| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is senX3 [H]
Identifier: 38233004
GI number: 38233004
Start: 357293
End: 358447
Strand: Direct
Name: senX3 [H]
Synonym: DIP0390
Alternate gene names: 38233004
Gene position: 357293-358447 (Clockwise)
Preceding gene: 38233003
Following gene: 38233005
Centisome position: 14.36
GC content: 54.29
Gene sequence:
>1155_bases GTGTACGTCGTTATCGCATTTGTGTTGGGCGTGGTCCTTTCGGGCCTCGCCCTACCTGCGTTGAAATGGGTGCGCGGCCG TAGTTATCGAACGGCGAAAAAGGGGGATAATAAGGTCACCACTGTGAGCCAGATGCTGCATTTGACGGTGCAGGGCTCGC CCACGGGTATGGCGGTGATCGACGCTACGGGGGCCGTTTTATTGTCTAATGTACGTTCCCACGAGATGGGGATTGTGCAT GAGCGCACGCTTAATCCGGATATTTGGGAGCTTGCGCAAGAAGCTTATAAAGACCAAGAGACTCATGCGATTGAGTTGGT GATCGACGAGCGGCGTAATCGCATTACGTCGGTGCGTGCGGTGGTTAAGCCGCTGACGCTTGTCGACAACCGCTACGTGG TCATTTACAGCACGGATGAGTCGGAAAACCAGCGCATGGAAGCGGCACGTCGTGACTTTGTGGCTAACGTGTCCCATGAG CTGAAAACTCCTGTGGGTGGCATGGCGTTGCTGGCGGAGGCCATCACGGAGGCCTCTGATGATCAAGAGCAGGTGGAATA CTTTGGTAATCGCCTGTACAAAGAGGCCCACCGTCTTGCCGACATGATTAATGAGCTCATCTCGCTGTCCAAGCTGCAAG GTGCTGAGGCGTTGCCGGATCTAGAGCCGGTGAGTGTGGATCGTGTGATCGACGAGGCACTGGCACGCAATGTGTTGGCC GCCGATAATGCGGGCATTGAGCTCAACCGTGGCAAACCATGCAATGCGATGGTGATGGGGGATATGACGCTGCTGGTCAC GGCGGTGTCCAACCTGATTAGCAACGCTATTAATTATTCGCCACAGGGAATGCCCATTTCGGTGGCAACCAAGATTTCGC GGGATGGCCGTGTTCTTATCCGAGTGATCGATAATGGCATTGGCATTTCAGTGGAGAATCAAAAACGAGTGTTTGAGCGC TTCTTCCGTGTAGATAAAGCGCGGTCACGTTCTACAGGTGGTACGGGATTAGGGCTTGCGATTGTCAAGCATGTGGCAGC TAATCACGGTGGCGATGTCACGCTGTGGTCGCGTCCTGGAACCGGTTCCACGTTTACGATCGAGCTTCCGATCTATCATG AAACTGACACGGGTCGCCGAAAGGATAAGAACTGA
Upstream 100 bases:
>100_bases GCACGGTGCTCAACCCAGGTGGCACCTACCTTGACCCAGAAGCTGCTGCTGCCGGTGCTGCCGCAGTTGCTGCTCAGGGC GCTAAGTAGTAGCGAGGCAC
Downstream 100 bases:
>100_bases TGACCTCTATCTTGTTGGTTGAAGACGAAGAGTCGCTAGCCGATCCCCTCGCGTTCTTGTTGCGCAAGGAAGGTTTTGAT GTAGTAATCGCCGGTGATGG
Product: putative two component system sensor kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MYVVIAFVLGVVLSGLALPALKWVRGRSYRTAKKGDNKVTTVSQMLHLTVQGSPTGMAVIDATGAVLLSNVRSHEMGIVH ERTLNPDIWELAQEAYKDQETHAIELVIDERRNRITSVRAVVKPLTLVDNRYVVIYSTDESENQRMEAARRDFVANVSHE LKTPVGGMALLAEAITEASDDQEQVEYFGNRLYKEAHRLADMINELISLSKLQGAEALPDLEPVSVDRVIDEALARNVLA ADNAGIELNRGKPCNAMVMGDMTLLVTAVSNLISNAINYSPQGMPISVATKISRDGRVLIRVIDNGIGISVENQKRVFER FFRVDKARSRSTGGTGLGLAIVKHVAANHGGDVTLWSRPGTGSTFTIELPIYHETDTGRRKDKN
Sequences:
>Translated_384_residues MYVVIAFVLGVVLSGLALPALKWVRGRSYRTAKKGDNKVTTVSQMLHLTVQGSPTGMAVIDATGAVLLSNVRSHEMGIVH ERTLNPDIWELAQEAYKDQETHAIELVIDERRNRITSVRAVVKPLTLVDNRYVVIYSTDESENQRMEAARRDFVANVSHE LKTPVGGMALLAEAITEASDDQEQVEYFGNRLYKEAHRLADMINELISLSKLQGAEALPDLEPVSVDRVIDEALARNVLA ADNAGIELNRGKPCNAMVMGDMTLLVTAVSNLISNAINYSPQGMPISVATKISRDGRVLIRVIDNGIGISVENQKRVFER FFRVDKARSRSTGGTGLGLAIVKHVAANHGGDVTLWSRPGTGSTFTIELPIYHETDTGRRKDKN >Mature_384_residues MYVVIAFVLGVVLSGLALPALKWVRGRSYRTAKKGDNKVTTVSQMLHLTVQGSPTGMAVIDATGAVLLSNVRSHEMGIVH ERTLNPDIWELAQEAYKDQETHAIELVIDERRNRITSVRAVVKPLTLVDNRYVVIYSTDESENQRMEAARRDFVANVSHE LKTPVGGMALLAEAITEASDDQEQVEYFGNRLYKEAHRLADMINELISLSKLQGAEALPDLEPVSVDRVIDEALARNVLA ADNAGIELNRGKPCNAMVMGDMTLLVTAVSNLISNAINYSPQGMPISVATKISRDGRVLIRVIDNGIGISVENQKRVFER FFRVDKARSRSTGGTGLGLAIVKHVAANHGGDVTLWSRPGTGSTFTIELPIYHETDTGRRKDKN
Specific function: Part of the two-component regulatory system senX3/regX3. Phosphorylates regX3 under conditions of phosphate limitation. Probably does not itself sense phosphate concentrations, which may be relayed to senX3 by the pstSCAB phosphate transporter system [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=269, Percent_Identity=33.0855018587361, Blast_Score=131, Evalue=9e-32, Organism=Escherichia coli, GI1790346, Length=233, Percent_Identity=32.618025751073, Blast_Score=118, Evalue=8e-28, Organism=Escherichia coli, GI1789149, Length=234, Percent_Identity=32.0512820512821, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI48994928, Length=242, Percent_Identity=30.1652892561983, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1786783, Length=228, Percent_Identity=33.3333333333333, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1788393, Length=234, Percent_Identity=29.9145299145299, Blast_Score=101, Evalue=7e-23, Organism=Escherichia coli, GI1788713, Length=268, Percent_Identity=26.1194029850746, Blast_Score=99, Evalue=6e-22, Organism=Escherichia coli, GI145693157, Length=392, Percent_Identity=25.5102040816327, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1788549, Length=252, Percent_Identity=29.3650793650794, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1787894, Length=233, Percent_Identity=30.0429184549356, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI87082128, Length=230, Percent_Identity=28.2608695652174, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1790436, Length=235, Percent_Identity=29.7872340425532, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1788279, Length=222, Percent_Identity=28.8288288288288, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790861, Length=206, Percent_Identity=29.126213592233, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI87081816, Length=265, Percent_Identity=27.5471698113208, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1786912, Length=253, Percent_Identity=25.6916996047431, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1789403, Length=209, Percent_Identity=27.7511961722488, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1789808, Length=228, Percent_Identity=28.5087719298246, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790551, Length=226, Percent_Identity=29.646017699115, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1790300, Length=306, Percent_Identity=26.1437908496732, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 42169; Mature: 42169
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVVIAFVLGVVLSGLALPALKWVRGRSYRTAKKGDNKVTTVSQMLHLTVQGSPTGMAVI CEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEEEEECCCCCEEEE DATGAVLLSNVRSHEMGIVHERTLNPDIWELAQEAYKDQETHAIELVIDERRNRITSVRA ECCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHH VVKPLTLVDNRYVVIYSTDESENQRMEAARRDFVANVSHELKTPVGGMALLAEAITEASD HHHHHHEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC DQEQVEYFGNRLYKEAHRLADMINELISLSKLQGAEALPDLEPVSVDRVIDEALARNVLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH ADNAGIELNRGKPCNAMVMGDMTLLVTAVSNLISNAINYSPQGMPISVATKISRDGRVLI CCCCCEEECCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEE RVIDNGIGISVENQKRVFERFFRVDKARSRSTGGTGLGLAIVKHVAANHGGDVTLWSRPG EEECCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCC TGSTFTIELPIYHETDTGRRKDKN CCCEEEEEEEEEECCCCCCCCCCC >Mature Secondary Structure MYVVIAFVLGVVLSGLALPALKWVRGRSYRTAKKGDNKVTTVSQMLHLTVQGSPTGMAVI CEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEEEEECCCCCEEEE DATGAVLLSNVRSHEMGIVHERTLNPDIWELAQEAYKDQETHAIELVIDERRNRITSVRA ECCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHH VVKPLTLVDNRYVVIYSTDESENQRMEAARRDFVANVSHELKTPVGGMALLAEAITEASD HHHHHHEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC DQEQVEYFGNRLYKEAHRLADMINELISLSKLQGAEALPDLEPVSVDRVIDEALARNVLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH ADNAGIELNRGKPCNAMVMGDMTLLVTAVSNLISNAINYSPQGMPISVATKISRDGRVLI CCCCCEEECCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEE RVIDNGIGISVENQKRVFERFFRVDKARSRSTGGTGLGLAIVKHVAANHGGDVTLWSRPG EEECCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCC TGSTFTIELPIYHETDTGRRKDKN CCCEEEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA