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The map label for this gene is metQ [H]

Identifier: 38233218

GI number: 38233218

Start: 577994

End: 578866

Strand: Reverse

Name: metQ [H]

Synonym: DIP0611

Alternate gene names: 38233218

Gene position: 578866-577994 (Counterclockwise)

Preceding gene: 38233229

Following gene: 38233217

Centisome position: 23.26

GC content: 54.64

Gene sequence:

>873_bases
ATGAAACTCCGCCGCAGCGTCGCTTTAGTCTCCGCCTCTCTTATCGCAGCAACCGGACTTGTTGCTTGCTCCAACTCCTC
CGATAGCTCCGATCAGACAACCGTTAAGATCGGCACCACCGACGGTTCCAAAAAGTCATGGAAGGTATTCGAGGACAAAG
CCAAAGAAGCCGGCATCAAGCTCGACATTAAAAACTTCTCCGATTACTCCACCCCTAACGACGCCCTCGCACAAGACCAG
CTCGACGTTAACCTCTTCCAGCACCTCAAATTCCTCGCCGAGTACAACGTCGGAAAGAATGCTGACCTCACCCCAGTAGG
CGCTACCGAGATCGTTCCACTCGCACTGTTCTGGAAAGACCACACCTCTCTCGACGGCATCGAGGGCAAATCCGTAGCCA
TCCCTAACGACCCCTCCAACCAAGGCCGCGCTATCAACGTCCTCGTCCAAGCCAAGCTCATCACCCTGAAAAAAGAAGGC
CTGATCACCCCAGCACCTAGCGACGTCGACGAGGCAAAATCTAAGGTCAAGCTCACCCCTGTTGATGCAGCTCAGACCAC
CACCGCCTACGGCGAAGGCACTCCAGCCATCATCAACAACTCCTTCCTCGACCGTGCCGGCATCGACCCTAAACTCTCCG
TATTCCAGGATGACCCCAACTCCGCCGAAGCAGAGCCATACATCAACGCCTTCGTAACCAAAGCCGAAGACAAAGACGAC
GCCAACATCGCAAAACTCGTTGAAATCTGGCACTCCAAGGAAGTTCAAGACGCTGTAGCCGAAGACTCCAAGGGAACCTC
CGTCCCAGTCCAGCGCACCGCCGAAGAGCTCAAAAAGATCCTTGATCGCCTCGAAGCAGACCAAAAGAAGTAA

Upstream 100 bases:

>100_bases
ACTTAGCGCCACATGCAGGGCATACGCAGCATGTCTACGCACAAGGAGACGTCGAAACGCATGAAACTTTTACATAAACC
TCATAACAGAAAGACAAATC

Downstream 100 bases:

>100_bases
CCCTTTACATCACATCAAGCCCCGTAACCTCTGCGCGAGGTTCGCGGGGCTTGGCCCCTTAAATAAGGACACGAAAAACG
CCACATCGCTTCCCCACTAG

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MKLRRSVALVSASLIAATGLVACSNSSDSSDQTTVKIGTTDGSKKSWKVFEDKAKEAGIKLDIKNFSDYSTPNDALAQDQ
LDVNLFQHLKFLAEYNVGKNADLTPVGATEIVPLALFWKDHTSLDGIEGKSVAIPNDPSNQGRAINVLVQAKLITLKKEG
LITPAPSDVDEAKSKVKLTPVDAAQTTTAYGEGTPAIINNSFLDRAGIDPKLSVFQDDPNSAEAEPYINAFVTKAEDKDD
ANIAKLVEIWHSKEVQDAVAEDSKGTSVPVQRTAEELKKILDRLEADQKK

Sequences:

>Translated_290_residues
MKLRRSVALVSASLIAATGLVACSNSSDSSDQTTVKIGTTDGSKKSWKVFEDKAKEAGIKLDIKNFSDYSTPNDALAQDQ
LDVNLFQHLKFLAEYNVGKNADLTPVGATEIVPLALFWKDHTSLDGIEGKSVAIPNDPSNQGRAINVLVQAKLITLKKEG
LITPAPSDVDEAKSKVKLTPVDAAQTTTAYGEGTPAIINNSFLDRAGIDPKLSVFQDDPNSAEAEPYINAFVTKAEDKDD
ANIAKLVEIWHSKEVQDAVAEDSKGTSVPVQRTAEELKKILDRLEADQKK
>Mature_290_residues
MKLRRSVALVSASLIAATGLVACSNSSDSSDQTTVKIGTTDGSKKSWKVFEDKAKEAGIKLDIKNFSDYSTPNDALAQDQ
LDVNLFQHLKFLAEYNVGKNADLTPVGATEIVPLALFWKDHTSLDGIEGKSVAIPNDPSNQGRAINVLVQAKLITLKKEG
LITPAPSDVDEAKSKVKLTPVDAAQTTTAYGEGTPAIINNSFLDRAGIDPKLSVFQDDPNSAEAEPYINAFVTKAEDKDD
ANIAKLVEIWHSKEVQDAVAEDSKGTSVPVQRTAEELKKILDRLEADQKK

Specific function: This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system [H]

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=266, Percent_Identity=31.9548872180451, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1790093, Length=253, Percent_Identity=33.201581027668, Blast_Score=122, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 31280; Mature: 31280

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRRSVALVSASLIAATGLVACSNSSDSSDQTTVKIGTTDGSKKSWKVFEDKAKEAGIK
CCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCE
LDIKNFSDYSTPNDALAQDQLDVNLFQHLKFLAEYNVGKNADLTPVGATEIVPLALFWKD
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEEEECC
HTSLDGIEGKSVAIPNDPSNQGRAINVLVQAKLITLKKEGLITPAPSDVDEAKSKVKLTP
CCCCCCCCCCEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCHHHHHHEEEEEE
VDAAQTTTAYGEGTPAIINNSFLDRAGIDPKLSVFQDDPNSAEAEPYINAFVTKAEDKDD
CCCCCCCCCCCCCCCCEECCCHHHHCCCCCCEEEEECCCCCCCCCHHHHHEEECCCCCCC
ANIAKLVEIWHSKEVQDAVAEDSKGTSVPVQRTAEELKKILDRLEADQKK
HHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKLRRSVALVSASLIAATGLVACSNSSDSSDQTTVKIGTTDGSKKSWKVFEDKAKEAGIK
CCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCE
LDIKNFSDYSTPNDALAQDQLDVNLFQHLKFLAEYNVGKNADLTPVGATEIVPLALFWKD
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEEEECC
HTSLDGIEGKSVAIPNDPSNQGRAINVLVQAKLITLKKEGLITPAPSDVDEAKSKVKLTP
CCCCCCCCCCEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCHHHHHHEEEEEE
VDAAQTTTAYGEGTPAIINNSFLDRAGIDPKLSVFQDDPNSAEAEPYINAFVTKAEDKDD
CCCCCCCCCCCCCCCCEECCCHHHHCCCCCCEEEEECCCCCCCCCHHHHHEEECCCCCCC
ANIAKLVEIWHSKEVQDAVAEDSKGTSVPVQRTAEELKKILDRLEADQKK
HHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]