGGAACTGATGCACGA
AGCATTGTTGGTTTGGACGATACTGTTTTTGATGTCAATATCACGCCAGATCGTGGATATGCATTGTCTGCACGTGGATT
AACTCGAGAACTGGCTTCGGCTTTTAATCTAAAGTTCGTTGATCCTGCAGTAGATCTTAACGTGGCTGGCGTCGATACTT
CGGATGTTCCAGAATCTTCAGGTGAGTTAATTAAGGTTGATCTGCGACCAGAAACGCAGGCACGTCGTTTCGGAGTTCGT
AAAGTTTCTGGAATCGATCCAAAGGCTCCCACACCATTTTGGATGCAGCGTGAACTCATGTTGTCAGGCCAGCGTTGCGT
GAATGCCGCAACTGACGTGACCAATTTCGTCATGTTGCTTTTGGGGCAGCCTATGCATGCCTTTGATGCCAACTTAATTA
AGGGCGGATTGGTTGTACGTAATGCCCTAGAAGGAGAGTCTTTTGAGACTCTTGATCATGTAAAGCGTACTTTGTCTGCA
GAAGACGTTGTTATCTCCGATGATACTGGTATTCAATCCTTGGCTGGCGTTATGGGCGGAACTACTTCAGAAATTTCAGA
CGAAACAACTGATGTATTTTTTGAGGCTGCCAATTGGCATCCAATTACTACAGCACGTACGTCGCGTCGCCATAAGCTCA
GCACCGAGGCGTCACGACGCTTCGAGCGTGGCGTTGATCCAGAAATTATTGAGGTAGCTCTGGACGTTGCCTGCGCCTTA
CTCGTCAGTATTGCTGGTGGTTCTGTGGAATCCGCCCGCACTTTGATTGGATCTGCGCCAAGCATGCCTCAAATTCGTAT
GAAGACGTCTCGCCCAGCCGAGTTGGCTGGAGTAGCTTACTCGGACGCTACTGTGATTGCGCGGTTGAAAGAAGTCGGAT
GTGCTGTCGAAGTCGATGGTGATGATCTTCTTGTCACGCCTCCTACGTGGCGTCCAGATATGACTATGTCTGCTGATTTG
GTTGAAGAAGTTCTTCGTCTCGAAGGACTAGAGGACATTCCAACAATCGTTCCGCTTGCACCTGTGGGATCAGGGCTCTC
GCCTGCGCAATTGCGTCGTCGTGCGATCGGGCATGCACTTGCATACAGTGGCTATGCGGAAATCCTACCTACGCCTTTTA
TTCGAAACGATACGTTCGATGTGTGGGGGCTTGCAGCAGACGATGAGCGTCGAAGCGTCGTCACGGTACAAAACCCTCTC
GATGCTGAGTACGGAGTTCTCGCGACTACATTGCTGCCTTCTATGCTCGAGGCTGTTACCCGCAATGTTTCTCGAGGGCA
AACTTCTGTCAATCTTTTCGGTCTTCAGCAGGTGTCCTTCAAACGTGGCTCAGGTATTTCGCCAATGCTCGATGTCCGTC
AGCGTCCTAGCGATAATGAAGTTGCTGAGTTGCTAAACTCCTTGCCAGTACAACCACTCCATGTGGCAACTGTTGGCGCT
GGTTTTATGGAGTTGGAGGGACCATGGGGTCATGGTCGAACGTATTCGTTTGCTGATGCTATCGAGTCGGCTCGAGTTGT
TGCCCGTGCAGCAGGCGTTGAGCTTAACGTCGAAAATGTAGAGATGCTACCTTGGCATCCTGGGCGCTGTGCTGCATTAA
AAGCTGGTGACCACATTGTTGGATATGCTGGCGAATTGCATCCTCAGATTGTTGAAGCCTTGAATCTGCCAGCACGTACG
TGCGCCATGGAACTCGATGTATCTGCGCTGCCATTGAAGGAATCATTTCCAGCGCCGGTTCTATCAGCGTTTCCTGTATT
ACATCAAGATCTAGCACTTGTCGTAGACGAGTCCGTACCGGCAGAATCTGTACGTAAAGTTATCGAGGATGCAGCAGGAG
AGCTACTGGAAAAGGTTGAGCTTTTCGACGTTTACCGTTCTGAGGCGCTAGGTGCAGAGAAAAAATCTCTCGCTTTTTCT
CTTGAATTCCGTGCTCAGGATCGCACTCTGACAGACGATGAATGTTCTGAAGGTAGGCTTGCAGCTGCGGGTCGGGCTGC
TGAGCTATTCGGTGCGACGATGCGCGCATAA

Upstream 100 bases:

>100_bases
TGCGTGACATGGTGGAAGGCGATGTTCGTTTCACTCTTCCATTTGGTGTTCAGGCGTAGAGCAATTCGAGTATCCAAAGA
ATAAACAGGAGTTAGATTAC

Downstream 100 bases:

>100_bases
AATAGCAATGGTTCTCCAATGAGAATCCCCATGTCAATGAAGTAATTTTTCACTGGCACGGGGATTTTATTATATTAATG
GCGAATACTTTACATTTGAA

Product: phenylalanyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS

Number of amino acids: Translated: 836; Mature: 836

Protein sequence:

>836_residues
MLISQNWVTELLGRSNPDWKVSPAELDSGYVRVGFETEGYSAIPETTGPLVIGRVETIEELEGFKKPIRHCFVNVGDANG
TGELQSIVCGARNFQEGSYVVVSLPGAVLPGNFAISARETYGRMSAGMICSAAELGLSDKQNSGIITLPNEIAEPGTDAR
SIVGLDDTVFDVNITPDRGYALSARGLTRELASAFNLKFVDPAVDLNVAGVDTSDVPESSGELIKVDLRPETQARRFGVR
KVSGIDPKAPTPFWMQRELMLSGQRCVNAATDVTNFVMLLLGQPMHAFDANLIKGGLVVRNALEGESFETLDHVKRTLSA
EDVVISDDTGIQSLAGVMGGTTSEISDETTDVFFEAANWHPITTARTSRRHKLSTEASRRFERGVDPEIIEVALDVACAL
LVSIAGGSVESARTLIGSAPSMPQIRMKTSRPAELAGVAYSDATVIARLKEVGCAVEVDGDDLLVTPPTWRPDMTMSADL
VEEVLRLEGLEDIPTIVPLAPVGSGLSPAQLRRRAIGHALAYSGYAEILPTPFIRNDTFDVWGLAADDERRSVVTVQNPL
DAEYGVLATTLLPSMLEAVTRNVSRGQTSVNLFGLQQVSFKRGSGISPMLDVRQRPSDNEVAELLNSLPVQPLHVATVGA
GFMELEGPWGHGRTYSFADAIESARVVARAAGVELNVENVEMLPWHPGRCAALKAGDHIVGYAGELHPQIVEALNLPART
CAMELDVSALPLKESFPAPVLSAFPVLHQDLALVVDESVPAESVRKVIEDAAGELLEKVELFDVYRSEALGAEKKSLAFS
LEFRAQDRTLTDDECSEGRLAAAGRAAELFGATMRA

Sequences:

>Translated_836_residues
MLISQNWVTELLGRSNPDWKVSPAELDSGYVRVGFETEGYSAIPETTGPLVIGRVETIEELEGFKKPIRHCFVNVGDANG
TGELQSIVCGARNFQEGSYVVVSLPGAVLPGNFAISARETYGRMSAGMICSAAELGLSDKQNSGIITLPNEIAEPGTDAR
SIVGLDDTVFDVNITPDRGYALSARGLTRELASAFNLKFVDPAVDLNVAGVDTSDVPESSGELIKVDLRPETQARRFGVR
KVSGIDPKAPTPFWMQRELMLSGQRCVNAATDVTNFVMLLLGQPMHAFDANLIKGGLVVRNALEGESFETLDHVKRTLSA
EDVVISDDTGIQSLAGVMGGTTSEISDETTDVFFEAANWHPITTARTSRRHKLSTEASRRFERGVDPEIIEVALDVACAL
LVSIAGGSVESARTLIGSAPSMPQIRMKTSRPAELAGVAYSDATVIARLKEVGCAVEVDGDDLLVTPPTWRPDMTMSADL
VEEVLRLEGLEDIPTIVPLAPVGSGLSPAQLRRRAIGHALAYSGYAEILPTPFIRNDTFDVWGLAADDERRSVVTVQNPL
DAEYGVLATTLLPSMLEAVTRNVSRGQTSVNLFGLQQVSFKRGSGISPMLDVRQRPSDNEVAELLNSLPVQPLHVATVGA
GFMELEGPWGHGRTYSFADAIESARVVARAAGVELNVENVEMLPWHPGRCAALKAGDHIVGYAGELHPQIVEALNLPART
CAMELDVSALPLKESFPAPVLSAFPVLHQDLALVVDESVPAESVRKVIEDAAGELLEKVELFDVYRSEALGAEKKSLAFS
LEFRAQDRTLTDDECSEGRLAAAGRAAELFGATMRA
>Mature_836_residues
MLISQNWVTELLGRSNPDWKVSPAELDSGYVRVGFETEGYSAIPETTGPLVIGRVETIEELEGFKKPIRHCFVNVGDANG
TGELQSIVCGARNFQEGSYVVVSLPGAVLPGNFAISARETYGRMSAGMICSAAELGLSDKQNSGIITLPNEIAEPGTDAR
SIVGLDDTVFDVNITPDRGYALSARGLTRELASAFNLKFVDPAVDLNVAGVDTSDVPESSGELIKVDLRPETQARRFGVR
KVSGIDPKAPTPFWMQRELMLSGQRCVNAATDVTNFVMLLLGQPMHAFDANLIKGGLVVRNALEGESFETLDHVKRTLSA
EDVVISDDTGIQSLAGVMGGTTSEISDETTDVFFEAANWHPITTARTSRRHKLSTEASRRFERGVDPEIIEVALDVACAL
LVSIAGGSVESARTLIGSAPSMPQIRMKTSRPAELAGVAYSDATVIARLKEVGCAVEVDGDDLLVTPPTWRPDMTMSADL
VEEVLRLEGLEDIPTIVPLAPVGSGLSPAQLRRRAIGHALAYSGYAEILPTPFIRNDTFDVWGLAADDERRSVVTVQNPL
DAEYGVLATTLLPSMLEAVTRNVSRGQTSVNLFGLQQVSFKRGSGISPMLDVRQRPSDNEVAELLNSLPVQPLHVATVGA
GFMELEGPWGHGRTYSFADAIESARVVARAAGVELNVENVEMLPWHPGRCAALKAGDHIVGYAGELHPQIVEALNLPART
CAMELDVSALPLKESFPAPVLSAFPVLHQDLALVVDESVPAESVRKVIEDAAGELLEKVELFDVYRSEALGAEKKSLAFS
LEFRAQDRTLTDDECSEGRLAAAGRAAELFGATMRA

Specific function: Unknown

COG id: COG0072

COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tRNA-binding domain

Homologues:

Organism=Escherichia coli, GI1788006, Length=766, Percent_Identity=33.6814621409922, Blast_Score=350, Evalue=2e-97,

Paralogues:

None

Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SYFB_CORDI (Q6NHH1)

Other databases:

- EMBL:   BX248357
- RefSeq:   NP_939523.1
- ProteinModelPortal:   Q6NHH1
- SMR:   Q6NHH1
- GeneID:   2648566
- GenomeReviews:   BX248353_GR
- KEGG:   cdi:DIP1166
- NMPDR:   fig|257309.1.peg.1114
- HOGENOM:   HBG399638
- OMA:   ADKLRVC
- ProtClustDB:   PRK00629
- BioCyc:   CDIP257309:DIP1166-MONOMER
- BRENDA:   6.1.1.20
- GO:   GO:0005737
- HAMAP:   MF_00283
- InterPro:   IPR005146
- InterPro:   IPR005147
- InterPro:   IPR009061
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004532
- InterPro:   IPR020825
- InterPro:   IPR005121
- InterPro:   IPR002547
- Gene3D:   G3DSA:3.50.40.10
- Gene3D:   G3DSA:3.30.56.20
- Gene3D:   G3DSA:3.30.70.380
- Gene3D:   G3DSA:2.40.50.140
- SMART:   SM00873
- SMART:   SM00874
- SMART:   SM00896
- TIGRFAMs:   TIGR00472

Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind; SSF56037 B3_4; SSF54991 Fdx_AntiC_bd; SSF50249 Nucleic_acid_OB; SSF46955 Putativ_DNA_bind

EC number: =6.1.1.20

Molecular weight: Translated: 89784; Mature: 89784

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS51483 B5; PS51447 FDX_ACB; PS50886 TRBD; PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLISQNWVTELLGRSNPDWKVSPAELDSGYVRVGFETEGYSAIPETTGPLVIGRVETIEE
CCCCHHHHHHHHCCCCCCCEECHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEHHHHHHH
LEGFKKPIRHCFVNVGDANGTGELQSIVCGARNFQEGSYVVVSLPGAVLPGNFAISARET
HHHHHHHHHHHEEECCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEEHHH
YGRMSAGMICSAAELGLSDKQNSGIITLPNEIAEPGTDARSIVGLDDTVFDVNITPDRGY
HCCHHCCCEEHHHHCCCCCCCCCCEEECCHHHCCCCCCCCEEECCCCEEEEEEECCCCCC
ALSARGLTRELASAFNLKFVDPAVDLNVAGVDTSDVPESSGELIKVDLRPETQARRFGVR
EEECCHHHHHHHHHHCCEEECCCCCEEEECCCCCCCCCCCCCEEEEECCCCHHHHHCCCH
KVSGIDPKAPTPFWMQRELMLSGQRCVNAATDVTNFVMLLLGQPMHAFDANLIKGGLVVR
HCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHEE
NALEGESFETLDHVKRTLSAEDVVISDDTGIQSLAGVMGGTTSEISDETTDVFFEAANWH
CCCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCHHCCCCCCEEEEECCCCC
PITTARTSRRHKLSTEASRRFERGVDPEIIEVALDVACALLVSIAGGSVESARTLIGSAP
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
SMPQIRMKTSRPAELAGVAYSDATVIARLKEVGCAVEVDGDDLLVTPPTWRPDMTMSADL
CCCCEEECCCCCCHHHEEEECCHHHHHHHHHCCEEEEECCCCEEEECCCCCCCCCCCHHH
VEEVLRLEGLEDIPTIVPLAPVGSGLSPAQLRRRAIGHALAYSGYAEILPTPFIRNDTFD
HHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCC
VWGLAADDERRSVVTVQNPLDAEYGVLATTLLPSMLEAVTRNVSRGQTSVNLFGLQQVSF
EEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHH
KRGSGISPMLDVRQRPSDNEVAELLNSLPVQPLHVATVGAGFMELEGPWGHGRTYSFADA
CCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCHHHHH
IESARVVARAAGVELNVENVEMLPWHPGRCAALKAGDHIVGYAGELHPQIVEALNLPART
HHHHHHHHHHCCCEEECCCEEEECCCCCCEEEEECCCEEEECCCCCCHHHHHHHCCCHHH
CAMELDVSALPLKESFPAPVLSAFPVLHQDLALVVDESVPAESVRKVIEDAAGELLEKVE
HEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHH
LFDVYRSEALGAEKKSLAFSLEFRAQDRTLTDDECSEGRLAAAGRAAELFGATMRA
HHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEECCCCHHHHHHHHHCC
>Mature Secondary Structure
MLISQNWVTELLGRSNPDWKVSPAELDSGYVRVGFETEGYSAIPETTGPLVIGRVETIEE
CCCCHHHHHHHHCCCCCCCEECHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEHHHHHHH
LEGFKKPIRHCFVNVGDANGTGELQSIVCGARNFQEGSYVVVSLPGAVLPGNFAISARET
HHHHHHHHHHHEEECCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEEHHH
YGRMSAGMICSAAELGLSDKQNSGIITLPNEIAEPGTDARSIVGLDDTVFDVNITPDRGY
HCCHHCCCEEHHHHCCCCCCCCCCEEECCHHHCCCCCCCCEEECCCCEEEEEEECCCCCC
ALSARGLTRELASAFNLKFVDPAVDLNVAGVDTSDVPESSGELIKVDLRPETQARRFGVR
EEECCHHHHHHHHHHCCEEECCCCCEEEECCCCCCCCCCCCCEEEEECCCCHHHHHCCCH
KVSGIDPKAPTPFWMQRELMLSGQRCVNAATDVTNFVMLLLGQPMHAFDANLIKGGLVVR
HCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHEE
NALEGESFETLDHVKRTLSAEDVVISDDTGIQSLAGVMGGTTSEISDETTDVFFEAANWH
CCCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCHHCCCCCCEEEEECCCCC
PITTARTSRRHKLSTEASRRFERGVDPEIIEVALDVACALLVSIAGGSVESARTLIGSAP
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
SMPQIRMKTSRPAELAGVAYSDATVIARLKEVGCAVEVDGDDLLVTPPTWRPDMTMSADL
CCCCEEECCCCCCHHHEEEECCHHHHHHHHHCCEEEEECCCCEEEECCCCCCCCCCCHHH
VEEVLRLEGLEDIPTIVPLAPVGSGLSPAQLRRRAIGHALAYSGYAEILPTPFIRNDTFD
HHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCC
VWGLAADDERRSVVTVQNPLDAEYGVLATTLLPSMLEAVTRNVSRGQTSVNLFGLQQVSF
EEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHH
KRGSGISPMLDVRQRPSDNEVAELLNSLPVQPLHVATVGAGFMELEGPWGHGRTYSFADA
CCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCHHHHH
IESARVVARAAGVELNVENVEMLPWHPGRCAALKAGDHIVGYAGELHPQIVEALNLPART
HHHHHHHHHHCCCEEECCCEEEECCCCCCEEEEECCCEEEECCCCCCHHHHHHHCCCHHH
CAMELDVSALPLKESFPAPVLSAFPVLHQDLALVVDESVPAESVRKVIEDAAGELLEKVE
HEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHH
LFDVYRSEALGAEKKSLAFSLEFRAQDRTLTDDECSEGRLAAAGRAAELFGATMRA
HHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 14602910