| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37681311
Identifier: 37681311
GI number: 37681311
Start: 3207747
End: 3208208
Strand: Direct
Name: 37681311
Synonym: VV3127
Alternate gene names: NA
Gene position: 3207747-3208208 (Clockwise)
Preceding gene: 37681310
Following gene: 37681315
Centisome position: 95.63
GC content: 32.03
Gene sequence:
>462_bases ATGGACATATTTAAACAAAAAACATATGACTTAACACCAAAAATTCACGGGAGAATTTTTAATCATGGTATCCTTGCGGA AAATATTGAAGTCACCCTTGAAATCAGTGCTCTGAATGACACAAAAGAATTAAAGGCATATACTAATCAAAATGGTGAGT TCTTTTTTGAAGCTGTCAGTATTTCAACAATAAAGACACCAAGCATTTTTGACCCCAAAATGGTCAGCACATCATTAAGC ATAAAACGTGACCTTGAATACAAATACTTATGGCGTTCATATTTACCTGGATATAGCATATTTACTTTCATGTCAGAAAA TTTATCCAATCTCACTTGCGACATTAATTCAAAAGAGAAATATTTTATATTTGATGCTAAGAAAAAAGATCATGATGGGT ATGAAGTTCATACTATCTGCGACCTTCATGGTGCATTAGAGTCAGGATATATAGAGAATTAA
Upstream 100 bases:
>100_bases TAATGGATATAAGCGTAGAGAAAAAAGGCAAAAGGATTAAAAAGGCAATACATCATTTAATAATACTTTTTTCTTAACCG TCTCCTACCAGGTCTACGTC
Downstream 100 bases:
>100_bases GCAGGTGATCATTATTGGCGTATCAACACAACTTTTTTCTTAGCCAAGACATTCACAAAGAGCTGCCATTTTAATACCAA CCATGGCAGCTCTTTTTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MDIFKQKTYDLTPKIHGRIFNHGILAENIEVTLEISALNDTKELKAYTNQNGEFFFEAVSISTIKTPSIFDPKMVSTSLS IKRDLEYKYLWRSYLPGYSIFTFMSENLSNLTCDINSKEKYFIFDAKKKDHDGYEVHTICDLHGALESGYIEN
Sequences:
>Translated_153_residues MDIFKQKTYDLTPKIHGRIFNHGILAENIEVTLEISALNDTKELKAYTNQNGEFFFEAVSISTIKTPSIFDPKMVSTSLS IKRDLEYKYLWRSYLPGYSIFTFMSENLSNLTCDINSKEKYFIFDAKKKDHDGYEVHTICDLHGALESGYIEN >Mature_153_residues MDIFKQKTYDLTPKIHGRIFNHGILAENIEVTLEISALNDTKELKAYTNQNGEFFFEAVSISTIKTPSIFDPKMVSTSLS IKRDLEYKYLWRSYLPGYSIFTFMSENLSNLTCDINSKEKYFIFDAKKKDHDGYEVHTICDLHGALESGYIEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17700; Mature: 17700
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIFKQKTYDLTPKIHGRIFNHGILAENIEVTLEISALNDTKELKAYTNQNGEFFFEAVS CCCCCCCCCCCCCCCCCEEECCCEEECCEEEEEEEEECCCCHHHHHHHCCCCEEEEEEEE ISTIKTPSIFDPKMVSTSLSIKRDLEYKYLWRSYLPGYSIFTFMSENLSNLTCDINSKEK EEEECCCCCCCCCHHEEECCEEECCCHHHHHHHHCCCCCEEHHHHCCCCEEEEEECCCCE YFIFDAKKKDHDGYEVHTICDLHGALESGYIEN EEEEECCCCCCCCEEEEEEEEHHHHHCCCCCCC >Mature Secondary Structure MDIFKQKTYDLTPKIHGRIFNHGILAENIEVTLEISALNDTKELKAYTNQNGEFFFEAVS CCCCCCCCCCCCCCCCCEEECCCEEECCEEEEEEEEECCCCHHHHHHHCCCCEEEEEEEE ISTIKTPSIFDPKMVSTSLSIKRDLEYKYLWRSYLPGYSIFTFMSENLSNLTCDINSKEK EEEECCCCCCCCCHHEEECCEEECCCHHHHHHHHCCCCCEEHHHHCCCCEEEEEECCCCE YFIFDAKKKDHDGYEVHTICDLHGALESGYIEN EEEEECCCCCCCCEEEEEEEEHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA