Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37681315

Identifier: 37681315

GI number: 37681315

Start: 3213225

End: 3215072

Strand: Direct

Name: 37681315

Synonym: VV3131

Alternate gene names: NA

Gene position: 3213225-3215072 (Clockwise)

Preceding gene: 37681311

Following gene: 37681316

Centisome position: 95.79

GC content: 50.6

Gene sequence:

>1848_bases
TTGCTGGTTTTGGACGCTGCCATGCCTGATAAATTTAATATGCAATCTCCCCCGTTTGATCGCTTGAGCGAGGGGCAACA
ACACCTTTTACGTTCTTCACTTGATGTGGCCTATTTTCGCACTAAAGATGTGGTGCTCGCCGCGGGGCAACCGTCACCGC
ATCTGCATATCTTAATCAAAGGCGCGGTTGAAGAACGCTCCGCCAACCAGCAAGAAGTGTTTGCTCACTACGCCAATGAC
GACATGTTTGATGTGCGCGCCTTGTTCGAGCCAACCGTACGTCATCAATATGTCGCGCTCGAAGATACCTTAAGCTATTT
GCTGCCCAAGGCCATTTTTCTCGAGCTATACAATGAAAACGGCCAATTCGCCGCTTATTTTGATAACAACCTCGCCAAGC
GCCAAGAGCTGATAGAGGCGGCGCAGCAGCAACAAAATCTTGCTGAGTTCATCCTCACCAAAGTTGATAAAGCCATCTAT
CATCCACCGAAGATTTTGTCGCCTGAGATGCCGATCAATCAGGTCACGCGCACACTTAAAGAGAACGGTATCGATGCCGC
CTTGGTACGCCTCCATGACGACGATGGGCGGTTACTCAACCATCCCAATGCACACCCTTATGCGATTGTCACCCGCACCA
ATATGCTCCACTCGGTGATGCTCGATGATAAGCCGCTCGACACTCCAGTGGGCGACATTGCCACCTTCCCCGTCTTCCAC
GTCGATGACGGTGATTTTCTCTTTAATGCGATGATCACCATGACGCGCAATCGTATGAAGCGCCTCATGGTGTGCGATGG
TCATCAAGCCGTGGGCATGTTGGACATGACGCAAATTCTCAGCGCCTTCTCCACCCATTCCCACGTGCTCACTTTGAGCA
TCGCGCGCGCCTCCAGTGTTGAAGAGCTGGCCTTAGCGTCGAATCGCCAGCGTCAGTTAGTGGAAAGTTTGCTGAAAAAC
GGCATTCGCACTCGCTTCATCATGGAGCTGATTTCTGCCGTCAATGAACAGATCATCGAGAAAGCCTTTGAGTTGGTTGT
TCCACCCGCCCTTCACGATCACTGTTGTTTGATCGTTTTAGGCTCAGAAGGTCGTGGGGAACAAATCCTCAAAACCGACC
AAGACAACGCGCTGATCATCAAAGATGGTTTGGAATGGCAACAAAGCGGCGTGGTGATGCAACAACTGACACACACCTTG
CAGCAACTTGGCTATCCGCTCTGTCCGGGCAATGTGATGGTCAATAACCCTAAGTGGGTCAAAAGTCAGAGTGATTGGCG
CAAAACCCTCACCGCATGGGTACGCAGTGCCAAACCAGAAACGGTGATGGATTTAGCGATTTTTGCCGATGCGCATGCCG
TTGCGGGCAATAAGGCATTGCTTGAGCCTGTGAAACAGCACCTCTCCGAGTTGATGGCGGATCAAGAACTGATTTTGACC
GAGTTCACTCGGCCTGCATTGAACTTTTCAGTTCCCCTCACCCTTTTTGGCAACGTCAAGGCCGACAAAAGCGGCCTCGA
CATCAAACAAGGCGGCATCTTTCCTATCGTGCACGGCATTCGAGCCCTGAGCTTGGAATACGCGCTACATGACAACAACA
CCTTCGACCGCATTGAGGGGTTAGTGGCACGTAACGTGTTGGAAAAAAGCACGGCCGCAAACCTAAGCGAAGCACTCAAG
TTGTTTTTTAAATTGCGCCTAGCACAGCAACTGACAGAGCAGCACAGTAATAACAAACTCAACTTAAAACTGCTGGATCG
CACGGAGCGAGATTTACTGCGCCACAGTTTGCACGTGGTGAAAAAGTTCAAACAGTGGCTGGGTTATCACTACCAAATCA
AAGATTAA

Upstream 100 bases:

>100_bases
TCCGCGACAGATTGTTTCCTCTAATCGGCCTAATTGGAGTGAATTAGACCAAAGTCGTCTGGAGAGTCAGGAGAATTTTG
TCAGACTTAGAGCATATGCC

Downstream 100 bases:

>100_bases
CCAACGCAAAACATCGAATCACGACCAAAGGCTATACGGCTAAGGTCTTAATGAAATAGGAATGTGTATGAACTGGTTTC
GGCGCAACTACTGGTACTAC

Product: signal-transduction protein

Products: NA

Alternate protein names: Signal-Transduction Protein; Nucleotidyltransferase; Signal Transduction Protein; Signal Transduction Protein With CBS Domains; Signal-Transduction Protein With CBS Domains; Nucleotidyltransferase Family; CBS Domain Protein; Signal Protein; Inosine-5-Monophosphate Dehydrogenase; Nucleotidyltransferase Domain Family Protein; DNA Polymerase III Subunit Epsilon; CBS Signal-Transduction Protein; Cyclic-Nucleotide Signal Transduction Protein; Multidomain-Containing Protein; Cyclic Nucleotide-Regulated Nucleotidyltransferase; Methyl-Accepting Chemotaxis Protein A; Nucleotidyltransferases

Number of amino acids: Translated: 615; Mature: 615

Protein sequence:

>615_residues
MLVLDAAMPDKFNMQSPPFDRLSEGQQHLLRSSLDVAYFRTKDVVLAAGQPSPHLHILIKGAVEERSANQQEVFAHYAND
DMFDVRALFEPTVRHQYVALEDTLSYLLPKAIFLELYNENGQFAAYFDNNLAKRQELIEAAQQQQNLAEFILTKVDKAIY
HPPKILSPEMPINQVTRTLKENGIDAALVRLHDDDGRLLNHPNAHPYAIVTRTNMLHSVMLDDKPLDTPVGDIATFPVFH
VDDGDFLFNAMITMTRNRMKRLMVCDGHQAVGMLDMTQILSAFSTHSHVLTLSIARASSVEELALASNRQRQLVESLLKN
GIRTRFIMELISAVNEQIIEKAFELVVPPALHDHCCLIVLGSEGRGEQILKTDQDNALIIKDGLEWQQSGVVMQQLTHTL
QQLGYPLCPGNVMVNNPKWVKSQSDWRKTLTAWVRSAKPETVMDLAIFADAHAVAGNKALLEPVKQHLSELMADQELILT
EFTRPALNFSVPLTLFGNVKADKSGLDIKQGGIFPIVHGIRALSLEYALHDNNTFDRIEGLVARNVLEKSTAANLSEALK
LFFKLRLAQQLTEQHSNNKLNLKLLDRTERDLLRHSLHVVKKFKQWLGYHYQIKD

Sequences:

>Translated_615_residues
MLVLDAAMPDKFNMQSPPFDRLSEGQQHLLRSSLDVAYFRTKDVVLAAGQPSPHLHILIKGAVEERSANQQEVFAHYAND
DMFDVRALFEPTVRHQYVALEDTLSYLLPKAIFLELYNENGQFAAYFDNNLAKRQELIEAAQQQQNLAEFILTKVDKAIY
HPPKILSPEMPINQVTRTLKENGIDAALVRLHDDDGRLLNHPNAHPYAIVTRTNMLHSVMLDDKPLDTPVGDIATFPVFH
VDDGDFLFNAMITMTRNRMKRLMVCDGHQAVGMLDMTQILSAFSTHSHVLTLSIARASSVEELALASNRQRQLVESLLKN
GIRTRFIMELISAVNEQIIEKAFELVVPPALHDHCCLIVLGSEGRGEQILKTDQDNALIIKDGLEWQQSGVVMQQLTHTL
QQLGYPLCPGNVMVNNPKWVKSQSDWRKTLTAWVRSAKPETVMDLAIFADAHAVAGNKALLEPVKQHLSELMADQELILT
EFTRPALNFSVPLTLFGNVKADKSGLDIKQGGIFPIVHGIRALSLEYALHDNNTFDRIEGLVARNVLEKSTAANLSEALK
LFFKLRLAQQLTEQHSNNKLNLKLLDRTERDLLRHSLHVVKKFKQWLGYHYQIKD
>Mature_615_residues
MLVLDAAMPDKFNMQSPPFDRLSEGQQHLLRSSLDVAYFRTKDVVLAAGQPSPHLHILIKGAVEERSANQQEVFAHYAND
DMFDVRALFEPTVRHQYVALEDTLSYLLPKAIFLELYNENGQFAAYFDNNLAKRQELIEAAQQQQNLAEFILTKVDKAIY
HPPKILSPEMPINQVTRTLKENGIDAALVRLHDDDGRLLNHPNAHPYAIVTRTNMLHSVMLDDKPLDTPVGDIATFPVFH
VDDGDFLFNAMITMTRNRMKRLMVCDGHQAVGMLDMTQILSAFSTHSHVLTLSIARASSVEELALASNRQRQLVESLLKN
GIRTRFIMELISAVNEQIIEKAFELVVPPALHDHCCLIVLGSEGRGEQILKTDQDNALIIKDGLEWQQSGVVMQQLTHTL
QQLGYPLCPGNVMVNNPKWVKSQSDWRKTLTAWVRSAKPETVMDLAIFADAHAVAGNKALLEPVKQHLSELMADQELILT
EFTRPALNFSVPLTLFGNVKADKSGLDIKQGGIFPIVHGIRALSLEYALHDNNTFDRIEGLVARNVLEKSTAANLSEALK
LFFKLRLAQQLTEQHSNNKLNLKLLDRTERDLLRHSLHVVKKFKQWLGYHYQIKD

Specific function: Unknown

COG id: COG2905

COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69466; Mature: 69466

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLDAAMPDKFNMQSPPFDRLSEGQQHLLRSSLDVAYFRTKDVVLAAGQPSPHLHILIK
CEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCCCCEEEEEE
GAVEERSANQQEVFAHYANDDMFDVRALFEPTVRHQYVALEDTLSYLLPKAIFLELYNEN
ECHHHCCCCHHHHHHHHCCCCHHHHHHHHCHHHHHHEEHHHHHHHHHHHHHHHHHHCCCC
GQFAAYFDNNLAKRQELIEAAQQQQNLAEFILTKVDKAIYHPPKILSPEMPINQVTRTLK
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
ENGIDAALVRLHDDDGRLLNHPNAHPYAIVTRTNMLHSVMLDDKPLDTPVGDIATFPVFH
HCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCHHCCCEEE
VDDGDFLFNAMITMTRNRMKRLMVCDGHQAVGMLDMTQILSAFSTHSHVLTLSIARASSV
ECCCHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEHHHCCH
EELALASNRQRQLVESLLKNGIRTRFIMELISAVNEQIIEKAFELVVPPALHDHCCLIVL
HHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
GSEGRGEQILKTDQDNALIIKDGLEWQQSGVVMQQLTHTLQQLGYPLCPGNVMVNNPKWV
CCCCCCCCCEECCCCCEEEEECCCCHHHCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCC
KSQSDWRKTLTAWVRSAKPETVMDLAIFADAHAVAGNKALLEPVKQHLSELMADQELILT
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHH
EFTRPALNFSVPLTLFGNVKADKSGLDIKQGGIFPIVHGIRALSLEYALHDNNTFDRIEG
HHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEECCCCHHHHHHH
LVARNVLEKSTAANLSEALKLFFKLRLAQQLTEQHSNNKLNLKLLDRTERDLLRHSLHVV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHH
KKFKQWLGYHYQIKD
HHHHHHCCCEEEECC
>Mature Secondary Structure
MLVLDAAMPDKFNMQSPPFDRLSEGQQHLLRSSLDVAYFRTKDVVLAAGQPSPHLHILIK
CEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCCCCEEEEEE
GAVEERSANQQEVFAHYANDDMFDVRALFEPTVRHQYVALEDTLSYLLPKAIFLELYNEN
ECHHHCCCCHHHHHHHHCCCCHHHHHHHHCHHHHHHEEHHHHHHHHHHHHHHHHHHCCCC
GQFAAYFDNNLAKRQELIEAAQQQQNLAEFILTKVDKAIYHPPKILSPEMPINQVTRTLK
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
ENGIDAALVRLHDDDGRLLNHPNAHPYAIVTRTNMLHSVMLDDKPLDTPVGDIATFPVFH
HCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCHHCCCEEE
VDDGDFLFNAMITMTRNRMKRLMVCDGHQAVGMLDMTQILSAFSTHSHVLTLSIARASSV
ECCCHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEHHHCCH
EELALASNRQRQLVESLLKNGIRTRFIMELISAVNEQIIEKAFELVVPPALHDHCCLIVL
HHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
GSEGRGEQILKTDQDNALIIKDGLEWQQSGVVMQQLTHTLQQLGYPLCPGNVMVNNPKWV
CCCCCCCCCEECCCCCEEEEECCCCHHHCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCC
KSQSDWRKTLTAWVRSAKPETVMDLAIFADAHAVAGNKALLEPVKQHLSELMADQELILT
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHH
EFTRPALNFSVPLTLFGNVKADKSGLDIKQGGIFPIVHGIRALSLEYALHDNNTFDRIEG
HHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEECCCCHHHHHHH
LVARNVLEKSTAANLSEALKLFFKLRLAQQLTEQHSNNKLNLKLLDRTERDLLRHSLHVV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHH
KKFKQWLGYHYQIKD
HHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA