| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37680130
Identifier: 37680130
GI number: 37680130
Start: 1934476
End: 1935459
Strand: Direct
Name: 37680130
Synonym: VV1946
Alternate gene names: NA
Gene position: 1934476-1935459 (Clockwise)
Preceding gene: 37680125
Following gene: 37680132
Centisome position: 57.67
GC content: 44.82
Gene sequence:
>984_bases ATGAATAAGACTATTCTTTCTTTATCATTGAGCGGAGCTATATTACTTACCATTAGCGGTGATATCTACGCCGATGACTT ATATGGACCAACGCGGAGTTACGCGCAATCACCGATGCAGTCAAACGCGTTAAGCAATGTTTTGAGAAACGCACGTTCAT TGCCTGATGACTCGATAGAAGCTTACACCTCTCTCACTGCAGCGAGCGTTTGGGCGGAAACCAATGATTACATGCTGGAT TACTATCACAATCAATTGGAAGTCGGCGCGAGATGGCAAGTTAACGAACAGTGGCAATGGGAGTTGAACTATCGCTGGAC GTTTGCTGCGGACAACCATTTAGATAACCTTACGATTGCGTTCCATGATTTTTTTGGTATCGGGCAAAATGGCAGAGACA CGGTCGATAAACACCGCTTTTATATCTCCATGCCGGAATACGGTGTTCATGAAGAGGGATTTGAAGGGGAAACGCTCAGC AGCGCCATATCCACTTATGTGCAATATCAACTCTATCAAGATCAACACCACGCCTTATCTGTGGGAGGGAGCCTCTATTA CAACGATGTAAACAGTGGGCCTTTCGAAGGCAGTAGTTTTGAACAAGGTTTACAACTCAATTACGGTTACCAAAAGGAGC AACACGTAATTTACGCAATGTTTGGTATGACCCATCGCAACAAAGAAGTCTCAATTGCAGACATCCCCTACCGTAAAGAC ACACTCGCTTTTGCGACCGGATACCGTTATGCCTTTACTCGCCAGCATCAAATTCTCGCGGAATACCATATCTATCAGGG GGCGACTGAAGGCCCTGATGATTTTTCAGACCCATCAAATGAGTTTGTGTTGGGCTATCGTTATGTGATGGACAGTTCAG CGCTCGAAGTTTTGATGATAGAAAACGCCAGAAATATGGACAACAGTACCGATATCGCGTTTACATTTGGATATCGCTAT CTCTTCAAATCGCGCGCTGATTAA
Upstream 100 bases:
>100_bases TTTCCTCCCAAGGAGGAAGCCCCCTTGCCTCTTGCACAACTCAATTCGCGCAGTAATCTAATAAAAAACAATGAGATTAT TTCAGTAAGATCATATAGAT
Downstream 100 bases:
>100_bases GTACATATCACGAACGGTTAGGCACTTAATACTGGCGCGATGGCTTGCGCGACTTGTGAGTCCGTTGCGTTTAATGGCAG AGTGAATGAGCGGTACTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MNKTILSLSLSGAILLTISGDIYADDLYGPTRSYAQSPMQSNALSNVLRNARSLPDDSIEAYTSLTAASVWAETNDYMLD YYHNQLEVGARWQVNEQWQWELNYRWTFAADNHLDNLTIAFHDFFGIGQNGRDTVDKHRFYISMPEYGVHEEGFEGETLS SAISTYVQYQLYQDQHHALSVGGSLYYNDVNSGPFEGSSFEQGLQLNYGYQKEQHVIYAMFGMTHRNKEVSIADIPYRKD TLAFATGYRYAFTRQHQILAEYHIYQGATEGPDDFSDPSNEFVLGYRYVMDSSALEVLMIENARNMDNSTDIAFTFGYRY LFKSRAD
Sequences:
>Translated_327_residues MNKTILSLSLSGAILLTISGDIYADDLYGPTRSYAQSPMQSNALSNVLRNARSLPDDSIEAYTSLTAASVWAETNDYMLD YYHNQLEVGARWQVNEQWQWELNYRWTFAADNHLDNLTIAFHDFFGIGQNGRDTVDKHRFYISMPEYGVHEEGFEGETLS SAISTYVQYQLYQDQHHALSVGGSLYYNDVNSGPFEGSSFEQGLQLNYGYQKEQHVIYAMFGMTHRNKEVSIADIPYRKD TLAFATGYRYAFTRQHQILAEYHIYQGATEGPDDFSDPSNEFVLGYRYVMDSSALEVLMIENARNMDNSTDIAFTFGYRY LFKSRAD >Mature_327_residues MNKTILSLSLSGAILLTISGDIYADDLYGPTRSYAQSPMQSNALSNVLRNARSLPDDSIEAYTSLTAASVWAETNDYMLD YYHNQLEVGARWQVNEQWQWELNYRWTFAADNHLDNLTIAFHDFFGIGQNGRDTVDKHRFYISMPEYGVHEEGFEGETLS SAISTYVQYQLYQDQHHALSVGGSLYYNDVNSGPFEGSSFEQGLQLNYGYQKEQHVIYAMFGMTHRNKEVSIADIPYRKD TLAFATGYRYAFTRQHQILAEYHIYQGATEGPDDFSDPSNEFVLGYRYVMDSSALEVLMIENARNMDNSTDIAFTFGYRY LFKSRAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37478; Mature: 37478
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTILSLSLSGAILLTISGDIYADDLYGPTRSYAQSPMQSNALSNVLRNARSLPDDSIE CCCEEEEEEECCEEEEEEECCEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCHHH AYTSLTAASVWAETNDYMLDYYHNQLEVGARWQVNEQWQWELNYRWTFAADNHLDNLTIA HHHHHHHHHEEECCCCEEEEEECCEEEECCEEEECCCEEEEEEEEEEEEECCCCCCEEEE FHDFFGIGQNGRDTVDKHRFYISMPEYGVHEEGFEGETLSSAISTYVQYQLYQDQHHALS EEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCCEEE VGGSLYYNDVNSGPFEGSSFEQGLQLNYGYQKEQHVIYAMFGMTHRNKEVSIADIPYRKD ECCEEEEECCCCCCCCCCCHHCCCEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCC TLAFATGYRYAFTRQHQILAEYHIYQGATEGPDDFSDPSNEFVLGYRYVMDSSALEVLMI EEEEECCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEE ENARNMDNSTDIAFTFGYRYLFKSRAD ECCCCCCCCCCEEEEEEEEEEHHCCCC >Mature Secondary Structure MNKTILSLSLSGAILLTISGDIYADDLYGPTRSYAQSPMQSNALSNVLRNARSLPDDSIE CCCEEEEEEECCEEEEEEECCEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCHHH AYTSLTAASVWAETNDYMLDYYHNQLEVGARWQVNEQWQWELNYRWTFAADNHLDNLTIA HHHHHHHHHEEECCCCEEEEEECCEEEECCEEEECCCEEEEEEEEEEEEECCCCCCEEEE FHDFFGIGQNGRDTVDKHRFYISMPEYGVHEEGFEGETLSSAISTYVQYQLYQDQHHALS EEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCCEEE VGGSLYYNDVNSGPFEGSSFEQGLQLNYGYQKEQHVIYAMFGMTHRNKEVSIADIPYRKD ECCEEEEECCCCCCCCCCCHHCCCEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCC TLAFATGYRYAFTRQHQILAEYHIYQGATEGPDDFSDPSNEFVLGYRYVMDSSALEVLMI EEEEECCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEE ENARNMDNSTDIAFTFGYRYLFKSRAD ECCCCCCCCCCEEEEEEEEEEHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA