| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is ctpA [H]
Identifier: 38233019
GI number: 38233019
Start: 370197
End: 372722
Strand: Direct
Name: ctpA [H]
Synonym: DIP0405
Alternate gene names: 38233019
Gene position: 370197-372722 (Clockwise)
Preceding gene: 38233017
Following gene: 38233021
Centisome position: 14.88
GC content: 54.75
Gene sequence:
>2526_bases GTGTGGTCCGTGACTGATTCGCCGCTTGACGACGCCATCCAGGAAGCCAAATCCGCTGCGCAGAAGGCGGGATTTGATAC CGAAACTTTTGCCGCTGTGCAGTCGAAGGAGGGGCGTACTTCTTTCGCTTTTGAATTGGAGGGGTTAGGTAGTGCCTCTT CGGTTTCGGAGTTGGAAGAAGCGATCGAGCAGATCGAAGGAGTGGATGCCAAGATCGTTTATCCTTCGGCGATGGCGTGG ATTAGCGCCAGTCGCACGTTGGATCCGACGCTCATTGTGGATGCTTTTCAGCAGCATGGCGTGACGGCTACGTTGACGGA TTCTTCGCTGCGTCGTCGATTGGCGTGGACGGACGTGGAGGAGGGTCGGTATCGCCGCGCGCGTGCTCGCCGCTTTGGTT CGCGTGTCGACGAAGAATCGCGCCGCTTCGAAATTGCTCGGCGCGAAGGGTTTTTGCACAAGCGCGACGAAACCACACGG GTGGTGGAAACCACGGAGGTGTTGTTCACTGCGCGTTCGTTGATGACTAAAGCTCGCCTTTTTACTTCTATTGCCTGCAC GATTCCTGTTTTAGCGGTGAGCTTTTGGCGGGAACTGCAGTTTGATTATTGGCAGTGGGCACTGGCGGCGCTGTCGCTTC CTGTGGTGCTCTATGGTGCGTGGCCGTTTCACCGTGCCACGATTGGTGGTGCGCGCAGGGGAATGTCGGCTCTGGATAGT GCCTCCTCCGTTGCCATTTTGATGGCGTGGGGTTGGTCTATCGTGATGATGCTGTTTTCTTCGGTGGGTGATCCTACGTA CCGTGCGCAGCCGAAGTGGATTGCGATTGATCCCACGAAGTTTGTTTCGGGTGCACTGTTTTTCGATGTTGCATGCGGCA TGACCGTGATCTTGTTGGCGGGACGTATCTTGGTGCGTCGTGCGCGTTCGGATCTTTTGGAAGATTTGAAACGTTATCGC CCGAATCCGTCGTCAACAGTGACGGTGGTGGGAAAGAACCGTAAGACGGGTGAGGTTCGTAAGGAAGAAGTTGCGATTCA GAAGCTCAACGTGGGTGACGATATCCTCATTGCTCCTTATGCGTTGATCCCTGCCGACGGCTATGTTGTTGGTGGCGCTT CTACGATCGATGGCACTGCTTTGGGCATTGGCCGATTGAAGGTCAAGGTCAACGACCATGTTTATGCTGGTTGTGTCAAT GGTTCTAATCCGCTGAAGATTCGTGTGCTTCAAACTGGTCACCGCACATGGTTTGCGGGCATTACGCGGTGGGTGTCGCA GGCAAGTGTGCATCAAAACCATGCGGATGCGGTGGCAACGAGGGCGGCGTCGATGTTGGTGCCTGTCTCTTTTGTTATTG CGGCTACGGATTTTGCGTTGTGGGCGCTGATTACTAATAACCTAAACCAAGCTTTTGCTACCGCGCTGGCGGTATTGGGG TGTGTTTCTCCGGTGGCTCTGGCTACCTCGGCTTCTCTGGCTATGCGTAAGAGCATTGAAGACGCCGCCCGTCAGGGTGT GTTGATCCAAAGTGGTGAGACGTTGCGTGTGATCGATACTGTCGACACAGTAATTTTCAACCGAGTGGGTGCGTTGTCTA AGGCAGGCATGTCGGTAGAAAAGGTCACGGCAGACCGCGGTGAAAATCCAGATTTGGTGCTGCGTGTTGCAGGCGCGTTG GCGATGGAAAGCGATCACCCCGTATCCCGGGCGTTGGTGCGTGCGGCTCGTGAGGCTCGCGATGCTTCGACGGATGATTC GATCCCCGGCTGGATTGACGTGACGCATTCGGAAATCGATGAGGAAGGTAGTTTCCGCGGTTTTGTGGAACTTCCTGTTG GTGAGGAGGCGCGCTCTGTGGAGGCCGTGTTGTGGCGTCCTCGCAGCCTATCGGCACTTGATGGTCGTCTTGCTGCTGCC GCGGAGTCGGGTAGTTCTCCGTTGGTGGTGCGCTGGAAGAACAAGGATCGTGGTGTTATCACCTTGTTTAATGCGGTTAA AGATGATGCCGTGGACGCGGTGGATGATTTGGAAGCCCAAGGCATCGAGACGATGATGCTGAGCCGTGATACCTATCCGG TGGCGCGTCGATACGGCGATAGCGTGGGTGTTTCTCACGTGTTGGCTGGCATTCAGCCTGGTCAAAAGCCGCAGACCGTT CGTTCTGTGCGCAACCACGGTGCCACGATTGCGGTGGTGGGAGATGATTCCATCAATGATTGTTTTCGCGTGGCTAATGT AGGCATTTTGATTGATGCAATGTCGAAGAGCTCGGCAGCTATTGAGCACCCTGTTGCTAATGTCATCATGCTCAAAAATG ATGTTGCGCCTATCCCACGCTTGTTCACCTTTGCGCGTCGACTCAATCGTCGTATTCGCTCAAACTTGGGTTTTGCGTGG GTATATAACGTGGCGGCGATTGTTGCCGCTATTTCTGGGGTGTTGCACCCGATGATCGCAAGCCTGTTTATGTTGGGTGC GACCATCGTGATTGAGGTGCGTTCTACGTGGACGAGGAATTTGTAA
Upstream 100 bases:
>100_bases CAGGGCTGGTTTTTGGCTGATGGTTGTTTGTCCATTGCTTGTGGCGTGGCGGCGATCATTGGTTTGATTTTTGCGCAGAA GAAGGAGTCGCTGGAGTGGG
Downstream 100 bases:
>100_bases GCTGAAGCGTTGGTCCGTATGACAGCCTGCGGTGGAGCCATTCGAATGGCCCTCGCAGGTTTTTCTTTTCTAGTAGGCAG GCCAGCAGCAGTGTGATCAG
Product: putative cation transport protein
Products: ADP; Orthophosphate. [C]
Alternate protein names: NA
Number of amino acids: Translated: 841; Mature: 841
Protein sequence:
>841_residues MWSVTDSPLDDAIQEAKSAAQKAGFDTETFAAVQSKEGRTSFAFELEGLGSASSVSELEEAIEQIEGVDAKIVYPSAMAW ISASRTLDPTLIVDAFQQHGVTATLTDSSLRRRLAWTDVEEGRYRRARARRFGSRVDEESRRFEIARREGFLHKRDETTR VVETTEVLFTARSLMTKARLFTSIACTIPVLAVSFWRELQFDYWQWALAALSLPVVLYGAWPFHRATIGGARRGMSALDS ASSVAILMAWGWSIVMMLFSSVGDPTYRAQPKWIAIDPTKFVSGALFFDVACGMTVILLAGRILVRRARSDLLEDLKRYR PNPSSTVTVVGKNRKTGEVRKEEVAIQKLNVGDDILIAPYALIPADGYVVGGASTIDGTALGIGRLKVKVNDHVYAGCVN GSNPLKIRVLQTGHRTWFAGITRWVSQASVHQNHADAVATRAASMLVPVSFVIAATDFALWALITNNLNQAFATALAVLG CVSPVALATSASLAMRKSIEDAARQGVLIQSGETLRVIDTVDTVIFNRVGALSKAGMSVEKVTADRGENPDLVLRVAGAL AMESDHPVSRALVRAAREARDASTDDSIPGWIDVTHSEIDEEGSFRGFVELPVGEEARSVEAVLWRPRSLSALDGRLAAA AESGSSPLVVRWKNKDRGVITLFNAVKDDAVDAVDDLEAQGIETMMLSRDTYPVARRYGDSVGVSHVLAGIQPGQKPQTV RSVRNHGATIAVVGDDSINDCFRVANVGILIDAMSKSSAAIEHPVANVIMLKNDVAPIPRLFTFARRLNRRIRSNLGFAW VYNVAAIVAAISGVLHPMIASLFMLGATIVIEVRSTWTRNL
Sequences:
>Translated_841_residues MWSVTDSPLDDAIQEAKSAAQKAGFDTETFAAVQSKEGRTSFAFELEGLGSASSVSELEEAIEQIEGVDAKIVYPSAMAW ISASRTLDPTLIVDAFQQHGVTATLTDSSLRRRLAWTDVEEGRYRRARARRFGSRVDEESRRFEIARREGFLHKRDETTR VVETTEVLFTARSLMTKARLFTSIACTIPVLAVSFWRELQFDYWQWALAALSLPVVLYGAWPFHRATIGGARRGMSALDS ASSVAILMAWGWSIVMMLFSSVGDPTYRAQPKWIAIDPTKFVSGALFFDVACGMTVILLAGRILVRRARSDLLEDLKRYR PNPSSTVTVVGKNRKTGEVRKEEVAIQKLNVGDDILIAPYALIPADGYVVGGASTIDGTALGIGRLKVKVNDHVYAGCVN GSNPLKIRVLQTGHRTWFAGITRWVSQASVHQNHADAVATRAASMLVPVSFVIAATDFALWALITNNLNQAFATALAVLG CVSPVALATSASLAMRKSIEDAARQGVLIQSGETLRVIDTVDTVIFNRVGALSKAGMSVEKVTADRGENPDLVLRVAGAL AMESDHPVSRALVRAAREARDASTDDSIPGWIDVTHSEIDEEGSFRGFVELPVGEEARSVEAVLWRPRSLSALDGRLAAA AESGSSPLVVRWKNKDRGVITLFNAVKDDAVDAVDDLEAQGIETMMLSRDTYPVARRYGDSVGVSHVLAGIQPGQKPQTV RSVRNHGATIAVVGDDSINDCFRVANVGILIDAMSKSSAAIEHPVANVIMLKNDVAPIPRLFTFARRLNRRIRSNLGFAW VYNVAAIVAAISGVLHPMIASLFMLGATIVIEVRSTWTRNL >Mature_841_residues MWSVTDSPLDDAIQEAKSAAQKAGFDTETFAAVQSKEGRTSFAFELEGLGSASSVSELEEAIEQIEGVDAKIVYPSAMAW ISASRTLDPTLIVDAFQQHGVTATLTDSSLRRRLAWTDVEEGRYRRARARRFGSRVDEESRRFEIARREGFLHKRDETTR VVETTEVLFTARSLMTKARLFTSIACTIPVLAVSFWRELQFDYWQWALAALSLPVVLYGAWPFHRATIGGARRGMSALDS ASSVAILMAWGWSIVMMLFSSVGDPTYRAQPKWIAIDPTKFVSGALFFDVACGMTVILLAGRILVRRARSDLLEDLKRYR PNPSSTVTVVGKNRKTGEVRKEEVAIQKLNVGDDILIAPYALIPADGYVVGGASTIDGTALGIGRLKVKVNDHVYAGCVN GSNPLKIRVLQTGHRTWFAGITRWVSQASVHQNHADAVATRAASMLVPVSFVIAATDFALWALITNNLNQAFATALAVLG CVSPVALATSASLAMRKSIEDAARQGVLIQSGETLRVIDTVDTVIFNRVGALSKAGMSVEKVTADRGENPDLVLRVAGAL AMESDHPVSRALVRAAREARDASTDDSIPGWIDVTHSEIDEEGSFRGFVELPVGEEARSVEAVLWRPRSLSALDGRLAAA AESGSSPLVVRWKNKDRGVITLFNAVKDDAVDAVDDLEAQGIETMMLSRDTYPVARRYGDSVGVSHVLAGIQPGQKPQTV RSVRNHGATIAVVGDDSINDCFRVANVGILIDAMSKSSAAIEHPVANVIMLKNDVAPIPRLFTFARRLNRRIRSNLGFAW VYNVAAIVAAISGVLHPMIASLFMLGATIVIEVRSTWTRNL
Specific function: Involved In Copper Efflux. [C]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=677, Percent_Identity=23.781388478582, Blast_Score=154, Evalue=4e-37, Organism=Homo sapiens, GI55743073, Length=572, Percent_Identity=23.7762237762238, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI115529486, Length=404, Percent_Identity=21.2871287128713, Blast_Score=94, Evalue=5e-19, Organism=Escherichia coli, GI1786691, Length=632, Percent_Identity=24.2088607594937, Blast_Score=126, Evalue=7e-30, Organism=Escherichia coli, GI1789879, Length=519, Percent_Identity=25.0481695568401, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17556548, Length=697, Percent_Identity=24.6771879483501, Blast_Score=118, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6320475, Length=934, Percent_Identity=23.0192719486081, Blast_Score=156, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6319772, Length=592, Percent_Identity=23.1418918918919, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI221329854, Length=588, Percent_Identity=20.9183673469388, Blast_Score=83, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR006403 - InterPro: IPR000579 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]
EC number: 3.6.3.4 [C]
Molecular weight: Translated: 91405; Mature: 91405
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWSVTDSPLDDAIQEAKSAAQKAGFDTETFAAVQSKEGRTSFAFELEGLGSASSVSELEE CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHH AIEQIEGVDAKIVYPSAMAWISASRTLDPTLIVDAFQQHGVTATLTDSSLRRRLAWTDVE HHHHHCCCCEEEECCHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCH EGRYRRARARRFGSRVDEESRRFEIARREGFLHKRDETTRVVETTEVLFTARSLMTKARL HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FTSIACTIPVLAVSFWRELQFDYWQWALAALSLPVVLYGAWPFHRATIGGARRGMSALDS HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCEEEEECCCHHHHHHCHHHHCHHHHCC ASSVAILMAWGWSIVMMLFSSVGDPTYRAQPKWIAIDPTKFVSGALFFDVACGMTVILLA CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHH GRILVRRARSDLLEDLKRYRPNPSSTVTVVGKNRKTGEVRKEEVAIQKLNVGDDILIAPY HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHEECCCCCEEECCE ALIPADGYVVGGASTIDGTALGIGRLKVKVNDHVYAGCVNGSNPLKIRVLQTGHRTWFAG EEECCCCEEECCCCCCCCCEEEEEEEEEEECCEEEEEEECCCCCEEEEEEECCCHHHHHH ITRWVSQASVHQNHADAVATRAASMLVPVSFVIAATDFALWALITNNLNQAFATALAVLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH CVSPVALATSASLAMRKSIEDAARQGVLIQSGETLRVIDTVDTVIFNRVGALSKAGMSVE HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEHHHHHHHHHHHHHHHHHCCCCHH KVTADRGENPDLVLRVAGALAMESDHPVSRALVRAAREARDASTDDSIPGWIDVTHSEID HHHHCCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHCC EEGSFRGFVELPVGEEARSVEAVLWRPRSLSALDGRLAAAAESGSSPLVVRWKNKDRGVI CCCCCCEEEECCCCCCHHHHHHHHCCCCCCHHHCCHHHHHHCCCCCCEEEEECCCCCCEE TLFNAVKDDAVDAVDDLEAQGIETMMLSRDTYPVARRYGDSVGVSHVLAGIQPGQKPQTV EEEHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHCCCCCCHHHHHHCCCCCCCCHHH RSVRNHGATIAVVGDDSINDCFRVANVGILIDAMSKSSAAIEHPVANVIMLKNDVAPIPR HHHHHCCCEEEEECCCCHHHHHHHHCCCEEEEECCCCCCHHHCCCCEEEEEECCCCCHHH LFTFARRLNRRIRSNLGFAWVYNVAAIVAAISGVLHPMIASLFMLGATIVIEVRSTWTRN HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHCCC L C >Mature Secondary Structure MWSVTDSPLDDAIQEAKSAAQKAGFDTETFAAVQSKEGRTSFAFELEGLGSASSVSELEE CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHH AIEQIEGVDAKIVYPSAMAWISASRTLDPTLIVDAFQQHGVTATLTDSSLRRRLAWTDVE HHHHHCCCCEEEECCHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCH EGRYRRARARRFGSRVDEESRRFEIARREGFLHKRDETTRVVETTEVLFTARSLMTKARL HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FTSIACTIPVLAVSFWRELQFDYWQWALAALSLPVVLYGAWPFHRATIGGARRGMSALDS HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCEEEEECCCHHHHHHCHHHHCHHHHCC ASSVAILMAWGWSIVMMLFSSVGDPTYRAQPKWIAIDPTKFVSGALFFDVACGMTVILLA CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHH GRILVRRARSDLLEDLKRYRPNPSSTVTVVGKNRKTGEVRKEEVAIQKLNVGDDILIAPY HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHEECCCCCEEECCE ALIPADGYVVGGASTIDGTALGIGRLKVKVNDHVYAGCVNGSNPLKIRVLQTGHRTWFAG EEECCCCEEECCCCCCCCCEEEEEEEEEEECCEEEEEEECCCCCEEEEEEECCCHHHHHH ITRWVSQASVHQNHADAVATRAASMLVPVSFVIAATDFALWALITNNLNQAFATALAVLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH CVSPVALATSASLAMRKSIEDAARQGVLIQSGETLRVIDTVDTVIFNRVGALSKAGMSVE HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEHHHHHHHHHHHHHHHHHCCCCHH KVTADRGENPDLVLRVAGALAMESDHPVSRALVRAAREARDASTDDSIPGWIDVTHSEID HHHHCCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHCC EEGSFRGFVELPVGEEARSVEAVLWRPRSLSALDGRLAAAAESGSSPLVVRWKNKDRGVI CCCCCCEEEECCCCCCHHHHHHHHCCCCCCHHHCCHHHHHHCCCCCCEEEEECCCCCCEE TLFNAVKDDAVDAVDDLEAQGIETMMLSRDTYPVARRYGDSVGVSHVLAGIQPGQKPQTV EEEHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHCCCCCCHHHHHHCCCCCCCCHHH RSVRNHGATIAVVGDDSINDCFRVANVGILIDAMSKSSAAIEHPVANVIMLKNDVAPIPR HHHHHCCCEEEEECCCCHHHHHHHHCCCEEEEECCCCCCHHHCCCCEEEEEECCCCCHHH LFTFARRLNRRIRSNLGFAWVYNVAAIVAAISGVLHPMIASLFMLGATIVIEVRSTWTRN HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHCCC L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Cu [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O [C]
Specific reaction: ATP + H2O = ADP + Orthophosphate. [C]
General reaction: Phosphorous acid anhydride hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]