Definition Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome.
Accession NC_002935
Length 2,488,635

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The map label for this gene is 38233229

Identifier: 38233229

GI number: 38233229

Start: 589692

End: 590957

Strand: Reverse

Name: 38233229

Synonym: DIP0622

Alternate gene names: NA

Gene position: 590957-589692 (Counterclockwise)

Preceding gene: 38233230

Following gene: 38233218

Centisome position: 23.75

GC content: 48.82

Gene sequence:

>1266_bases
ATGCAGCCAACTCGTAAATCTTGGAAAAATATGACAGTTGGAAGCGTCGAAAGGCCTGAAAAGCACAGTTATCCACAACC
TCATATCACTGGCAGTACACGTCGGAGAGGCCGACGTAATCTCGGAGTATTCATCAACATTGGGGGAATTTTTATGAATA
CTACGGCTTGTTTCGCACATACCGATATGAACGATCCTTTTTCACGACACCTGATTCGACTCAACCAGGCAGAAGTGGAT
TTTTGGCTTTCCGTGGAGCCTGATAAGTTCCGTGATTTTCACACACAAATTGACGAAATAGCTACTCGAATGAGTCTGTC
ACGACGCGAAGTAAAGGAAAATCTTCGCGTCGGTGAAATGCTACGACGCTTTCCAAGGCTGCGCGCATGCGTCGAAAAGC
ATCACCATATTACGATGTCGCGGCTAAAAGCCATCGAACGACAAGTCATGGCTATTGAACCGAAATATATTGCACGCGTC
GACGCCCACTTGACCAACTACTTCACCCCGAAGGTGAAAAACCAAGTGATTCCGCAAGTAGCAACATTAAGCAAACAACT
TCGCGATTACATCACAACGATCGATCCCTCGGCCGCCAAAAAGCCACAAGATCAGCAAAAAAGAAGCGCCACTTTTAAAC
GGAACCTCAATGGACACACGCGGCTAAGCATTCATATCACCGATGCCGAAGCTGTCGAAATCCGCACCTTAATGAAAAAG
CAACACGAAGACGAACCCGTTGATGCGTTTATGAAACTCATCCGTTCAAAAGCTCGCACAAAAGTCGTGCTCAATACCTT
CAAAACTGGAACCGGCCACCTGTATATGGTCGGTGCCGGCACCATTCCAGAAGAAAGCATCACCATTGATTCGCAAAGAA
CCATAGACCTCAACGACCACACCCACAGCTACGCACCCACTGAAGAGATTCGAGCCGCCGTCATGCTTCTCGACCGTCAC
TGCCGATATCCAGGCTGCACCGTCGACGCCCTCGAATGCGATCTGGACCACGTAATAAATCATGACGAAGGCGGCGAAAC
CTCAATCGCGAATCTCGCCTGTCTATGCCGCTTCCACCACAACATCAAAACCGAACAACGCATTCACTACAGCCTCGACG
CCAACCGAATCGCAACATTTCATTTCCGCAACGGGGCAACAAAAACCACCCAACCCGGGGGAATAAAAGTTAAACACAGG
TTCAGCCAAACATGGCAACGCCACGAACAACAACGCATCCGCACCAGACGAAACCAATCCGCTTAA

Upstream 100 bases:

>100_bases
CGGAAGGAATCGACGATTCCTTCCGAACCAAACTAGAGCGCTGAGTCGATCACAGATCTAAATAAACTGCAACCACCACG
ATCGGGTCTGTGGATAACGT

Downstream 100 bases:

>100_bases
ACCACGCGTTTCGACGTATTCCGATACCTGGACTTCTCACTTTTCATAGACAAATTTTCACAATAAACAAGACAAAAGCG
CTGCAAAACAAAAGCTTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MQPTRKSWKNMTVGSVERPEKHSYPQPHITGSTRRRGRRNLGVFINIGGIFMNTTACFAHTDMNDPFSRHLIRLNQAEVD
FWLSVEPDKFRDFHTQIDEIATRMSLSRREVKENLRVGEMLRRFPRLRACVEKHHHITMSRLKAIERQVMAIEPKYIARV
DAHLTNYFTPKVKNQVIPQVATLSKQLRDYITTIDPSAAKKPQDQQKRSATFKRNLNGHTRLSIHITDAEAVEIRTLMKK
QHEDEPVDAFMKLIRSKARTKVVLNTFKTGTGHLYMVGAGTIPEESITIDSQRTIDLNDHTHSYAPTEEIRAAVMLLDRH
CRYPGCTVDALECDLDHVINHDEGGETSIANLACLCRFHHNIKTEQRIHYSLDANRIATFHFRNGATKTTQPGGIKVKHR
FSQTWQRHEQQRIRTRRNQSA

Sequences:

>Translated_421_residues
MQPTRKSWKNMTVGSVERPEKHSYPQPHITGSTRRRGRRNLGVFINIGGIFMNTTACFAHTDMNDPFSRHLIRLNQAEVD
FWLSVEPDKFRDFHTQIDEIATRMSLSRREVKENLRVGEMLRRFPRLRACVEKHHHITMSRLKAIERQVMAIEPKYIARV
DAHLTNYFTPKVKNQVIPQVATLSKQLRDYITTIDPSAAKKPQDQQKRSATFKRNLNGHTRLSIHITDAEAVEIRTLMKK
QHEDEPVDAFMKLIRSKARTKVVLNTFKTGTGHLYMVGAGTIPEESITIDSQRTIDLNDHTHSYAPTEEIRAAVMLLDRH
CRYPGCTVDALECDLDHVINHDEGGETSIANLACLCRFHHNIKTEQRIHYSLDANRIATFHFRNGATKTTQPGGIKVKHR
FSQTWQRHEQQRIRTRRNQSA
>Mature_421_residues
MQPTRKSWKNMTVGSVERPEKHSYPQPHITGSTRRRGRRNLGVFINIGGIFMNTTACFAHTDMNDPFSRHLIRLNQAEVD
FWLSVEPDKFRDFHTQIDEIATRMSLSRREVKENLRVGEMLRRFPRLRACVEKHHHITMSRLKAIERQVMAIEPKYIARV
DAHLTNYFTPKVKNQVIPQVATLSKQLRDYITTIDPSAAKKPQDQQKRSATFKRNLNGHTRLSIHITDAEAVEIRTLMKK
QHEDEPVDAFMKLIRSKARTKVVLNTFKTGTGHLYMVGAGTIPEESITIDSQRTIDLNDHTHSYAPTEEIRAAVMLLDRH
CRYPGCTVDALECDLDHVINHDEGGETSIANLACLCRFHHNIKTEQRIHYSLDANRIATFHFRNGATKTTQPGGIKVKHR
FSQTWQRHEQQRIRTRRNQSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48706; Mature: 48706

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPTRKSWKNMTVGSVERPEKHSYPQPHITGSTRRRGRRNLGVFINIGGIFMNTTACFAH
CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCEEEECEEEEEE
TDMNDPFSRHLIRLNQAEVDFWLSVEPDKFRDFHTQIDEIATRMSLSRREVKENLRVGEM
CCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LRRFPRLRACVEKHHHITMSRLKAIERQVMAIEPKYIARVDAHLTNYFTPKVKNQVIPQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCCCHHHHHHHHHH
ATLSKQLRDYITTIDPSAAKKPQDQQKRSATFKRNLNGHTRLSIHITDAEAVEIRTLMKK
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHH
QHEDEPVDAFMKLIRSKARTKVVLNTFKTGTGHLYMVGAGTIPEESITIDSQRTIDLNDH
CCCCCHHHHHHHHHHHHHHHEEEHEEECCCCCEEEEEECCCCCCCCEEECCCEEEECCCC
THSYAPTEEIRAAVMLLDRHCRYPGCTVDALECDLDHVINHDEGGETSIANLACLCRFHH
CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHH
NIKTEQRIHYSLDANRIATFHFRNGATKTTQPGGIKVKHRFSQTWQRHEQQRIRTRRNQS
CCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC
A
C
>Mature Secondary Structure
MQPTRKSWKNMTVGSVERPEKHSYPQPHITGSTRRRGRRNLGVFINIGGIFMNTTACFAH
CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCEEEECEEEEEE
TDMNDPFSRHLIRLNQAEVDFWLSVEPDKFRDFHTQIDEIATRMSLSRREVKENLRVGEM
CCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LRRFPRLRACVEKHHHITMSRLKAIERQVMAIEPKYIARVDAHLTNYFTPKVKNQVIPQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCCCHHHHHHHHHH
ATLSKQLRDYITTIDPSAAKKPQDQQKRSATFKRNLNGHTRLSIHITDAEAVEIRTLMKK
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHH
QHEDEPVDAFMKLIRSKARTKVVLNTFKTGTGHLYMVGAGTIPEESITIDSQRTIDLNDH
CCCCCHHHHHHHHHHHHHHHEEEHEEECCCCCEEEEEECCCCCCCCEEECCCEEEECCCC
THSYAPTEEIRAAVMLLDRHCRYPGCTVDALECDLDHVINHDEGGETSIANLACLCRFHH
CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHH
NIKTEQRIHYSLDANRIATFHFRNGATKTTQPGGIKVKHRFSQTWQRHEQQRIRTRRNQS
CCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA