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The map label for this gene is yidE [C]

Identifier: 38233179

GI number: 38233179

Start: 538648

End: 540333

Strand: Direct

Name: yidE [C]

Synonym: DIP0570

Alternate gene names: 38233179

Gene position: 538648-540333 (Clockwise)

Preceding gene: 38233178

Following gene: 38233180

Centisome position: 21.64

GC content: 58.78

Gene sequence:

>1686_bases
GTGCAGATACGTGTCCCTCAACGCAACAGGGGCCGGACGTTTCCTCATCGTTCGTCTCACAGGAGAACTCCAATTCATAT
CCTCGAATTTCTCGCAGCTCAGCCCCTGCTGACGCTCGCGCTCATTCTGGCCGTCGGCCTGCTTATCGGCAAGATCCGAT
TCTTCGGAATCTCACTCGGTGCCGCCGCCGTCCTCTTCGTAGCCCTCGCGCTATCCACAGTGGACCCAGCCCTCCAACTG
CCACCACTGGTCTATCAGCTTGGCCTCGCCATGTTCGTGTACGCCATCGGTCTGTCTGCCGGCTCCGAATTCTTCGCTGA
ATTCCGCCACCGCGGTTGGAAACTCACCCTGTTCATGATCGGCCTGCTCATGCTTATGATGGCCGTTGCATACGGCATCA
TCAAGCTATTTGGCCTCGACGAAATCATCGGTGCCGGCATGTTCGCCGGTGCACTCTCATCAACCCCCGGCATGGCCGCC
ATGGTCGAAATGCTGGAAGGAATCGACGATTCTGTCGCATCAGAACCAGTCGTGGGGTACTCGCTGGCATACCCAGGTGC
TGTGATCGGATCGATTCTTGTTGCAGCCATTGGTGCGAAGTTGATGAAGGTCAACCATGCCGCCGACGCTGCCGAAGAAG
GCTTGGTGTCGGATCCGCTGGAGTGGACCGGTGTGCGCATCGGCCCAGGAATCAACGGTACGATCGCCCAGCTGCCAACT
CTTGCCGGTGAGGAAATCATCGCTACTCGCGTGGTGCACTCCAAGACTTTCCACTCTCTTGCTGCGCCGAATGATCGTCT
GCACGAAGGCATGGTGTTGGTGATTCATGGCACCCCTGATGCGCTTGAGCGTGCTATCGCTAAGGTCGGTAAGCAGCAGG
ATGTACCGATTGAAGATACCGATTTGGTTTATTCACGGTTCACGGTGTCGTCGAAAGCTGTTGTCGGCCGCAAGATTTCG
GACCTCGACACGGTTCGTTCCGGCTTCATTATTTCCCGCCTGCGTCGTGGCGACGCCGATGTTGTGCCCGAGCCTGACGA
CGTGCTGCACTACTCTGACCGTGTGCGCGTGATCGCCCCCGCTAACCGCATGAGCGAAGTGCGTCGCTTCCTCGGCGACT
CTGAACGCTCGCTTGCCGACGTCGACCTCATGCCATTCGCCTTCGGCCTTGTCATCGGTCTAGCTATTGGTGTTATCCCG
ATCCCGCTGCCAGGCGGAAACACCTTGTCTTTGGGCTTCGGTGGTGGCCCCATCGTCGCAGGCCTGATCCTCGGCGCGCT
CAACCGCACCGGCCCGATCCACTGGCAGATGCCTTATCACGCAAGCCGCACGATCAGCACCTTCGGTCTGGCCATCTTCC
TCGCCGGCGTGGGAACATCCGCTGGCGTGGGCTTCCGCCAAGCGCTCACGGACCCTGCCTCGCTCACCGTCATCGCCGGT
GGCTTCATCGTGACTATCTCTTCCGCACTCGTGTGTGCTTTGGTCTGCATGCCGCTATTCAAACTGAAATGGGACGAAGC
AATGGGCGTGGCAGCAGGATGTACCACCAACCCCGCCATCATCTCCTACCTCAACGGACAAACCGGCACTGAGCTGGCCA
CACGTGGGTACGCCACCGTGTATCCCACGGCCATGATCGGCAAAATTATTGCCAGCCAGATGCTACTGTTGGCACTGATC
GCTTAA

Upstream 100 bases:

>100_bases
ATGCCGTGAACTGCCGATATCACCTGCGACAGGGGCGTCGAAACGCCTCGGCGGGCCAGCCGAAAGAATTGATTTTCCTG
CAGTTTCTAAGCACAATCAT

Downstream 100 bases:

>100_bases
TCGAAATAAGCGCTCGTTTGTACCCAAGATCCCAGCTTGCCTCGCACCAACCATCGCGGGGAAGCTGGGATTTTCGGTTC
GTGCGTAGTACTCTGCTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 561; Mature: 561

Protein sequence:

>561_residues
MQIRVPQRNRGRTFPHRSSHRRTPIHILEFLAAQPLLTLALILAVGLLIGKIRFFGISLGAAAVLFVALALSTVDPALQL
PPLVYQLGLAMFVYAIGLSAGSEFFAEFRHRGWKLTLFMIGLLMLMMAVAYGIIKLFGLDEIIGAGMFAGALSSTPGMAA
MVEMLEGIDDSVASEPVVGYSLAYPGAVIGSILVAAIGAKLMKVNHAADAAEEGLVSDPLEWTGVRIGPGINGTIAQLPT
LAGEEIIATRVVHSKTFHSLAAPNDRLHEGMVLVIHGTPDALERAIAKVGKQQDVPIEDTDLVYSRFTVSSKAVVGRKIS
DLDTVRSGFIISRLRRGDADVVPEPDDVLHYSDRVRVIAPANRMSEVRRFLGDSERSLADVDLMPFAFGLVIGLAIGVIP
IPLPGGNTLSLGFGGGPIVAGLILGALNRTGPIHWQMPYHASRTISTFGLAIFLAGVGTSAGVGFRQALTDPASLTVIAG
GFIVTISSALVCALVCMPLFKLKWDEAMGVAAGCTTNPAIISYLNGQTGTELATRGYATVYPTAMIGKIIASQMLLLALI
A

Sequences:

>Translated_561_residues
MQIRVPQRNRGRTFPHRSSHRRTPIHILEFLAAQPLLTLALILAVGLLIGKIRFFGISLGAAAVLFVALALSTVDPALQL
PPLVYQLGLAMFVYAIGLSAGSEFFAEFRHRGWKLTLFMIGLLMLMMAVAYGIIKLFGLDEIIGAGMFAGALSSTPGMAA
MVEMLEGIDDSVASEPVVGYSLAYPGAVIGSILVAAIGAKLMKVNHAADAAEEGLVSDPLEWTGVRIGPGINGTIAQLPT
LAGEEIIATRVVHSKTFHSLAAPNDRLHEGMVLVIHGTPDALERAIAKVGKQQDVPIEDTDLVYSRFTVSSKAVVGRKIS
DLDTVRSGFIISRLRRGDADVVPEPDDVLHYSDRVRVIAPANRMSEVRRFLGDSERSLADVDLMPFAFGLVIGLAIGVIP
IPLPGGNTLSLGFGGGPIVAGLILGALNRTGPIHWQMPYHASRTISTFGLAIFLAGVGTSAGVGFRQALTDPASLTVIAG
GFIVTISSALVCALVCMPLFKLKWDEAMGVAAGCTTNPAIISYLNGQTGTELATRGYATVYPTAMIGKIIASQMLLLALI
A
>Mature_561_residues
MQIRVPQRNRGRTFPHRSSHRRTPIHILEFLAAQPLLTLALILAVGLLIGKIRFFGISLGAAAVLFVALALSTVDPALQL
PPLVYQLGLAMFVYAIGLSAGSEFFAEFRHRGWKLTLFMIGLLMLMMAVAYGIIKLFGLDEIIGAGMFAGALSSTPGMAA
MVEMLEGIDDSVASEPVVGYSLAYPGAVIGSILVAAIGAKLMKVNHAADAAEEGLVSDPLEWTGVRIGPGINGTIAQLPT
LAGEEIIATRVVHSKTFHSLAAPNDRLHEGMVLVIHGTPDALERAIAKVGKQQDVPIEDTDLVYSRFTVSSKAVVGRKIS
DLDTVRSGFIISRLRRGDADVVPEPDDVLHYSDRVRVIAPANRMSEVRRFLGDSERSLADVDLMPFAFGLVIGLAIGVIP
IPLPGGNTLSLGFGGGPIVAGLILGALNRTGPIHWQMPYHASRTISTFGLAIFLAGVGTSAGVGFRQALTDPASLTVIAG
GFIVTISSALVCALVCMPLFKLKWDEAMGVAAGCTTNPAIISYLNGQTGTELATRGYATVYPTAMIGKIIASQMLLLALI
A

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK C-terminal domain

Homologues:

Organism=Escherichia coli, GI87082315, Length=541, Percent_Identity=28.2809611829945, Blast_Score=199, Evalue=5e-52,
Organism=Escherichia coli, GI1787071, Length=548, Percent_Identity=26.4598540145985, Blast_Score=140, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y570_CORDI (Q6NJ43)

Other databases:

- EMBL:   BX248355
- RefSeq:   NP_938946.1
- GeneID:   2648766
- GenomeReviews:   BX248353_GR
- KEGG:   cdi:DIP0570
- NMPDR:   fig|257309.1.peg.537
- HOGENOM:   HBG452396
- OMA:   YSLAYPG
- PhylomeDB:   Q6NJ43
- ProtClustDB:   CLSK632918
- BioCyc:   CDIP257309:DIP0570-MONOMER
- InterPro:   IPR006037
- InterPro:   IPR018225
- InterPro:   IPR006512
- TIGRFAMs:   TIGR01625

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C

EC number: NA

Molecular weight: Translated: 59294; Mature: 59294

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: PS51202 RCK_C; PS01054 TRANSALDOLASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x91f9ed4)-; HASH(0xb655ff4)-; HASH(0xb7f1fa8)-; HASH(0xb9e6594)-; HASH(0x406039f4)-; HASH(0x439c8568)-; HASH(0xbb71fe8)-; HASH(0xb467518)-; HASH(0xb5a4cb0)-; HASH(0xb7f1de0)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIRVPQRNRGRTFPHRSSHRRTPIHILEFLAAQPLLTLALILAVGLLIGKIRFFGISLG
CEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAVLFVALALSTVDPALQLPPLVYQLGLAMFVYAIGLSAGSEFFAEFRHRGWKLTLFMI
HHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH
GLLMLMMAVAYGIIKLFGLDEIIGAGMFAGALSSTPGMAAMVEMLEGIDDSVASEPVVGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCCCCCE
SLAYPGAVIGSILVAAIGAKLMKVNHAADAAEEGLVSDPLEWTGVRIGPGINGTIAQLPT
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCEEECCCCCCHHHHCCC
LAGEEIIATRVVHSKTFHSLAAPNDRLHEGMVLVIHGTPDALERAIAKVGKQQDVPIEDT
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCC
DLVYSRFTVSSKAVVGRKISDLDTVRSGFIISRLRRGDADVVPEPDDVLHYSDRVRVIAP
HHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCEEEEEC
ANRMSEVRRFLGDSERSLADVDLMPFAFGLVIGLAIGVIPIPLPGGNTLSLGFGGGPIVA
HHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHCCEEEECCCCCEEEECCCCHHHHH
GLILGALNRTGPIHWQMPYHASRTISTFGLAIFLAGVGTSAGVGFRQALTDPASLTVIAG
HHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEEEEC
GFIVTISSALVCALVCMPLFKLKWDEAMGVAAGCTTNPAIISYLNGQTGTELATRGYATV
HHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHEEEECCCCCCHHHHCCCHHH
YPTAMIGKIIASQMLLLALIA
HHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MQIRVPQRNRGRTFPHRSSHRRTPIHILEFLAAQPLLTLALILAVGLLIGKIRFFGISLG
CEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAVLFVALALSTVDPALQLPPLVYQLGLAMFVYAIGLSAGSEFFAEFRHRGWKLTLFMI
HHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH
GLLMLMMAVAYGIIKLFGLDEIIGAGMFAGALSSTPGMAAMVEMLEGIDDSVASEPVVGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCCCCCE
SLAYPGAVIGSILVAAIGAKLMKVNHAADAAEEGLVSDPLEWTGVRIGPGINGTIAQLPT
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCEEECCCCCCHHHHCCC
LAGEEIIATRVVHSKTFHSLAAPNDRLHEGMVLVIHGTPDALERAIAKVGKQQDVPIEDT
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCC
DLVYSRFTVSSKAVVGRKISDLDTVRSGFIISRLRRGDADVVPEPDDVLHYSDRVRVIAP
HHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCEEEEEC
ANRMSEVRRFLGDSERSLADVDLMPFAFGLVIGLAIGVIPIPLPGGNTLSLGFGGGPIVA
HHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHCCEEEECCCCCEEEECCCCHHHHH
GLILGALNRTGPIHWQMPYHASRTISTFGLAIFLAGVGTSAGVGFRQALTDPASLTVIAG
HHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEEEEC
GFIVTISSALVCALVCMPLFKLKWDEAMGVAAGCTTNPAIISYLNGQTGTELATRGYATV
HHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHEEEECCCCCCHHHHCCCHHH
YPTAMIGKIIASQMLLLALIA
HHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 14602910