Definition Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome.
Accession NC_002935
Length 2,488,635

Click here to switch to the map view.

The map label for this gene is yjeE [C]

Identifier: 38233178

GI number: 38233178

Start: 537967

End: 538461

Strand: Direct

Name: yjeE [C]

Synonym: DIP0569

Alternate gene names: 38233178

Gene position: 537967-538461 (Clockwise)

Preceding gene: 38233177

Following gene: 38233179

Centisome position: 21.62

GC content: 55.56

Gene sequence:

>495_bases
ATGGATACCACCTTTGCTCGTAGCGGAAACATACGACTCGAAACCGCCGCAGAAACCCAAGCCTTCGCCGAAGAACTTGG
TCGTCATCTCGAAGCAGGAGACGTAATCATTCTCGACGGCCCCCTCGGCGCAGGTAAAACCACCTTCACCCAAGGGTTAG
CCCGCGGACTCAACGTCAAAGGCCGCGTTACCTCGCCAACCTTCGTGATCGCTCGCGAACACAAGTCACTAAGCGGTGGA
CCATCGCTTGTACACGTCGACGCATACCGCCTTATCGACGACGCCGCCGGTGCCACCGATCCCATCGGTGCACTCGATTC
TCTAGACCTAGAAACTGAGCTAGAAGATGCCGTTGTAGTCGCCGAATGGGGTGGGGGACTAGTCGAACAGATTACTGATA
GCTACCTGCTCATCACCTTTGATCGGACCACAGCGCATATCGACGACCCCGATTCGGAGGCCAGAATTGTGACGTGGAAA
GTTATCGAACCCTAA

Upstream 100 bases:

>100_bases
CAACTATGAAATCTTGTGCCGCCCGACCGGACGAAGCCATAGAACCTATAGTGCTCTTGACGCCGTTGCGCCCACGCACC
CTACTGAAAGCTGATACCCC

Downstream 100 bases:

>100_bases
AAGAGATCTACGTCGGGAACCTCCTATCGACGTGAAATCATCCAGCCGGCAGTTTCCGGCAATTTACTGAAAACATATCA
ACATTCATGCCGTGAACTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MDTTFARSGNIRLETAAETQAFAEELGRHLEAGDVIILDGPLGAGKTTFTQGLARGLNVKGRVTSPTFVIAREHKSLSGG
PSLVHVDAYRLIDDAAGATDPIGALDSLDLETELEDAVVVAEWGGGLVEQITDSYLLITFDRTTAHIDDPDSEARIVTWK
VIEP

Sequences:

>Translated_164_residues
MDTTFARSGNIRLETAAETQAFAEELGRHLEAGDVIILDGPLGAGKTTFTQGLARGLNVKGRVTSPTFVIAREHKSLSGG
PSLVHVDAYRLIDDAAGATDPIGALDSLDLETELEDAVVVAEWGGGLVEQITDSYLLITFDRTTAHIDDPDSEARIVTWK
VIEP
>Mature_164_residues
MDTTFARSGNIRLETAAETQAFAEELGRHLEAGDVIILDGPLGAGKTTFTQGLARGLNVKGRVTSPTFVIAREHKSLSGG
PSLVHVDAYRLIDDAAGATDPIGALDSLDLETELEDAVVVAEWGGGLVEQITDSYLLITFDRTTAHIDDPDSEARIVTWK
VIEP

Specific function: Unknown

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 17516; Mature: 17516

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTTFARSGNIRLETAAETQAFAEELGRHLEAGDVIILDGPLGAGKTTFTQGLARGLNVK
CCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCC
GRVTSPTFVIAREHKSLSGGPSLVHVDAYRLIDDAAGATDPIGALDSLDLETELEDAVVV
CEECCCEEEEEECCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEE
AEWGGGLVEQITDSYLLITFDRTTAHIDDPDSEARIVTWKVIEP
EECCCCHHHHCCCCEEEEEECCCEEECCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MDTTFARSGNIRLETAAETQAFAEELGRHLEAGDVIILDGPLGAGKTTFTQGLARGLNVK
CCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCC
GRVTSPTFVIAREHKSLSGGPSLVHVDAYRLIDDAAGATDPIGALDSLDLETELEDAVVV
CEECCCEEEEEECCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEE
AEWGGGLVEQITDSYLLITFDRTTAHIDDPDSEARIVTWKVIEP
EECCCCHHHHCCCCEEEEEECCCEEECCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]