Definition Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome.
Accession NC_002935
Length 2,488,635

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The map label for this gene is gabD [H]

Identifier: 38233430

GI number: 38233430

Start: 809708

End: 811192

Strand: Direct

Name: gabD [H]

Synonym: DIP0833

Alternate gene names: 38233430

Gene position: 809708-811192 (Clockwise)

Preceding gene: 38233428

Following gene: 38233432

Centisome position: 32.54

GC content: 56.3

Gene sequence:

>1485_bases
ATGACGCATACAACACAAACACTCGATGATCGCATCCACGAACTACTGCAACGAATCCCCACGGAGCTTTTTATCGCAGG
GCAATTCCAACCTGCCCACAACGGTGCAACACTGAGCGTGACCAATCCCTCTGACGGCTCAGAACTTGCCACAGTGGCGT
CGGCAAGCGAAAAAGAAGCACGCGCAGCCCTCGACGCCGCTGAAAAAGCCCAACCCACATGGGCCGCGACACCCGCACGT
GAACGCTCAGAAATCCTTCGTCGGGCCTACGACCTAGTCATCGAGCACAAAGACGACCTTGCCATGATTCAGTCCCTAGA
ACTAGGACGCGCCCTGCCAGACTCCGAAGCAGAGGTAACCTACGCCGCTGAATTTTTCCGGTGGTTCGCAGAAGAGGCAG
TAAGGATTCGCGGCGACTACCGCCACAATCCCACCGGAAATGCCCGCATTATTACCCACCAGCAGCCGGTAGGCCCCTGC
CTTGCCATCACCCCATGGAACTTTCCGCTTGCAATGGGCGCACGCAAACTCGCCCCAGCCCTAGCAGCAGGCTGCACCAT
GATCCTTAAACCAGCATCAAAAACCCCACTGACCATGCTGTACCTAGCACAACTGTTGGCAGAAGCAGGAGTTCCCCACG
GTGTTGTCTCCGTGCTGCCGACCGCAAACGCCAGCGTGGTATCCGACCTATTGCACGATGCGCGCATCCGAAAACTCACC
TTTACCGGCTCGACCGCAGTAGGACAAAAACTCGCCGCGATGGCCGCCGAACACAGCGCCGCCGTATCCCTTGAACTTGG
AGGGAATGCCCCCTACATCGTTTTGGACGACGCCGACATCGACACCGCAGCGCAGGCGGTCGCTGTAGCCAAAATGCGAG
GCGCCGGCCAAGTATGCATCGCAGCCAATCGCTTCCTAGTACATAGCAGCATCGCGGAGGAATTTACACAGCGTGTAGTA
AACATCATGCGCGGGTTCACCCAAGGACCAGCCACCGCGCCGGGCGTAGATTTCGGTGCGCTTTCCGGCGACGATCAAGT
CAGCACCGTCACCACGCTTGTCGACGATGCCCTCAGCCGTGGCGCTACCAAGCTTCTTGGTGATCTTCCCAAGGGGTTGC
CAGAACACGGAAGCTACTATCCAGCAACCGTGCTTGTGGATGTCCCCGAAGACGCCGACATTCACTGCGAAGAAATCTTT
GGTCCAGTTGTCGTTATCTCTACTTTTGATGATGACGACGAAGCAGTCGCACGTGCCAATGACACAAAGTTTGGTCTTGC
CGCCTATGTGTTTGGCAGCGATCTACAGCGAGTTCTCAACGTAGCAGAACGTGTCGATGCCGGAATGATTGCTGTGAACA
AAGGCGCGCTGTCTGATCCCGCAGCACCATTCGGTGGTGTCAAAGAATCAGGTCTTGGTAGGGAAGGTGGCTTCGAAGGA
ATAGGAGAGTTCCTCGAAACCAAGCTTATTTCGTTACCGCTTTAA

Upstream 100 bases:

>100_bases
CCAACAATACTTTTGATCGGACTTTTGTCACAGTAATCCCAGATACAGCCCGTGACCTGATGGTGGCGCAACCACCGTAG
TGCGGTGCATAGTGGGAACT

Downstream 100 bases:

>100_bases
CGAGCCTCACCGAGACGGCCTCGGCCCATGCGGAGCAAGATACCTGCTAGGGCGGGGCCTTCCTCACCGATTTCCTCACG
GAACTGGTTAATGATGGCCA

Product: putative succinate-semialdehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 494; Mature: 493

Protein sequence:

>494_residues
MTHTTQTLDDRIHELLQRIPTELFIAGQFQPAHNGATLSVTNPSDGSELATVASASEKEARAALDAAEKAQPTWAATPAR
ERSEILRRAYDLVIEHKDDLAMIQSLELGRALPDSEAEVTYAAEFFRWFAEEAVRIRGDYRHNPTGNARIITHQQPVGPC
LAITPWNFPLAMGARKLAPALAAGCTMILKPASKTPLTMLYLAQLLAEAGVPHGVVSVLPTANASVVSDLLHDARIRKLT
FTGSTAVGQKLAAMAAEHSAAVSLELGGNAPYIVLDDADIDTAAQAVAVAKMRGAGQVCIAANRFLVHSSIAEEFTQRVV
NIMRGFTQGPATAPGVDFGALSGDDQVSTVTTLVDDALSRGATKLLGDLPKGLPEHGSYYPATVLVDVPEDADIHCEEIF
GPVVVISTFDDDDEAVARANDTKFGLAAYVFGSDLQRVLNVAERVDAGMIAVNKGALSDPAAPFGGVKESGLGREGGFEG
IGEFLETKLISLPL

Sequences:

>Translated_494_residues
MTHTTQTLDDRIHELLQRIPTELFIAGQFQPAHNGATLSVTNPSDGSELATVASASEKEARAALDAAEKAQPTWAATPAR
ERSEILRRAYDLVIEHKDDLAMIQSLELGRALPDSEAEVTYAAEFFRWFAEEAVRIRGDYRHNPTGNARIITHQQPVGPC
LAITPWNFPLAMGARKLAPALAAGCTMILKPASKTPLTMLYLAQLLAEAGVPHGVVSVLPTANASVVSDLLHDARIRKLT
FTGSTAVGQKLAAMAAEHSAAVSLELGGNAPYIVLDDADIDTAAQAVAVAKMRGAGQVCIAANRFLVHSSIAEEFTQRVV
NIMRGFTQGPATAPGVDFGALSGDDQVSTVTTLVDDALSRGATKLLGDLPKGLPEHGSYYPATVLVDVPEDADIHCEEIF
GPVVVISTFDDDDEAVARANDTKFGLAAYVFGSDLQRVLNVAERVDAGMIAVNKGALSDPAAPFGGVKESGLGREGGFEG
IGEFLETKLISLPL
>Mature_493_residues
THTTQTLDDRIHELLQRIPTELFIAGQFQPAHNGATLSVTNPSDGSELATVASASEKEARAALDAAEKAQPTWAATPARE
RSEILRRAYDLVIEHKDDLAMIQSLELGRALPDSEAEVTYAAEFFRWFAEEAVRIRGDYRHNPTGNARIITHQQPVGPCL
AITPWNFPLAMGARKLAPALAAGCTMILKPASKTPLTMLYLAQLLAEAGVPHGVVSVLPTANASVVSDLLHDARIRKLTF
TGSTAVGQKLAAMAAEHSAAVSLELGGNAPYIVLDDADIDTAAQAVAVAKMRGAGQVCIAANRFLVHSSIAEEFTQRVVN
IMRGFTQGPATAPGVDFGALSGDDQVSTVTTLVDDALSRGATKLLGDLPKGLPEHGSYYPATVLVDVPEDADIHCEEIFG
PVVVISTFDDDDEAVARANDTKFGLAAYVFGSDLQRVLNVAERVDAGMIAVNKGALSDPAAPFGGVKESGLGREGGFEGI
GEFLETKLISLPL

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=481, Percent_Identity=40.956340956341, Blast_Score=332, Evalue=4e-91,
Organism=Homo sapiens, GI25777721, Length=494, Percent_Identity=39.6761133603239, Blast_Score=322, Evalue=6e-88,
Organism=Homo sapiens, GI238814322, Length=496, Percent_Identity=35.8870967741936, Blast_Score=293, Evalue=4e-79,
Organism=Homo sapiens, GI21614513, Length=486, Percent_Identity=36.0082304526749, Blast_Score=284, Evalue=1e-76,
Organism=Homo sapiens, GI25777724, Length=484, Percent_Identity=35.5371900826446, Blast_Score=267, Evalue=1e-71,
Organism=Homo sapiens, GI12007648, Length=478, Percent_Identity=32.6359832635983, Blast_Score=267, Evalue=2e-71,
Organism=Homo sapiens, GI21361176, Length=484, Percent_Identity=34.9173553719008, Blast_Score=266, Evalue=3e-71,
Organism=Homo sapiens, GI25777730, Length=490, Percent_Identity=36.1224489795918, Blast_Score=258, Evalue=9e-69,
Organism=Homo sapiens, GI153266822, Length=482, Percent_Identity=34.6473029045643, Blast_Score=256, Evalue=4e-68,
Organism=Homo sapiens, GI115387104, Length=473, Percent_Identity=32.3467230443975, Blast_Score=253, Evalue=3e-67,
Organism=Homo sapiens, GI25777728, Length=423, Percent_Identity=36.8794326241135, Blast_Score=244, Evalue=1e-64,
Organism=Homo sapiens, GI25777732, Length=488, Percent_Identity=33.6065573770492, Blast_Score=239, Evalue=4e-63,
Organism=Homo sapiens, GI25777726, Length=479, Percent_Identity=32.3590814196242, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI25952152, Length=472, Percent_Identity=30.9322033898305, Blast_Score=218, Evalue=9e-57,
Organism=Homo sapiens, GI188035924, Length=467, Percent_Identity=28.4796573875803, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI310128103, Length=460, Percent_Identity=28.9130434782609, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI310128093, Length=452, Percent_Identity=29.4247787610619, Blast_Score=178, Evalue=8e-45,
Organism=Homo sapiens, GI11095441, Length=480, Percent_Identity=25.625, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI301500698, Length=260, Percent_Identity=34.2307692307692, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI223972651, Length=469, Percent_Identity=29.8507462686567, Blast_Score=159, Evalue=8e-39,
Organism=Homo sapiens, GI310128091, Length=382, Percent_Identity=29.8429319371728, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI206597441, Length=373, Percent_Identity=28.1501340482574, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI206597439, Length=373, Percent_Identity=28.1501340482574, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI22907049, Length=373, Percent_Identity=28.1501340482574, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI4502043, Length=367, Percent_Identity=31.8801089918256, Blast_Score=136, Evalue=5e-32,
Organism=Homo sapiens, GI238814371, Length=367, Percent_Identity=31.8801089918256, Blast_Score=136, Evalue=5e-32,
Organism=Homo sapiens, GI73695881, Length=333, Percent_Identity=31.8318318318318, Blast_Score=135, Evalue=8e-32,
Organism=Homo sapiens, GI73695879, Length=333, Percent_Identity=31.8318318318318, Blast_Score=135, Evalue=8e-32,
Organism=Homo sapiens, GI71773324, Length=339, Percent_Identity=32.1533923303835, Blast_Score=133, Evalue=4e-31,
Organism=Homo sapiens, GI310128089, Length=290, Percent_Identity=30.3448275862069, Blast_Score=132, Evalue=1e-30,
Organism=Homo sapiens, GI4557303, Length=333, Percent_Identity=27.9279279279279, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI73466520, Length=333, Percent_Identity=27.9279279279279, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI310128097, Length=253, Percent_Identity=32.4110671936759, Blast_Score=124, Evalue=3e-28,
Organism=Homo sapiens, GI310128095, Length=306, Percent_Identity=29.7385620915033, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI310128087, Length=277, Percent_Identity=28.8808664259928, Blast_Score=109, Evalue=8e-24,
Organism=Homo sapiens, GI25777736, Length=452, Percent_Identity=24.1150442477876, Blast_Score=96, Evalue=8e-20,
Organism=Homo sapiens, GI25777734, Length=452, Percent_Identity=24.1150442477876, Blast_Score=96, Evalue=8e-20,
Organism=Homo sapiens, GI238859541, Length=452, Percent_Identity=24.1150442477876, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI223972653, Length=184, Percent_Identity=32.6086956521739, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI310128099, Length=228, Percent_Identity=27.6315789473684, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI310128101, Length=228, Percent_Identity=27.6315789473684, Blast_Score=81, Evalue=2e-15,
Organism=Escherichia coli, GI1789015, Length=471, Percent_Identity=44.3736730360934, Blast_Score=416, Evalue=1e-117,
Organism=Escherichia coli, GI87081896, Length=500, Percent_Identity=34.2, Blast_Score=274, Evalue=9e-75,
Organism=Escherichia coli, GI1786504, Length=478, Percent_Identity=35.9832635983264, Blast_Score=269, Evalue=3e-73,
Organism=Escherichia coli, GI1787684, Length=471, Percent_Identity=31.8471337579618, Blast_Score=262, Evalue=3e-71,
Organism=Escherichia coli, GI1787558, Length=481, Percent_Identity=33.4719334719335, Blast_Score=244, Evalue=9e-66,
Organism=Escherichia coli, GI87081926, Length=451, Percent_Identity=33.0376940133038, Blast_Score=226, Evalue=2e-60,
Organism=Escherichia coli, GI87082295, Length=477, Percent_Identity=32.4947589098532, Blast_Score=225, Evalue=5e-60,
Organism=Escherichia coli, GI1787715, Length=470, Percent_Identity=32.7659574468085, Blast_Score=217, Evalue=1e-57,
Organism=Escherichia coli, GI1787250, Length=462, Percent_Identity=28.3549783549784, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1788042, Length=464, Percent_Identity=29.5258620689655, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1787653, Length=442, Percent_Identity=24.6606334841629, Blast_Score=74, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17534119, Length=466, Percent_Identity=37.1244635193133, Blast_Score=307, Evalue=8e-84,
Organism=Caenorhabditis elegans, GI133930964, Length=495, Percent_Identity=35.5555555555556, Blast_Score=278, Evalue=4e-75,
Organism=Caenorhabditis elegans, GI17562198, Length=504, Percent_Identity=35.1190476190476, Blast_Score=276, Evalue=2e-74,
Organism=Caenorhabditis elegans, GI25143876, Length=459, Percent_Identity=35.9477124183007, Blast_Score=274, Evalue=6e-74,
Organism=Caenorhabditis elegans, GI25143874, Length=459, Percent_Identity=35.9477124183007, Blast_Score=274, Evalue=6e-74,
Organism=Caenorhabditis elegans, GI25144435, Length=489, Percent_Identity=34.1513292433538, Blast_Score=254, Evalue=8e-68,
Organism=Caenorhabditis elegans, GI17551164, Length=494, Percent_Identity=31.1740890688259, Blast_Score=235, Evalue=4e-62,
Organism=Caenorhabditis elegans, GI32564736, Length=422, Percent_Identity=34.3601895734597, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI71995606, Length=487, Percent_Identity=30.8008213552361, Blast_Score=221, Evalue=7e-58,
Organism=Caenorhabditis elegans, GI71995613, Length=426, Percent_Identity=30.2816901408451, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI115534176, Length=490, Percent_Identity=25.9183673469388, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI71986308, Length=434, Percent_Identity=25.8064516129032, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17564084, Length=430, Percent_Identity=28.8372093023256, Blast_Score=144, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI25146394, Length=340, Percent_Identity=29.7058823529412, Blast_Score=142, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI32566756, Length=340, Percent_Identity=29.7058823529412, Blast_Score=142, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI25146391, Length=340, Percent_Identity=29.7058823529412, Blast_Score=142, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI17534447, Length=456, Percent_Identity=28.2894736842105, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI32564151, Length=417, Percent_Identity=28.0575539568345, Blast_Score=115, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI115532534, Length=393, Percent_Identity=26.972010178117, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI71990744, Length=302, Percent_Identity=28.8079470198675, Blast_Score=87, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6319478, Length=459, Percent_Identity=40.7407407407407, Blast_Score=345, Evalue=1e-95,
Organism=Saccharomyces cerevisiae, GI6320917, Length=477, Percent_Identity=36.2683438155136, Blast_Score=297, Evalue=2e-81,
Organism=Saccharomyces cerevisiae, GI6324950, Length=478, Percent_Identity=34.9372384937238, Blast_Score=279, Evalue=7e-76,
Organism=Saccharomyces cerevisiae, GI6325196, Length=480, Percent_Identity=35.625, Blast_Score=271, Evalue=2e-73,
Organism=Saccharomyces cerevisiae, GI6323821, Length=486, Percent_Identity=33.7448559670782, Blast_Score=267, Evalue=2e-72,
Organism=Saccharomyces cerevisiae, GI6323822, Length=486, Percent_Identity=33.9506172839506, Blast_Score=265, Evalue=1e-71,
Organism=Saccharomyces cerevisiae, GI6321828, Length=464, Percent_Identity=26.7241379310345, Blast_Score=163, Evalue=6e-41,
Organism=Saccharomyces cerevisiae, GI6321826, Length=476, Percent_Identity=25.4201680672269, Blast_Score=107, Evalue=5e-24,
Organism=Saccharomyces cerevisiae, GI6323757, Length=336, Percent_Identity=26.4880952380952, Blast_Score=94, Evalue=5e-20,
Organism=Drosophila melanogaster, GI281362580, Length=461, Percent_Identity=41.8655097613883, Blast_Score=380, Evalue=1e-105,
Organism=Drosophila melanogaster, GI62472918, Length=461, Percent_Identity=41.8655097613883, Blast_Score=380, Evalue=1e-105,
Organism=Drosophila melanogaster, GI62472926, Length=461, Percent_Identity=41.8655097613883, Blast_Score=380, Evalue=1e-105,
Organism=Drosophila melanogaster, GI62472936, Length=461, Percent_Identity=41.8655097613883, Blast_Score=380, Evalue=1e-105,
Organism=Drosophila melanogaster, GI21356737, Length=461, Percent_Identity=41.8655097613883, Blast_Score=380, Evalue=1e-105,
Organism=Drosophila melanogaster, GI24585660, Length=484, Percent_Identity=35.3305785123967, Blast_Score=282, Evalue=3e-76,
Organism=Drosophila melanogaster, GI24650465, Length=488, Percent_Identity=35.2459016393443, Blast_Score=268, Evalue=8e-72,
Organism=Drosophila melanogaster, GI20129399, Length=485, Percent_Identity=35.6701030927835, Blast_Score=254, Evalue=7e-68,
Organism=Drosophila melanogaster, GI24638878, Length=477, Percent_Identity=26.4150943396226, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI24638876, Length=477, Percent_Identity=26.4150943396226, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24666674, Length=483, Percent_Identity=25.2587991718427, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI281360303, Length=427, Percent_Identity=25.2927400468384, Blast_Score=115, Evalue=7e-26,
Organism=Drosophila melanogaster, GI45552499, Length=440, Percent_Identity=25.4545454545455, Blast_Score=115, Evalue=8e-26,
Organism=Drosophila melanogaster, GI281360301, Length=429, Percent_Identity=25.1748251748252, Blast_Score=112, Evalue=9e-25,
Organism=Drosophila melanogaster, GI281360299, Length=430, Percent_Identity=25.3488372093023, Blast_Score=111, Evalue=9e-25,
Organism=Drosophila melanogaster, GI281360297, Length=430, Percent_Identity=25.3488372093023, Blast_Score=111, Evalue=9e-25,
Organism=Drosophila melanogaster, GI281360295, Length=430, Percent_Identity=25.3488372093023, Blast_Score=111, Evalue=9e-25,
Organism=Drosophila melanogaster, GI24586250, Length=430, Percent_Identity=25.3488372093023, Blast_Score=111, Evalue=9e-25,
Organism=Drosophila melanogaster, GI24668425, Length=452, Percent_Identity=24.5575221238938, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24668417, Length=452, Percent_Identity=24.5575221238938, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24668413, Length=452, Percent_Identity=24.5575221238938, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI28574525, Length=456, Percent_Identity=23.9035087719298, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28571806, Length=445, Percent_Identity=23.8202247191011, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28571798, Length=445, Percent_Identity=23.8202247191011, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28571796, Length=445, Percent_Identity=23.8202247191011, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28571794, Length=445, Percent_Identity=23.8202247191011, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28571802, Length=445, Percent_Identity=23.8202247191011, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28571800, Length=445, Percent_Identity=23.8202247191011, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281360293, Length=253, Percent_Identity=25.6916996047431, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 52325; Mature: 52194

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHTTQTLDDRIHELLQRIPTELFIAGQFQPAHNGATLSVTNPSDGSELATVASASEKEA
CCCCHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHCCHHHH
RAALDAAEKAQPTWAATPARERSEILRRAYDLVIEHKDDLAMIQSLELGRALPDSEAEVT
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHH
YAAEFFRWFAEEAVRIRGDYRHNPTGNARIITHQQPVGPCLAITPWNFPLAMGARKLAPA
HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCHHHHCHHHHHHH
LAAGCTMILKPASKTPLTMLYLAQLLAEAGVPHGVVSVLPTANASVVSDLLHDARIRKLT
HHHCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHEEEEE
FTGSTAVGQKLAAMAAEHSAAVSLELGGNAPYIVLDDADIDTAAQAVAVAKMRGAGQVCI
ECCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEE
AANRFLVHSSIAEEFTQRVVNIMRGFTQGPATAPGVDFGALSGDDQVSTVTTLVDDALSR
EECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
GATKLLGDLPKGLPEHGSYYPATVLVDVPEDADIHCEEIFGPVVVISTFDDDDEAVARAN
CHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCEEEEEECCCCHHHHHHCC
DTKFGLAAYVFGSDLQRVLNVAERVDAGMIAVNKGALSDPAAPFGGVKESGLGREGGFEG
CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHH
IGEFLETKLISLPL
HHHHHHHHHHHCCC
>Mature Secondary Structure 
THTTQTLDDRIHELLQRIPTELFIAGQFQPAHNGATLSVTNPSDGSELATVASASEKEA
CCCHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHCCHHHH
RAALDAAEKAQPTWAATPARERSEILRRAYDLVIEHKDDLAMIQSLELGRALPDSEAEVT
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHH
YAAEFFRWFAEEAVRIRGDYRHNPTGNARIITHQQPVGPCLAITPWNFPLAMGARKLAPA
HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCHHHHCHHHHHHH
LAAGCTMILKPASKTPLTMLYLAQLLAEAGVPHGVVSVLPTANASVVSDLLHDARIRKLT
HHHCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHEEEEE
FTGSTAVGQKLAAMAAEHSAAVSLELGGNAPYIVLDDADIDTAAQAVAVAKMRGAGQVCI
ECCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEE
AANRFLVHSSIAEEFTQRVVNIMRGFTQGPATAPGVDFGALSGDDQVSTVTTLVDDALSR
EECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
GATKLLGDLPKGLPEHGSYYPATVLVDVPEDADIHCEEIFGPVVVISTFDDDDEAVARAN
CHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCEEEEEECCCCHHHHHHCC
DTKFGLAAYVFGSDLQRVLNVAERVDAGMIAVNKGALSDPAAPFGGVKESGLGREGGFEG
CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHH
IGEFLETKLISLPL
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]