Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

Click here to switch to the map view.

The map label for this gene is 37680130

Identifier: 37680130

GI number: 37680130

Start: 1934476

End: 1935459

Strand: Direct

Name: 37680130

Synonym: VV1946

Alternate gene names: NA

Gene position: 1934476-1935459 (Clockwise)

Preceding gene: 37680125

Following gene: 37680132

Centisome position: 57.67

GC content: 44.82

Gene sequence:

>984_bases
ATGAATAAGACTATTCTTTCTTTATCATTGAGCGGAGCTATATTACTTACCATTAGCGGTGATATCTACGCCGATGACTT
ATATGGACCAACGCGGAGTTACGCGCAATCACCGATGCAGTCAAACGCGTTAAGCAATGTTTTGAGAAACGCACGTTCAT
TGCCTGATGACTCGATAGAAGCTTACACCTCTCTCACTGCAGCGAGCGTTTGGGCGGAAACCAATGATTACATGCTGGAT
TACTATCACAATCAATTGGAAGTCGGCGCGAGATGGCAAGTTAACGAACAGTGGCAATGGGAGTTGAACTATCGCTGGAC
GTTTGCTGCGGACAACCATTTAGATAACCTTACGATTGCGTTCCATGATTTTTTTGGTATCGGGCAAAATGGCAGAGACA
CGGTCGATAAACACCGCTTTTATATCTCCATGCCGGAATACGGTGTTCATGAAGAGGGATTTGAAGGGGAAACGCTCAGC
AGCGCCATATCCACTTATGTGCAATATCAACTCTATCAAGATCAACACCACGCCTTATCTGTGGGAGGGAGCCTCTATTA
CAACGATGTAAACAGTGGGCCTTTCGAAGGCAGTAGTTTTGAACAAGGTTTACAACTCAATTACGGTTACCAAAAGGAGC
AACACGTAATTTACGCAATGTTTGGTATGACCCATCGCAACAAAGAAGTCTCAATTGCAGACATCCCCTACCGTAAAGAC
ACACTCGCTTTTGCGACCGGATACCGTTATGCCTTTACTCGCCAGCATCAAATTCTCGCGGAATACCATATCTATCAGGG
GGCGACTGAAGGCCCTGATGATTTTTCAGACCCATCAAATGAGTTTGTGTTGGGCTATCGTTATGTGATGGACAGTTCAG
CGCTCGAAGTTTTGATGATAGAAAACGCCAGAAATATGGACAACAGTACCGATATCGCGTTTACATTTGGATATCGCTAT
CTCTTCAAATCGCGCGCTGATTAA

Upstream 100 bases:

>100_bases
TTTCCTCCCAAGGAGGAAGCCCCCTTGCCTCTTGCACAACTCAATTCGCGCAGTAATCTAATAAAAAACAATGAGATTAT
TTCAGTAAGATCATATAGAT

Downstream 100 bases:

>100_bases
GTACATATCACGAACGGTTAGGCACTTAATACTGGCGCGATGGCTTGCGCGACTTGTGAGTCCGTTGCGTTTAATGGCAG
AGTGAATGAGCGGTACTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MNKTILSLSLSGAILLTISGDIYADDLYGPTRSYAQSPMQSNALSNVLRNARSLPDDSIEAYTSLTAASVWAETNDYMLD
YYHNQLEVGARWQVNEQWQWELNYRWTFAADNHLDNLTIAFHDFFGIGQNGRDTVDKHRFYISMPEYGVHEEGFEGETLS
SAISTYVQYQLYQDQHHALSVGGSLYYNDVNSGPFEGSSFEQGLQLNYGYQKEQHVIYAMFGMTHRNKEVSIADIPYRKD
TLAFATGYRYAFTRQHQILAEYHIYQGATEGPDDFSDPSNEFVLGYRYVMDSSALEVLMIENARNMDNSTDIAFTFGYRY
LFKSRAD

Sequences:

>Translated_327_residues
MNKTILSLSLSGAILLTISGDIYADDLYGPTRSYAQSPMQSNALSNVLRNARSLPDDSIEAYTSLTAASVWAETNDYMLD
YYHNQLEVGARWQVNEQWQWELNYRWTFAADNHLDNLTIAFHDFFGIGQNGRDTVDKHRFYISMPEYGVHEEGFEGETLS
SAISTYVQYQLYQDQHHALSVGGSLYYNDVNSGPFEGSSFEQGLQLNYGYQKEQHVIYAMFGMTHRNKEVSIADIPYRKD
TLAFATGYRYAFTRQHQILAEYHIYQGATEGPDDFSDPSNEFVLGYRYVMDSSALEVLMIENARNMDNSTDIAFTFGYRY
LFKSRAD
>Mature_327_residues
MNKTILSLSLSGAILLTISGDIYADDLYGPTRSYAQSPMQSNALSNVLRNARSLPDDSIEAYTSLTAASVWAETNDYMLD
YYHNQLEVGARWQVNEQWQWELNYRWTFAADNHLDNLTIAFHDFFGIGQNGRDTVDKHRFYISMPEYGVHEEGFEGETLS
SAISTYVQYQLYQDQHHALSVGGSLYYNDVNSGPFEGSSFEQGLQLNYGYQKEQHVIYAMFGMTHRNKEVSIADIPYRKD
TLAFATGYRYAFTRQHQILAEYHIYQGATEGPDDFSDPSNEFVLGYRYVMDSSALEVLMIENARNMDNSTDIAFTFGYRY
LFKSRAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37478; Mature: 37478

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTILSLSLSGAILLTISGDIYADDLYGPTRSYAQSPMQSNALSNVLRNARSLPDDSIE
CCCEEEEEEECCEEEEEEECCEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCHHH
AYTSLTAASVWAETNDYMLDYYHNQLEVGARWQVNEQWQWELNYRWTFAADNHLDNLTIA
HHHHHHHHHEEECCCCEEEEEECCEEEECCEEEECCCEEEEEEEEEEEEECCCCCCEEEE
FHDFFGIGQNGRDTVDKHRFYISMPEYGVHEEGFEGETLSSAISTYVQYQLYQDQHHALS
EEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCCEEE
VGGSLYYNDVNSGPFEGSSFEQGLQLNYGYQKEQHVIYAMFGMTHRNKEVSIADIPYRKD
ECCEEEEECCCCCCCCCCCHHCCCEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCC
TLAFATGYRYAFTRQHQILAEYHIYQGATEGPDDFSDPSNEFVLGYRYVMDSSALEVLMI
EEEEECCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEE
ENARNMDNSTDIAFTFGYRYLFKSRAD
ECCCCCCCCCCEEEEEEEEEEHHCCCC
>Mature Secondary Structure
MNKTILSLSLSGAILLTISGDIYADDLYGPTRSYAQSPMQSNALSNVLRNARSLPDDSIE
CCCEEEEEEECCEEEEEEECCEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCHHH
AYTSLTAASVWAETNDYMLDYYHNQLEVGARWQVNEQWQWELNYRWTFAADNHLDNLTIA
HHHHHHHHHEEECCCCEEEEEECCEEEECCEEEECCCEEEEEEEEEEEEECCCCCCEEEE
FHDFFGIGQNGRDTVDKHRFYISMPEYGVHEEGFEGETLSSAISTYVQYQLYQDQHHALS
EEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCCEEE
VGGSLYYNDVNSGPFEGSSFEQGLQLNYGYQKEQHVIYAMFGMTHRNKEVSIADIPYRKD
ECCEEEEECCCCCCCCCCCHHCCCEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCC
TLAFATGYRYAFTRQHQILAEYHIYQGATEGPDDFSDPSNEFVLGYRYVMDSSALEVLMI
EEEEECCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEE
ENARNMDNSTDIAFTFGYRYLFKSRAD
ECCCCCCCCCCEEEEEEEEEEHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA