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The map label for this gene is yccF [H]

Identifier: 38233428

GI number: 38233428

Start: 807364

End: 807777

Strand: Direct

Name: yccF [H]

Synonym: DIP0831

Alternate gene names: 38233428

Gene position: 807364-807777 (Clockwise)

Preceding gene: 38233426

Following gene: 38233430

Centisome position: 32.44

GC content: 49.03

Gene sequence:

>414_bases
ATGAAAACTATTCTCAACCTCATCTGGTTAATCACCGGCGGAATTTGGCTTGCTCTTGGATACATAGTGGCTGGCGTGGT
CGCCTGTGCACTGATTATTACAATCCCTGTAGGAGTAGCAAGCTTCAGAATGGCCAACTATGCGCTATGGCCTTTTGGTC
GCACCGTCATTGAAGAAGTAGGCGGCGGATCGACTCTCAATGCCGTTAGCAACGTGGTGTGGTTTATCATCGCAGGTTTC
TGGCTCTCACTTGGTCACCTCACAACCGCATTCGCACAAGCAATCACAATTATTGGTATTCCACTCGCGATTGCCAACCT
GAAGATGATCCCTGTGACATGCTTCCCCTTTGGAAAACACATCGTTGATTCCGACGCTATCCCATTTGGCTACCGCCCTA
TGAGCTCTATGTAG

Upstream 100 bases:

>100_bases
CCAGAAATTGAAAACATATTGGTAATAAATGCCAATGTGGCCAAAACGGGGGTAGCACCCCGTGAGGAAACGCTTGCAAC
GGTGCATTAGGGTGAGAAGC

Downstream 100 bases:

>100_bases
CCCAAGAATCCACACAGGGCCCTCACATCAGCACATCAATAATGCTTGTGTGAGGGCCCGTTATTTTAGGGAGCTAATGC
AGTCTTAGCCGCGGTGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MKTILNLIWLITGGIWLALGYIVAGVVACALIITIPVGVASFRMANYALWPFGRTVIEEVGGGSTLNAVSNVVWFIIAGF
WLSLGHLTTAFAQAITIIGIPLAIANLKMIPVTCFPFGKHIVDSDAIPFGYRPMSSM

Sequences:

>Translated_137_residues
MKTILNLIWLITGGIWLALGYIVAGVVACALIITIPVGVASFRMANYALWPFGRTVIEEVGGGSTLNAVSNVVWFIIAGF
WLSLGHLTTAFAQAITIIGIPLAIANLKMIPVTCFPFGKHIVDSDAIPFGYRPMSSM
>Mature_137_residues
MKTILNLIWLITGGIWLALGYIVAGVVACALIITIPVGVASFRMANYALWPFGRTVIEEVGGGSTLNAVSNVVWFIIAGF
WLSLGHLTTAFAQAITIIGIPLAIANLKMIPVTCFPFGKHIVDSDAIPFGYRPMSSM

Specific function: Unknown

COG id: COG3304

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787195, Length=134, Percent_Identity=34.3283582089552, Blast_Score=79, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005185 [H]

Pfam domain/function: PF03733 DUF307 [H]

EC number: NA

Molecular weight: Translated: 14668; Mature: 14668

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTILNLIWLITGGIWLALGYIVAGVVACALIITIPVGVASFRMANYALWPFGRTVIEEV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHC
GGGSTLNAVSNVVWFIIAGFWLSLGHLTTAFAQAITIIGIPLAIANLKMIPVTCFPFGKH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
IVDSDAIPFGYRPMSSM
HCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTILNLIWLITGGIWLALGYIVAGVVACALIITIPVGVASFRMANYALWPFGRTVIEEV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHC
GGGSTLNAVSNVVWFIIAGFWLSLGHLTTAFAQAITIIGIPLAIANLKMIPVTCFPFGKH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
IVDSDAIPFGYRPMSSM
HCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2542273; 7984428 [H]